RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 PSMA5P28066 241 aa13.69□□□□□ -0.22
VCPIP1-201ENST00000310421 DDX49Q9Y6V7 483 aaKnown RBP13.69□□□□□ -0.22
VCPIP1-201ENST00000310421 HIP1O00291 1037 aa13.69□□□□□ -0.22
VCPIP1-201ENST00000310421 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
VCPIP1-201ENST00000310421 ODF2Q5BJF6 829 aa13.69□□□□□ -0.22
VCPIP1-201ENST00000310421 CT47A1Q5JQC4 288 aaPredicted RBP13.69□□□□□ -0.22
VCPIP1-201ENST00000310421 NCOA2Q15596 1464 aa13.69□□□□□ -0.22
VCPIP1-201ENST00000310421 EIF2S2P20042 333 aaKnown RBP13.68□□□□□ -0.22
VCPIP1-201ENST00000310421 RIPK4P57078 832 aa13.68□□□□□ -0.22
VCPIP1-201ENST00000310421 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
VCPIP1-201ENST00000310421 TEX35Q5T0J7 233 aa13.68□□□□□ -0.22
VCPIP1-201ENST00000310421 KIF6Q6ZMV9 814 aa13.68□□□□□ -0.22
VCPIP1-201ENST00000310421 ACBD3Q9H3P7 528 aa13.68□□□□□ -0.22
VCPIP1-201ENST00000310421 CCDC73Q6ZRK6 1079 aa13.67□□□□□ -0.22
VCPIP1-201ENST00000310421 AK7Q96M32 723 aa13.67□□□□□ -0.22
VCPIP1-201ENST00000310421 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
VCPIP1-201ENST00000310421 CCAR2Q8N163 923 aaKnown RBP13.67□□□□□ -0.22
VCPIP1-201ENST00000310421 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
VCPIP1-201ENST00000310421 DNMBPQ6XZF7 1577 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 NUCB2P80303 420 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 HFM1A2PYH4 1435 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 CCDC173Q0VFZ6 552 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 GNL3LQ9NVN8 582 aaKnown RBP13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 DAPK1P53355 1430 aa13.66□□□□□ -0.22
VCPIP1-201ENST00000310421 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 CC2D2AQ9P2K1 1620 aa13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 RUFY1Q96T51 708 aa13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 FAM69CQ0P6D2 419 aa13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 ERC1Q8IUD2 1116 aa13.65□□□□□ -0.22
VCPIP1-201ENST00000310421 DHX8Q14562 1220 aaKnown RBP13.65□□□□□ -0.23
VCPIP1-201ENST00000310421 WWC2Q6AWC2 1192 aa13.65□□□□□ -0.23
VCPIP1-201ENST00000310421 PRKRIP1Q9H875 184 aaPredicted RBP13.65□□□□□ -0.23
VCPIP1-201ENST00000310421 PDCP20941 246 aa13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 CYB5RLQ6IPT4 315 aa13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 UBTFL1P0CB47 393 aaPredicted RBP13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
VCPIP1-201ENST00000310421 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 SASS6Q6UVJ0 657 aa13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 C9orf84Q5VXU9 1444 aa13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 FOXD4L5Q5VV16 416 aaPredicted RBP13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 FOXD4L4Q8WXT5 416 aaPredicted RBP13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 ARGLU1Q9NWB6 273 aaPredicted RBP13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 TXLNAP40222 546 aa13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 IQGAP2Q13576 1575 aa13.63□□□□□ -0.23
VCPIP1-201ENST00000310421 CCP110O43303 1012 aa13.62□□□□□ -0.23
VCPIP1-201ENST00000310421 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.61□□□□□ -0.231e-6■■■■■ 70.5
VCPIP1-201ENST00000310421 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 HOMER1Q86YM7 354 aa13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 LETM1O95202 739 aaPredicted RBP13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 TXLNBQ8N3L3 684 aa13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 GNAI3P08754 354 aa13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.61□□□□□ -0.23
VCPIP1-201ENST00000310421 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
VCPIP1-201ENST00000310421 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
VCPIP1-201ENST00000310421 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
VCPIP1-201ENST00000310421 MCM2P49736 904 aa13.59□□□□□ -0.23
VCPIP1-201ENST00000310421 CDC45O75419 566 aa13.59□□□□□ -0.23
VCPIP1-201ENST00000310421 PDE4AP27815 886 aa13.59□□□□□ -0.23
VCPIP1-201ENST00000310421 DCTN1Q14203 1278 aa13.59□□□□□ -0.23
VCPIP1-201ENST00000310421 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.59□□□□□ -0.23
VCPIP1-201ENST00000310421 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
VCPIP1-201ENST00000310421 ELL2O00472 640 aaPredicted RBP13.59□□□□□ -0.23
VCPIP1-201ENST00000310421 VPS37CA5D8V6 355 aaPredicted RBP13.58□□□□□ -0.23
VCPIP1-201ENST00000310421 NAP1L1P55209 391 aaKnown RBP13.58□□□□□ -0.23
VCPIP1-201ENST00000310421 OFD1O75665 1012 aa13.58□□□□□ -0.24
VCPIP1-201ENST00000310421 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
VCPIP1-201ENST00000310421 COG6Q9Y2V7 657 aa13.58□□□□□ -0.24
VCPIP1-201ENST00000310421 CDK5RAP3Q96JB5 506 aa13.58□□□□□ -0.24
VCPIP1-201ENST00000310421 ARID3AQ99856 593 aa13.58□□□□□ -0.24
VCPIP1-201ENST00000310421 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
VCPIP1-201ENST00000310421 CT47B1P0C2W7 299 aaPredicted RBP13.57□□□□□ -0.24
VCPIP1-201ENST00000310421 JMYQ8N9B5 988 aa13.57□□□□□ -0.24
VCPIP1-201ENST00000310421 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
VCPIP1-201ENST00000310421 HSP90B2PQ58FF3 399 aa13.57□□□□□ -0.24
VCPIP1-201ENST00000310421 NOM1Q5C9Z4 860 aaKnown RBP13.57□□□□□ -0.24
VCPIP1-201ENST00000310421 LUC7LQ9NQ29 371 aaKnown RBP13.57□□□□□ -0.24
VCPIP1-201ENST00000310421 CTTNBP2Q8WZ74 1663 aa13.56□□□□□ -0.24
VCPIP1-201ENST00000310421 APAF1O14727 1248 aa13.56□□□□□ -0.24
VCPIP1-201ENST00000310421 WASHC4Q2M389 1173 aa13.56□□□□□ -0.24
VCPIP1-201ENST00000310421 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
VCPIP1-201ENST00000310421 HSP90AA2PQ14568 343 aaPredicted RBP13.56□□□□□ -0.24
VCPIP1-201ENST00000310421 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
VCPIP1-201ENST00000310421 CHMP5Q9NZZ3 219 aa13.56□□□□□ -0.24
VCPIP1-201ENST00000310421 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms