RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 BICD2Q8TD16 824 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 TRIM5Q9C035 493 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 HOOK1Q9UJC3 728 aaKnown RBP6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 SLC4A10Q6U841 1118 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 ANKRD30AQ9BXX3 1397 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 NINLQ9Y2I6 1382 aa6.46□□□□□ -1.37
SDR42E1-201ENST00000328945 RNF214Q8ND24 703 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 MCM5P33992 734 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 CREBRFQ8IUR6 639 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC18Q5T9S5 1454 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 NUP155O75694 1391 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 FAM69CQ0P6D2 419 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 OSCARQ8IYS5 282 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 SMG6Q86US8 1419 aaKnown RBP6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 AXDND1Q5T1B0 1012 aaPredicted RBP6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 FAM184AQ8NB25 1140 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 TERF2IPQ9NYB0 399 aa6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 CIZ1Q9ULV3 898 aaPredicted RBP6.46□□□□□ -1.38
SDR42E1-201ENST00000328945 ATF3P18847 181 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC73Q6ZRK6 1079 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 NOL10Q9BSC4 688 aaKnown RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 USP47Q96K76 1375 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 FOXD4L6Q3SYB3 417 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 FOXD4L3Q6VB84 417 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 STK11IPQ8N1F8 1099 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 TIGD1Q96MW7 591 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 HNRNPMP52272 730 aaKnown RBP eCLIP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 SAMD1Q6SPF0 538 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 FAM107BQ9H098 131 aa6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 KIF2AO00139 706 aaPredicted RBP6.45□□□□□ -1.38
SDR42E1-201ENST00000328945 PES1O00541 588 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 ROCK1Q13464 1354 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 C11orf95C9JLR9 678 aaPredicted RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 RABEP1Q15276 862 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CAGE1Q8TC20 777 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 ZRSR2Q15696 482 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 DDX11Q96FC9 970 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CDC45O75419 566 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 ANKRD45Q5TZF3 282 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 INTS3Q68E01 1043 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 WWC1Q8IX03 1113 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 COG6Q9Y2V7 657 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 AKNAQ7Z591 1439 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC146Q8IYE0 955 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 GTPBP4Q9BZE4 634 aaKnown RBP6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 FBXO3Q9UK99 471 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 LMOD3Q0VAK6 560 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 VPS37DQ86XT2 251 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 DYDC1Q8WWB3 177 aa6.44□□□□□ -1.38
SDR42E1-201ENST00000328945 CBX1P83916 185 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 BRD4O60885 1362 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 CLCN1P35523 988 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 PIP4K2BP78356 416 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 TRAK1Q9UPV9 953 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 MCM4P33991 863 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 KANK4Q5T7N3 995 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC192P0DO97 292 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 ZKSCAN1P17029 563 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 SF3B2Q13435 895 aaKnown RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 WASHC2AQ641Q2 1341 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 PDIA4P13667 645 aaKnown RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 L3MBTL2Q969R5 705 aa6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
SDR42E1-201ENST00000328945 NEFHP12036 1026 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 CT47B1P0C2W7 299 aaPredicted RBP6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 DZIP1LQ8IYY4 767 aaKnown RBP6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 MYO6Q9UM54 1294 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 SMC3Q9UQE7 1217 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 GOLGA6L10A6NI86 522 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 RUFY2Q8WXA3 655 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 MPHOSPH9Q99550 1183 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 NBPF1Q3BBV0 1214 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 PPP4R3BQ5MIZ7 849 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC94Q9BW85 323 aaPredicted RBP6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 CCDC7Q96M83 1385 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 PLCD4Q9BRC7 762 aa6.42□□□□□ -1.38
SDR42E1-201ENST00000328945 IQCEQ6IPM2 695 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 PRIMPOLQ96LW4 560 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 PRPF40AO75400 957 aaKnown RBP6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 MINK1Q8N4C8 1332 aaPredicted RBP6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 TTC5Q8N0Z6 440 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 AMOTL1Q8IY63 956 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 MCM2P49736 904 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 SMAP1Q8IYB5 467 aaPredicted RBP6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 ANO2Q9NQ90 1003 aa6.41□□□□□ -1.38
SDR42E1-201ENST00000328945 GPATCH11Q8N954 259 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 SMC2O95347 1197 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 GTF2A1P52655 376 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 TXLNBQ8N3L3 684 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 NUTM2BA6NNL0 878 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 NUTM2EB1AL46 878 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 NUTM2AQ8IVF1 878 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 RBM33Q96EV2 1170 aaKnown RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 TMCO3Q6UWJ1 677 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 SPC24Q8NBT2 197 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 KINO60870 393 aaKnown RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 OLFM4Q6UX06 510 aa6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 BCL11BQ9C0K0 894 aaPredicted RBP6.4□□□□□ -1.38
SDR42E1-201ENST00000328945 SHTN1A0MZ66 631 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 247.7 ms