RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 CENPJQ9HC77 1338 aaPredicted RBP6.64□□□□□ -1.35
CAST-201ENST00000309190 ATF3P18847 181 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 MORC1Q86VD1 984 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 ZC3H13Q5T200 1668 aaKnown RBP6.64□□□□□ -1.35
CAST-201ENST00000309190 LRPPRCP42704 1394 aaKnown RBP6.64□□□□□ -1.35
CAST-201ENST00000309190 DIP2BQ9P265 1576 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 UBAP1LF5GYI3 381 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 NLRP6P59044 892 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 PLEKHH1Q9ULM0 1364 aa6.64□□□□□ -1.35
CAST-201ENST00000309190 ELL2O00472 640 aaPredicted RBP6.64□□□□□ -1.35
CAST-201ENST00000309190 ATP10AO60312 1499 aa6.63□□□□□ -1.35
CAST-201ENST00000309190 CSB-PGBD3P0DP91 1061 aa6.63□□□□□ -1.35
CAST-201ENST00000309190 USHBP1Q8N6Y0 703 aa6.63□□□□□ -1.35
CAST-201ENST00000309190 NME9Q86XW9 330 aa6.63□□□□□ -1.35
CAST-201ENST00000309190 ABTB2Q8N961 1025 aa6.63□□□□□ -1.35
CAST-201ENST00000309190 RBM19Q9Y4C8 960 aaKnown RBP6.63□□□□□ -1.35
CAST-201ENST00000309190 CEP152O94986 1710 aa6.63□□□□□ -1.35
CAST-201ENST00000309190 SPHKAPQ2M3C7 1700 aa6.63□□□□□ -1.35
CAST-201ENST00000309190 FAM135AQ9P2D6 1515 aa6.62□□□□□ -1.35
CAST-201ENST00000309190 CCDC7Q96M83 1385 aa6.62□□□□□ -1.35
CAST-201ENST00000309190 FAM182BQ5T319 152 aa6.62□□□□□ -1.35
CAST-201ENST00000309190 ZNF330Q9Y3S2 320 aaPredicted RBP6.62□□□□□ -1.35
CAST-201ENST00000309190 KIAA1210Q9ULL0 1709 aa6.61□□□□□ -1.35
CAST-201ENST00000309190 SMG6Q86US8 1419 aaKnown RBP6.61□□□□□ -1.35
CAST-201ENST00000309190 MYO3AQ8NEV4 1616 aa6.61□□□□□ -1.35
CAST-201ENST00000309190 U2AF1L5P0DN76 240 aaPredicted RBP6.61□□□□□ -1.35
CAST-201ENST00000309190 U2AF1Q01081 240 aaKnown RBP eCLIP6.61□□□□□ -1.35
CAST-201ENST00000309190 METP08581 1390 aa6.61□□□□□ -1.35
CAST-201ENST00000309190 NECTIN2Q92692 538 aa6.61□□□□□ -1.35
CAST-201ENST00000309190 NUDT16Q96DE0 195 aaKnown RBP6.61□□□□□ -1.35
CAST-201ENST00000309190 INSRP06213 1382 aa6.6□□□□□ -1.35
CAST-201ENST00000309190 PLA2R1Q13018 1463 aa6.6□□□□□ -1.35
CAST-201ENST00000309190 NBR1Q14596 966 aa6.6□□□□□ -1.35
CAST-201ENST00000309190 ABCC1P33527 1531 aa6.6□□□□□ -1.35
CAST-201ENST00000309190 ERICH6BQ5W0A0 696 aa6.6□□□□□ -1.35
CAST-201ENST00000309190 SYTL4Q96C24 671 aaPredicted RBP6.6□□□□□ -1.35
CAST-201ENST00000309190 MADDQ8WXG6 1647 aa6.59□□□□□ -1.35
CAST-201ENST00000309190 ZFYVE16Q7Z3T8 1539 aa6.59□□□□□ -1.35
CAST-201ENST00000309190 AMPHP49418 695 aa6.59□□□□□ -1.35
CAST-201ENST00000309190 WDR43Q15061 677 aaKnown RBP eCLIP6.59□□□□□ -1.35
CAST-201ENST00000309190 VWDEQ8N2E2 1590 aa6.59□□□□□ -1.36
CAST-201ENST00000309190 SHPRHQ149N8 1683 aa6.59□□□□□ -1.36
CAST-201ENST00000309190 ARID3AQ99856 593 aa6.59□□□□□ -1.36
CAST-201ENST00000309190 BCL2L13Q9BXK5 485 aa6.59□□□□□ -1.36
CAST-201ENST00000309190 EMILIN1Q9Y6C2 1016 aa6.59□□□□□ -1.36
CAST-201ENST00000309190 MTHFSP49914 203 aa6.58□□□□□ -1.36
CAST-201ENST00000309190 HDGFL2Q7Z4V5 671 aaPredicted RBP6.58□□□□□ -1.36
CAST-201ENST00000309190 THUMPD2Q9BTF0 503 aaKnown RBP6.58□□□□□ -1.36
CAST-201ENST00000309190 C14orf93Q9H972 538 aaKnown RBP6.58□□□□□ -1.36
CAST-201ENST00000309190 PPRC1Q5VV67 1664 aaKnown RBP6.58□□□□□ -1.36
CAST-201ENST00000309190 RIMS2Q9UQ26 1411 aa6.58□□□□□ -1.36
CAST-201ENST00000309190 INO80Q9ULG1 1556 aaPredicted RBP6.57□□□□□ -1.36
CAST-201ENST00000309190 NEO1Q92859 1461 aa6.57□□□□□ -1.36
CAST-201ENST00000309190 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.57□□□□□ -1.36
CAST-201ENST00000309190 EVC2Q86UK5 1308 aa6.57□□□□□ -1.36
CAST-201ENST00000309190 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
CAST-201ENST00000309190 DUOX2Q9NRD8 1548 aa6.57□□□□□ -1.36
CAST-201ENST00000309190 NLRP2Q9NX02 1062 aa6.57□□□□□ -1.36
CAST-201ENST00000309190 NGEFQ8N5V2 710 aa6.56□□□□□ -1.36
CAST-201ENST00000309190 CARD14Q9BXL6 1004 aa6.56□□□□□ -1.36
CAST-201ENST00000309190 MIS18AQ9NYP9 233 aa6.56□□□□□ -1.36
CAST-201ENST00000309190 DCTN1Q14203 1278 aa6.56□□□□□ -1.36
CAST-201ENST00000309190 WWC3Q9ULE0 1092 aa6.56□□□□□ -1.36
CAST-201ENST00000309190 MROH1Q8NDA8 1641 aa6.56□□□□□ -1.36
CAST-201ENST00000309190 BLMP54132 1417 aaPredicted RBP6.56□□□□□ -1.36
CAST-201ENST00000309190 GPRASP1Q5JY77 1395 aa6.56□□□□□ -1.36
CAST-201ENST00000309190 ACEP12821 1306 aa6.55□□□□□ -1.36
CAST-201ENST00000309190 DDX54Q8TDD1 881 aaKnown RBP6.55□□□□□ -1.36
CAST-201ENST00000309190 TESK2Q96S53 571 aa6.55□□□□□ -1.36
CAST-201ENST00000309190 EVA1CP58658 441 aa6.55□□□□□ -1.36
CAST-201ENST00000309190 LRRC59Q96AG4 307 aaKnown RBP6.55□□□□□ -1.36
CAST-201ENST00000309190 PRKRIP1Q9H875 184 aaPredicted RBP6.55□□□□□ -1.36
CAST-201ENST00000309190 WASLO00401 505 aaPredicted RBP6.55□□□□□ -1.36
CAST-201ENST00000309190 TERF2IPQ9NYB0 399 aa6.55□□□□□ -1.36
CAST-201ENST00000309190 CCDC61Q9Y6R9 512 aa6.55□□□□□ -1.36
CAST-201ENST00000309190 ABCA6Q8N139 1617 aa6.55□□□□□ -1.36
CAST-201ENST00000309190 EIF5BO60841 1220 aaKnown RBP6.54□□□□□ -1.36
CAST-201ENST00000309190 HSP90AB2PQ58FF8 381 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 MEX3CQ5U5Q3 659 aaKnown RBP6.54□□□□□ -1.36
CAST-201ENST00000309190 C8orf37Q96NL8 207 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 RTEL1-TNFRSF6BF6WH68 1400 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 APAF1O14727 1248 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 SETD1BQ9UPS6 1966 aaKnown RBP6.54□□□□□ -1.36
CAST-201ENST00000309190 EIF2AK4Q9P2K8 1649 aaKnown RBP6.54□□□□□ -1.36
CAST-201ENST00000309190 MLH3Q9UHC1 1453 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 CDCA7LQ96GN5 454 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 COG3Q96JB2 828 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 PHF8Q9UPP1 1060 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 ABCA9Q8IUA7 1624 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 TMEM2Q9UHN6 1383 aa6.54□□□□□ -1.36
CAST-201ENST00000309190 USP32Q8NFA0 1604 aa6.53□□□□□ -1.36
CAST-201ENST00000309190 ROBO2Q9HCK4 1378 aa6.53□□□□□ -1.36
CAST-201ENST00000309190 CERKQ8TCT0 537 aa6.53□□□□□ -1.36
CAST-201ENST00000309190 FRAT1Q92837 279 aaPredicted RBP6.53□□□□□ -1.36
CAST-201ENST00000309190 ADAMTS8Q9UP79 889 aa6.53□□□□□ -1.36
CAST-201ENST00000309190 PLIN1O60240 522 aa6.53□□□□□ -1.36
CAST-201ENST00000309190 KRT28Q7Z3Y7 464 aa6.53□□□□□ -1.36
CAST-201ENST00000309190 PRDM11Q9NQV5 511 aa6.53□□□□□ -1.36
CAST-201ENST00000309190 TMEM94Q12767 1356 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms