RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 WAPLQ7Z5K2 1190 aa25.62■■□□□ 1.69
CCS-201ENST00000310190 ADGRB2O60241 1585 aa25.61■■□□□ 1.69
CCS-201ENST00000310190 GPRASP1Q5JY77 1395 aa25.61■■□□□ 1.69
CCS-201ENST00000310190 ARHGEF28Q8N1W1 1705 aaKnown RBP25.61■■□□□ 1.69
CCS-201ENST00000310190 NBPF1Q3BBV0 1214 aa25.58■■□□□ 1.69
CCS-201ENST00000310190 PRAM1Q96QH2 718 aa25.57■■□□□ 1.68
CCS-201ENST00000310190 C1orf167Q5SNV9 1468 aa25.57■■□□□ 1.68
CCS-201ENST00000310190 AHDC1Q5TGY3 1603 aaPredicted RBP25.56■■□□□ 1.68
CCS-201ENST00000310190 HSPA1LP34931 641 aa25.56■■□□□ 1.68
CCS-201ENST00000310190 FMN2Q9NZ56 1722 aa25.55■■□□□ 1.68
CCS-201ENST00000310190 NBPF8Q3BBV2 869 aa25.55■■□□□ 1.68
CCS-201ENST00000310190 TRAK1Q9UPV9 953 aa25.55■■□□□ 1.68
CCS-201ENST00000310190 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
CCS-201ENST00000310190 BRINP3Q76B58 766 aa25.53■■□□□ 1.68
CCS-201ENST00000310190 RALGAPBQ86X10 1494 aa25.53■■□□□ 1.68
CCS-201ENST00000310190 POGKQ9P215 609 aa25.52■■□□□ 1.68
CCS-201ENST00000310190 NHSL1Q5SYE7 1610 aa25.52■■□□□ 1.68
CCS-201ENST00000310190 ANKARQ7Z5J8 1434 aa25.48■■□□□ 1.67
CCS-201ENST00000310190 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
CCS-201ENST00000310190 ROCK2O75116 1388 aaKnown RBP25.47■■□□□ 1.67
CCS-201ENST00000310190 PHLPP1O60346 1717 aa25.46■■□□□ 1.67
CCS-201ENST00000310190 EIF3AQ14152 1382 aaKnown RBP25.46■■□□□ 1.67
CCS-201ENST00000310190 CCER1Q8TC90 406 aaPredicted RBP25.44■■□□□ 1.66
CCS-201ENST00000310190 CENPJQ9HC77 1338 aaPredicted RBP25.42■■□□□ 1.66
CCS-201ENST00000310190 WASLO00401 505 aaPredicted RBP25.42■■□□□ 1.66
CCS-201ENST00000310190 SBNO2Q9Y2G9 1366 aa25.42■■□□□ 1.66
CCS-201ENST00000310190 TULP4Q9NRJ4 1543 aa25.42■■□□□ 1.66
CCS-201ENST00000310190 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
CCS-201ENST00000310190 USP32Q8NFA0 1604 aa25.41■■□□□ 1.66
CCS-201ENST00000310190 ORAI2Q96SN7 254 aa25.4■■□□□ 1.66
CCS-201ENST00000310190 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
CCS-201ENST00000310190 SAFB2Q14151 953 aaKnown RBP eCLIP25.39■■□□□ 1.66
CCS-201ENST00000310190 ILDR2Q71H61 639 aa25.38■■□□□ 1.65
CCS-201ENST00000310190 DISP3Q9P2K9 1392 aa25.38■■□□□ 1.65
CCS-201ENST00000310190 QRICH2Q9H0J4 1663 aa25.38■■□□□ 1.65
CCS-201ENST00000310190 RGPD8O14715 1765 aaPredicted RBP25.38■■□□□ 1.65
CCS-201ENST00000310190 MINK1Q8N4C8 1332 aaPredicted RBP25.37■■□□□ 1.65
CCS-201ENST00000310190 JCADQ9P266 1359 aa25.36■■□□□ 1.65
CCS-201ENST00000310190 NPHP3Q7Z494 1330 aa25.36■■□□□ 1.65
CCS-201ENST00000310190 SHPRHQ149N8 1683 aa25.36■■□□□ 1.65
CCS-201ENST00000310190 ESCO1Q5FWF5 840 aa25.35■■□□□ 1.65
CCS-201ENST00000310190 CARD11Q9BXL7 1154 aa25.35■■□□□ 1.65
CCS-201ENST00000310190 ATP7BP35670 1465 aa25.34■■□□□ 1.65
CCS-201ENST00000310190 PXDNQ92626 1479 aa25.34■■□□□ 1.65
CCS-201ENST00000310190 ITSN1Q15811 1721 aa25.33■■□□□ 1.65
CCS-201ENST00000310190 LRRC59Q96AG4 307 aaKnown RBP25.33■■□□□ 1.65
CCS-201ENST00000310190 HIRIP3Q9BW71 556 aaPredicted RBP25.32■■□□□ 1.64
CCS-201ENST00000310190 PRR36Q9H6K5 1346 aa25.32■■□□□ 1.64
CCS-201ENST00000310190 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
CCS-201ENST00000310190 TOPAZ1Q8N9V7 1692 aa25.3■■□□□ 1.64
CCS-201ENST00000310190 CDK19Q9BWU1 502 aa25.3■■□□□ 1.64
CCS-201ENST00000310190 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
CCS-201ENST00000310190 SPATA31A6Q5VVP1 1343 aa25.28■■□□□ 1.64
CCS-201ENST00000310190 NUTM2FA1L443 756 aa25.27■■□□□ 1.64
CCS-201ENST00000310190 NUDT16Q96DE0 195 aaKnown RBP25.27■■□□□ 1.64
CCS-201ENST00000310190 PUS7Q96PZ0 661 aaKnown RBP25.26■■□□□ 1.63
CCS-201ENST00000310190 CCDC61Q9Y6R9 512 aa25.26■■□□□ 1.63
CCS-201ENST00000310190 MED1Q15648 1581 aaPredicted RBP25.26■■□□□ 1.63
CCS-201ENST00000310190 PLEKHG3A1L390 1219 aa25.25■■□□□ 1.63
CCS-201ENST00000310190 FOXO3O43524 673 aa25.25■■□□□ 1.63
CCS-201ENST00000310190 EVC2Q86UK5 1308 aa25.25■■□□□ 1.63
CCS-201ENST00000310190 COL22A1Q8NFW1 1626 aaPredicted RBP25.25■■□□□ 1.63
CCS-201ENST00000310190 POLR3AO14802 1390 aaPredicted RBP25.24■■□□□ 1.63
CCS-201ENST00000310190 PNPLA6Q8IY17 1366 aa25.24■■□□□ 1.63
CCS-201ENST00000310190 SOCS7O14512 581 aa25.24■■□□□ 1.63
CCS-201ENST00000310190 DDX17Q92841 729 aaKnown RBP25.24■■□□□ 1.63
CCS-201ENST00000310190 SBNO1A3KN83 1393 aa25.23■■□□□ 1.63
CCS-201ENST00000310190 PSME1Q06323 249 aa25.2■■□□□ 1.62
CCS-201ENST00000310190 TESK2Q96S53 571 aa25.2■■□□□ 1.62
CCS-201ENST00000310190 TRPM3Q9HCF6 1732 aaPredicted RBP25.2■■□□□ 1.62
CCS-201ENST00000310190 SPATA31A3Q5VYP0 1347 aa25.19■■□□□ 1.62
CCS-201ENST00000310190 KRT28Q7Z3Y7 464 aa25.19■■□□□ 1.62
CCS-201ENST00000310190 BRD4O60885 1362 aaPredicted RBP25.18■■□□□ 1.62
CCS-201ENST00000310190 USP47Q96K76 1375 aa25.18■■□□□ 1.62
CCS-201ENST00000310190 ATAD2Q6PL18 1390 aa25.17■■□□□ 1.62
CCS-201ENST00000310190 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
CCS-201ENST00000310190 SRPK2P78362 688 aaKnown RBP25.16■■□□□ 1.62
CCS-201ENST00000310190 TNS3Q68CZ2 1445 aa25.15■■□□□ 1.62
CCS-201ENST00000310190 PMFBP1Q8TBY8 1022 aa25.15■■□□□ 1.62
CCS-201ENST00000310190 ALS2Q96Q42 1657 aa25.14■■□□□ 1.62
CCS-201ENST00000310190 CABP2Q9NPB3 220 aa25.14■■□□□ 1.62
CCS-201ENST00000310190 PPIP5K1Q6PFW1 1433 aa25.13■■□□□ 1.61
CCS-201ENST00000310190 LRP6O75581 1613 aa25.13■■□□□ 1.61
CCS-201ENST00000310190 ARHGEF10O15013 1369 aa25.12■■□□□ 1.61
CCS-201ENST00000310190 ACEP12821 1306 aa25.12■■□□□ 1.61
CCS-201ENST00000310190 NGDNQ8NEJ9 315 aaKnown RBP25.11■■□□□ 1.61
CCS-201ENST00000310190 XPCQ01831 940 aaPredicted RBP25.08■■□□□ 1.61
CCS-201ENST00000310190 NINLQ9Y2I6 1382 aa25.07■■□□□ 1.6
CCS-201ENST00000310190 CPSF1Q10570 1443 aaKnown RBP25.07■■□□□ 1.6
CCS-201ENST00000310190 SSH2Q76I76 1423 aa25.07■■□□□ 1.6
CCS-201ENST00000310190 CABP1Q9NZU7 370 aa25.07■■□□□ 1.6
CCS-201ENST00000310190 AKAP12Q02952 1782 aa25.06■■□□□ 1.6
CCS-201ENST00000310190 ZNF692Q9BU19 519 aaPredicted RBP25.06■■□□□ 1.6
CCS-201ENST00000310190 USP6P35125 1406 aa25.04■■□□□ 1.6
CCS-201ENST00000310190 MARF1Q9Y4F3 1742 aaKnown RBP25.03■■□□□ 1.6
CCS-201ENST00000310190 TMF1P82094 1093 aa25.03■■□□□ 1.6
CCS-201ENST00000310190 CRYBG1Q9Y4K1 1723 aa25.03■■□□□ 1.6
CCS-201ENST00000310190 ABCA3Q99758 1704 aa25.01■■□□□ 1.59
CCS-201ENST00000310190 EIF4G2P78344 907 aaKnown RBP eCLIP25.01■■□□□ 1.592e-6■■■■■ 26.9
CCS-201ENST00000310190 CDCA8Q53HL2 280 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms