RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 NOL8Q76FK4 1167 aaKnown RBP16.1■□□□□ 0.17
TRAK1-201ENST00000327628 SLC3A2P08195 630 aaKnown RBP16.1■□□□□ 0.17
TRAK1-201ENST00000327628 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
TRAK1-201ENST00000327628 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
TRAK1-201ENST00000327628 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
TRAK1-201ENST00000327628 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
TRAK1-201ENST00000327628 EHBP1L1Q8N3D4 1523 aa16.09■□□□□ 0.17
TRAK1-201ENST00000327628 GSE1Q14687 1217 aa16.09■□□□□ 0.17
TRAK1-201ENST00000327628 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
TRAK1-201ENST00000327628 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
TRAK1-201ENST00000327628 CNTROBQ8N137 903 aa16.09■□□□□ 0.17
TRAK1-201ENST00000327628 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
TRAK1-201ENST00000327628 MEX3CQ5U5Q3 659 aaKnown RBP16.08■□□□□ 0.17
TRAK1-201ENST00000327628 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.17
TRAK1-201ENST00000327628 AK7Q96M32 723 aa16.08■□□□□ 0.17
TRAK1-201ENST00000327628 RRP7AQ9Y3A4 280 aaKnown RBP16.08■□□□□ 0.17
TRAK1-201ENST00000327628 APAF1O14727 1248 aa16.08■□□□□ 0.16
TRAK1-201ENST00000327628 PCMTD1Q96MG8 357 aaPredicted RBP16.08■□□□□ 0.16
TRAK1-201ENST00000327628 APPP05067 770 aa16.08■□□□□ 0.16
TRAK1-201ENST00000327628 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
TRAK1-201ENST00000327628 PDCP20941 246 aa16.08■□□□□ 0.16
TRAK1-201ENST00000327628 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
TRAK1-201ENST00000327628 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
TRAK1-201ENST00000327628 DHX16O60231 1041 aaKnown RBP16.07■□□□□ 0.16
TRAK1-201ENST00000327628 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
TRAK1-201ENST00000327628 PLEKHO1Q53GL0 409 aaPredicted RBP16.07■□□□□ 0.16
TRAK1-201ENST00000327628 ARHGAP5Q13017 1502 aa16.07■□□□□ 0.16
TRAK1-201ENST00000327628 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
TRAK1-201ENST00000327628 OLFM4Q6UX06 510 aa16.06■□□□□ 0.16
TRAK1-201ENST00000327628 MTERF4Q7Z6M4 381 aaKnown RBP16.06■□□□□ 0.16
TRAK1-201ENST00000327628 TXLNBQ8N3L3 684 aa16.06■□□□□ 0.16
TRAK1-201ENST00000327628 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
TRAK1-201ENST00000327628 ERCC4Q92889 916 aaPredicted RBP16.06■□□□□ 0.16
TRAK1-201ENST00000327628 COG6Q9Y2V7 657 aa16.06■□□□□ 0.16
TRAK1-201ENST00000327628 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
TRAK1-201ENST00000327628 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
TRAK1-201ENST00000327628 DAPK1P53355 1430 aa16.05■□□□□ 0.16
TRAK1-201ENST00000327628 MBD3O95983 291 aa16.05■□□□□ 0.16
TRAK1-201ENST00000327628 RIC3Q7Z5B4 369 aa16.05■□□□□ 0.16
TRAK1-201ENST00000327628 NCOA2Q15596 1464 aa16.04■□□□□ 0.16
TRAK1-201ENST00000327628 IFT140Q96RY7 1462 aa16.04■□□□□ 0.16
TRAK1-201ENST00000327628 GCC1Q96CN9 775 aa16.04■□□□□ 0.16
TRAK1-201ENST00000327628 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
TRAK1-201ENST00000327628 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
TRAK1-201ENST00000327628 ZNF428Q96B54 188 aa16.03■□□□□ 0.16
TRAK1-201ENST00000327628 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
TRAK1-201ENST00000327628 POGZQ7Z3K3 1410 aa16.03■□□□□ 0.16
TRAK1-201ENST00000327628 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
TRAK1-201ENST00000327628 RUFY1Q96T51 708 aa16.02■□□□□ 0.16
TRAK1-201ENST00000327628 GNL3LQ9NVN8 582 aaKnown RBP16.02■□□□□ 0.16
TRAK1-201ENST00000327628 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
TRAK1-201ENST00000327628 CLASRPQ8N2M8 674 aaKnown RBP16.02■□□□□ 0.15
TRAK1-201ENST00000327628 MSH5O43196 834 aa16.02■□□□□ 0.15
TRAK1-201ENST00000327628 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
TRAK1-201ENST00000327628 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
TRAK1-201ENST00000327628 TXLNAP40222 546 aa16.01■□□□□ 0.15
TRAK1-201ENST00000327628 ZNF396Q96N95 335 aaPredicted RBP16.01■□□□□ 0.15
TRAK1-201ENST00000327628 ANKRD1Q15327 319 aa16■□□□□ 0.15
TRAK1-201ENST00000327628 PRDM2Q13029 1718 aa16■□□□□ 0.15
TRAK1-201ENST00000327628 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
TRAK1-201ENST00000327628 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
TRAK1-201ENST00000327628 SLC52A1Q9NWF4 448 aa16■□□□□ 0.15
TRAK1-201ENST00000327628 FAM69CQ0P6D2 419 aa16■□□□□ 0.15
TRAK1-201ENST00000327628 PDE3AQ14432 1141 aa16■□□□□ 0.15
TRAK1-201ENST00000327628 JMYQ8N9B5 988 aa16■□□□□ 0.15
TRAK1-201ENST00000327628 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
TRAK1-201ENST00000327628 HSP90AA2PQ14568 343 aaPredicted RBP15.99■□□□□ 0.15
TRAK1-201ENST00000327628 ZSCAN25Q6NSZ9 544 aa15.99■□□□□ 0.15
TRAK1-201ENST00000327628 HOMER1Q86YM7 354 aa15.99■□□□□ 0.15
TRAK1-201ENST00000327628 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.99■□□□□ 0.158e-7■■■■■ 31.6
TRAK1-201ENST00000327628 DCTN1Q14203 1278 aa15.99■□□□□ 0.15
TRAK1-201ENST00000327628 SMARCE1Q969G3 411 aa15.99■□□□□ 0.15
TRAK1-201ENST00000327628 MAP7D2Q96T17 732 aa15.99■□□□□ 0.15
TRAK1-201ENST00000327628 NOM1Q5C9Z4 860 aaKnown RBP15.99■□□□□ 0.15
TRAK1-201ENST00000327628 C22orf23Q9BZE7 217 aa15.99■□□□□ 0.15
TRAK1-201ENST00000327628 RABEP1Q15276 862 aa15.98■□□□□ 0.15
TRAK1-201ENST00000327628 CCT4P50991 539 aaKnown RBP15.98■□□□□ 0.15
TRAK1-201ENST00000327628 ODF2Q5BJF6 829 aa15.98■□□□□ 0.15
TRAK1-201ENST00000327628 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
TRAK1-201ENST00000327628 WWC2Q6AWC2 1192 aa15.98■□□□□ 0.15
TRAK1-201ENST00000327628 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
TRAK1-201ENST00000327628 CT47A1Q5JQC4 288 aaPredicted RBP15.98■□□□□ 0.15
TRAK1-201ENST00000327628 DACH1Q9UI36 760 aa15.98■□□□□ 0.15
TRAK1-201ENST00000327628 CCAR2Q8N163 923 aaKnown RBP15.97■□□□□ 0.15
TRAK1-201ENST00000327628 SRCIN1Q9C0H9 1055 aa15.97■□□□□ 0.15
TRAK1-201ENST00000327628 EPS15P42566 896 aa15.97■□□□□ 0.15
TRAK1-201ENST00000327628 FILIP1LQ4L180 1135 aa15.97■□□□□ 0.15
TRAK1-201ENST00000327628 LUC7LQ9NQ29 371 aaKnown RBP15.97■□□□□ 0.15
TRAK1-201ENST00000327628 THEMISQ8N1K5 641 aaPredicted RBP15.97■□□□□ 0.15
TRAK1-201ENST00000327628 MNS1Q8NEH6 495 aa15.97■□□□□ 0.15
TRAK1-201ENST00000327628 ATAD2Q6PL18 1390 aa15.96■□□□□ 0.15
TRAK1-201ENST00000327628 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
TRAK1-201ENST00000327628 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
TRAK1-201ENST00000327628 VPS37CA5D8V6 355 aaPredicted RBP15.96■□□□□ 0.15
TRAK1-201ENST00000327628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRAK1-201ENST00000327628 HSP90B2PQ58FF3 399 aa15.96■□□□□ 0.15
TRAK1-201ENST00000327628 MRE11P49959 708 aa15.96■□□□□ 0.14
TRAK1-201ENST00000327628 CYB5RLQ6IPT4 315 aa15.95■□□□□ 0.14
TRAK1-201ENST00000327628 KIAA1107Q9UPP5 1409 aa15.95■□□□□ 0.14
TRAK1-201ENST00000327628 TATP17735 454 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms