RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 MST1RQ04912 1400 aa18.35■□□□□ 0.53
PHF20-201ENST00000339089 CADPS2Q86UW7 1296 aa18.34■□□□□ 0.53
PHF20-201ENST00000339089 ARHGEF28Q8N1W1 1705 aaKnown RBP18.34■□□□□ 0.53
PHF20-201ENST00000339089 ATF3P18847 181 aa18.33■□□□□ 0.52
PHF20-201ENST00000339089 GPRASP1Q5JY77 1395 aa18.32■□□□□ 0.52
PHF20-201ENST00000339089 CDC42BPGQ6DT37 1551 aa18.32■□□□□ 0.52
PHF20-201ENST00000339089 SAFB2Q14151 953 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHF20-201ENST00000339089 SCAF1Q9H7N4 1312 aaKnown RBP18.31■□□□□ 0.52
PHF20-201ENST00000339089 ROBO1Q9Y6N7 1651 aa18.3■□□□□ 0.52
PHF20-201ENST00000339089 TIMELESSQ9UNS1 1208 aa18.3■□□□□ 0.52
PHF20-201ENST00000339089 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
PHF20-201ENST00000339089 HSPA1LP34931 641 aa18.29■□□□□ 0.52
PHF20-201ENST00000339089 C1orf167Q5SNV9 1468 aa18.29■□□□□ 0.52
PHF20-201ENST00000339089 POGKQ9P215 609 aa18.28■□□□□ 0.52
PHF20-201ENST00000339089 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
PHF20-201ENST00000339089 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
PHF20-201ENST00000339089 BRINP3Q76B58 766 aa18.27■□□□□ 0.52
PHF20-201ENST00000339089 FMN2Q9NZ56 1722 aa18.26■□□□□ 0.51
PHF20-201ENST00000339089 MINK1Q8N4C8 1332 aaPredicted RBP18.25■□□□□ 0.51
PHF20-201ENST00000339089 ORAI2Q96SN7 254 aa18.24■□□□□ 0.51
PHF20-201ENST00000339089 HIRIP3Q9BW71 556 aaPredicted RBP18.24■□□□□ 0.51
PHF20-201ENST00000339089 USP32Q8NFA0 1604 aa18.22■□□□□ 0.51
PHF20-201ENST00000339089 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
PHF20-201ENST00000339089 CENPJQ9HC77 1338 aaPredicted RBP18.21■□□□□ 0.51
PHF20-201ENST00000339089 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
PHF20-201ENST00000339089 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.5
PHF20-201ENST00000339089 CARD11Q9BXL7 1154 aa18.21■□□□□ 0.5
PHF20-201ENST00000339089 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
PHF20-201ENST00000339089 DDX17Q92841 729 aaKnown RBP18.2■□□□□ 0.5
PHF20-201ENST00000339089 NHSL1Q5SYE7 1610 aa18.19■□□□□ 0.5
PHF20-201ENST00000339089 RGPD8O14715 1765 aaPredicted RBP18.19■□□□□ 0.5
PHF20-201ENST00000339089 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
PHF20-201ENST00000339089 COL16A1Q07092 1604 aaPredicted RBP18.18■□□□□ 0.5
PHF20-201ENST00000339089 PHLPP1O60346 1717 aa18.17■□□□□ 0.5
PHF20-201ENST00000339089 TULP4Q9NRJ4 1543 aa18.16■□□□□ 0.5
PHF20-201ENST00000339089 ANKARQ7Z5J8 1434 aa18.16■□□□□ 0.5
PHF20-201ENST00000339089 ESCO1Q5FWF5 840 aa18.16■□□□□ 0.5
PHF20-201ENST00000339089 CDK19Q9BWU1 502 aa18.16■□□□□ 0.5
PHF20-201ENST00000339089 ATP7BP35670 1465 aa18.15■□□□□ 0.5
PHF20-201ENST00000339089 EIF3AQ14152 1382 aaKnown RBP18.13■□□□□ 0.49
PHF20-201ENST00000339089 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
PHF20-201ENST00000339089 SOS2Q07890 1332 aaPredicted RBP18.12■□□□□ 0.49
PHF20-201ENST00000339089 FOXO3O43524 673 aa18.11■□□□□ 0.49
PHF20-201ENST00000339089 NUDT16Q96DE0 195 aaKnown RBP18.11■□□□□ 0.49
PHF20-201ENST00000339089 TESK2Q96S53 571 aa18.11■□□□□ 0.49
PHF20-201ENST00000339089 PXDNQ92626 1479 aa18.11■□□□□ 0.49
PHF20-201ENST00000339089 PHF8Q9UPP1 1060 aa18.11■□□□□ 0.49
PHF20-201ENST00000339089 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
PHF20-201ENST00000339089 CABP2Q9NPB3 220 aa18.1■□□□□ 0.49
PHF20-201ENST00000339089 KIF1AQ12756 1690 aa18.09■□□□□ 0.49
PHF20-201ENST00000339089 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
PHF20-201ENST00000339089 USP47Q96K76 1375 aa18.09■□□□□ 0.49
PHF20-201ENST00000339089 PMFBP1Q8TBY8 1022 aa18.08■□□□□ 0.49
PHF20-201ENST00000339089 XPCQ01831 940 aaPredicted RBP18.08■□□□□ 0.48
PHF20-201ENST00000339089 NPHP3Q7Z494 1330 aa18.07■□□□□ 0.48
PHF20-201ENST00000339089 JCADQ9P266 1359 aa18.06■□□□□ 0.48
PHF20-201ENST00000339089 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
PHF20-201ENST00000339089 CCDC61Q9Y6R9 512 aa18.06■□□□□ 0.48
PHF20-201ENST00000339089 PLEKHG3A1L390 1219 aa18.05■□□□□ 0.48
PHF20-201ENST00000339089 SRPK2P78362 688 aaKnown RBP18.05■□□□□ 0.48
PHF20-201ENST00000339089 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
PHF20-201ENST00000339089 SHPRHQ149N8 1683 aa18.04■□□□□ 0.48
PHF20-201ENST00000339089 KRT28Q7Z3Y7 464 aa18.04■□□□□ 0.48
PHF20-201ENST00000339089 ITSN1Q15811 1721 aa18.04■□□□□ 0.48
PHF20-201ENST00000339089 PNPLA6Q8IY17 1366 aa18.04■□□□□ 0.48
PHF20-201ENST00000339089 POLR3AO14802 1390 aaPredicted RBP18.03■□□□□ 0.48
PHF20-201ENST00000339089 PPIP5K1Q6PFW1 1433 aa18.02■□□□□ 0.47
PHF20-201ENST00000339089 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
PHF20-201ENST00000339089 ACEP12821 1306 aa18.01■□□□□ 0.47
PHF20-201ENST00000339089 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
PHF20-201ENST00000339089 CABP1Q9NZU7 370 aa18■□□□□ 0.47
PHF20-201ENST00000339089 SPATA31A3Q5VYP0 1347 aa18■□□□□ 0.47
PHF20-201ENST00000339089 LRP6O75581 1613 aa18■□□□□ 0.47
PHF20-201ENST00000339089 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
PHF20-201ENST00000339089 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
PHF20-201ENST00000339089 PSME1Q06323 249 aa17.99■□□□□ 0.47
PHF20-201ENST00000339089 NGDNQ8NEJ9 315 aaKnown RBP17.99■□□□□ 0.47
PHF20-201ENST00000339089 COL22A1Q8NFW1 1626 aaPredicted RBP17.98■□□□□ 0.47
PHF20-201ENST00000339089 PUS7Q96PZ0 661 aaKnown RBP17.98■□□□□ 0.47
PHF20-201ENST00000339089 HSPA5P11021 654 aaKnown RBP17.97■□□□□ 0.47
PHF20-201ENST00000339089 SPATA31A6Q5VVP1 1343 aa17.97■□□□□ 0.47
PHF20-201ENST00000339089 ATAD2Q6PL18 1390 aa17.96■□□□□ 0.47
PHF20-201ENST00000339089 TNS3Q68CZ2 1445 aa17.96■□□□□ 0.47
PHF20-201ENST00000339089 CD163L1Q9NR16 1453 aa17.96■□□□□ 0.47
PHF20-201ENST00000339089 ALS2Q96Q42 1657 aa17.96■□□□□ 0.46
PHF20-201ENST00000339089 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.46
PHF20-201ENST00000339089 CPSF1Q10570 1443 aaKnown RBP17.95■□□□□ 0.46
PHF20-201ENST00000339089 SSH2Q76I76 1423 aa17.95■□□□□ 0.46
PHF20-201ENST00000339089 SLC12A5Q9H2X9 1139 aa17.93■□□□□ 0.46
PHF20-201ENST00000339089 USP6P35125 1406 aa17.92■□□□□ 0.46
PHF20-201ENST00000339089 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
PHF20-201ENST00000339089 TMF1P82094 1093 aa17.92■□□□□ 0.46
PHF20-201ENST00000339089 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
PHF20-201ENST00000339089 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
PHF20-201ENST00000339089 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
PHF20-201ENST00000339089 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
PHF20-201ENST00000339089 RGS17Q9UGC6 210 aaPredicted RBP17.91■□□□□ 0.46
PHF20-201ENST00000339089 C11orf95C9JLR9 678 aaPredicted RBP17.9■□□□□ 0.46
PHF20-201ENST00000339089 CABLES1Q8TDN4 633 aa17.9■□□□□ 0.46
PHF20-201ENST00000339089 ARHGEF10O15013 1369 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms