RNA–Protein interactions for RNA: ENST00000309755.8

KLHL3-201, Transcript of kelch like family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL3, Length 6,806 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-201ENST00000309755 CCDC7Q96M83 1385 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 SDF4Q9BRK5 362 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 CCDC66A2RUB6 948 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 SPC24Q8NBT2 197 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 KDM4AO75164 1064 aa13.35□□□□□ -0.27
KLHL3-201ENST00000309755 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.34□□□□□ -0.27
KLHL3-201ENST00000309755 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
KLHL3-201ENST00000309755 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
KLHL3-201ENST00000309755 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
KLHL3-201ENST00000309755 SMC2O95347 1197 aa13.34□□□□□ -0.27
KLHL3-201ENST00000309755 SKIDA1Q1XH10 827 aa13.34□□□□□ -0.27
KLHL3-201ENST00000309755 ERICH2A1L162 156 aa13.33□□□□□ -0.27
KLHL3-201ENST00000309755 ERC2O15083 957 aa13.33□□□□□ -0.28
KLHL3-201ENST00000309755 AMOTL1Q8IY63 956 aa13.33□□□□□ -0.28
KLHL3-201ENST00000309755 MPNDQ8N594 471 aa13.33□□□□□ -0.28
KLHL3-201ENST00000309755 CNTLNQ9NXG0 1405 aa13.33□□□□□ -0.28
KLHL3-201ENST00000309755 HMOX1P09601 288 aa13.33□□□□□ -0.28
KLHL3-201ENST00000309755 SAFBQ15424 915 aaKnown RBP eCLIP13.33□□□□□ -0.28
KLHL3-201ENST00000309755 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
KLHL3-201ENST00000309755 LETM1O95202 739 aaPredicted RBP13.33□□□□□ -0.28
KLHL3-201ENST00000309755 UACAQ9BZF9 1416 aa13.32□□□□□ -0.28
KLHL3-201ENST00000309755 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
KLHL3-201ENST00000309755 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
KLHL3-201ENST00000309755 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
KLHL3-201ENST00000309755 PDZRN3Q9UPQ7 1066 aa13.32□□□□□ -0.28
KLHL3-201ENST00000309755 MBD3O95983 291 aa13.31□□□□□ -0.28
KLHL3-201ENST00000309755 NEK4P51957 841 aa13.31□□□□□ -0.28
KLHL3-201ENST00000309755 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
KLHL3-201ENST00000309755 RDXP35241 583 aaKnown RBP13.31□□□□□ -0.28
KLHL3-201ENST00000309755 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
KLHL3-201ENST00000309755 GNAI1P63096 354 aa13.3□□□□□ -0.28
KLHL3-201ENST00000309755 ERCC4Q92889 916 aaPredicted RBP13.3□□□□□ -0.28
KLHL3-201ENST00000309755 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
KLHL3-201ENST00000309755 FIBPO43427 364 aa13.3□□□□□ -0.28
KLHL3-201ENST00000309755 HMGN5P82970 282 aaKnown RBP13.3□□□□□ -0.28
KLHL3-201ENST00000309755 NEUROD6Q96NK8 337 aa13.3□□□□□ -0.28
KLHL3-201ENST00000309755 HSP90AB4PQ58FF6 505 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 CT47A1Q5JQC4 288 aaPredicted RBP13.29□□□□□ -0.28
KLHL3-201ENST00000309755 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 LEKR1Q6ZMV7 388 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 AAMPQ13685 434 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 WASHC4Q2M389 1173 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 GRPEL1Q9HAV7 217 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 UQCRHLA0A096LP55 91 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 UQCRHP07919 91 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 CCDC191Q8NCU4 936 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 TRIM34Q9BYJ4 488 aa13.29□□□□□ -0.28
KLHL3-201ENST00000309755 VGFO15240 615 aaPredicted RBP13.28□□□□□ -0.28
KLHL3-201ENST00000309755 NINLQ9Y2I6 1382 aa13.28□□□□□ -0.28
KLHL3-201ENST00000309755 CEBPZQ03701 1054 aaKnown RBP13.28□□□□□ -0.28
KLHL3-201ENST00000309755 CNTROBQ8N137 903 aa13.28□□□□□ -0.28
KLHL3-201ENST00000309755 PSMA5P28066 241 aa13.28□□□□□ -0.28
KLHL3-201ENST00000309755 KINO60870 393 aaKnown RBP13.28□□□□□ -0.28
KLHL3-201ENST00000309755 OFD1O75665 1012 aa13.27□□□□□ -0.28
KLHL3-201ENST00000309755 EPS15P42566 896 aa13.27□□□□□ -0.28
KLHL3-201ENST00000309755 DCTN1Q14203 1278 aa13.27□□□□□ -0.28
KLHL3-201ENST00000309755 TSPYL1Q9H0U9 437 aa13.27□□□□□ -0.28
KLHL3-201ENST00000309755 C1orf115Q9H7X2 142 aa13.27□□□□□ -0.28
KLHL3-201ENST00000309755 BRPF1P55201 1214 aaPredicted RBP13.27□□□□□ -0.28
KLHL3-201ENST00000309755 AXDND1Q5T1B0 1012 aaPredicted RBP13.27□□□□□ -0.28
KLHL3-201ENST00000309755 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
KLHL3-201ENST00000309755 AKNAQ7Z591 1439 aa13.27□□□□□ -0.29
KLHL3-201ENST00000309755 UBTFL1P0CB47 393 aaPredicted RBP13.27□□□□□ -0.29
KLHL3-201ENST00000309755 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
KLHL3-201ENST00000309755 AIMP1Q12904 312 aaKnown RBP13.27□□□□□ -0.29
KLHL3-201ENST00000309755 FYB1O15117 783 aa13.26□□□□□ -0.29
KLHL3-201ENST00000309755 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
KLHL3-201ENST00000309755 ODF2Q5BJF6 829 aa13.26□□□□□ -0.29
KLHL3-201ENST00000309755 FSD1Q9BTV5 496 aa13.26□□□□□ -0.29
KLHL3-201ENST00000309755 RUSC2Q8N2Y8 1516 aa13.26□□□□□ -0.29
KLHL3-201ENST00000309755 WIZO95785 1651 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 RABEP1Q15276 862 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 EVA1CP58658 441 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 PLCD4Q9BRC7 762 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 CTDP1Q9Y5B0 961 aaPredicted RBP13.25□□□□□ -0.29
KLHL3-201ENST00000309755 BRD4O60885 1362 aaPredicted RBP13.25□□□□□ -0.29
KLHL3-201ENST00000309755 ATP2B1P20020 1258 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 ZFYVE27Q5T4F4 411 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 RIC3Q7Z5B4 369 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 GGNBP2Q9H3C7 697 aa13.25□□□□□ -0.29
KLHL3-201ENST00000309755 CCP110O43303 1012 aa13.24□□□□□ -0.29
KLHL3-201ENST00000309755 CCDC43Q96MW1 224 aaKnown RBP13.24□□□□□ -0.29
KLHL3-201ENST00000309755 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
KLHL3-201ENST00000309755 BRMS1Q9HCU9 246 aa13.24□□□□□ -0.29
KLHL3-201ENST00000309755 HSP90AB3PQ58FF7 597 aa13.24□□□□□ -0.29
KLHL3-201ENST00000309755 SMARCE1Q969G3 411 aa13.23□□□□□ -0.29
KLHL3-201ENST00000309755 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
KLHL3-201ENST00000309755 MCM2P49736 904 aa13.23□□□□□ -0.29
KLHL3-201ENST00000309755 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
KLHL3-201ENST00000309755 BCAR3O75815 825 aa13.23□□□□□ -0.29
KLHL3-201ENST00000309755 FILIP1LQ4L180 1135 aa13.23□□□□□ -0.29
KLHL3-201ENST00000309755 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
KLHL3-201ENST00000309755 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
KLHL3-201ENST00000309755 FAM177A1Q8N128 213 aaPredicted RBP13.22□□□□□ -0.29
KLHL3-201ENST00000309755 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
KLHL3-201ENST00000309755 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
KLHL3-201ENST00000309755 K7ELQ4 463 aaPredicted RBP13.22□□□□□ -0.29
KLHL3-201ENST00000309755 SERPINC1P01008 464 aa13.22□□□□□ -0.29
KLHL3-201ENST00000309755 XBP1P17861 261 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms