RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 SLC6A16Q9GZN6 736 aa11.99□□□□□ -0.49
C11orf40-201ENST00000307616 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.99□□□□□ -0.49
C11orf40-201ENST00000307616 SPTLC1O15269 473 aa11.98□□□□□ -0.49
C11orf40-201ENST00000307616 FAM160A2Q8N612 972 aaPredicted RBP11.98□□□□□ -0.49
C11orf40-201ENST00000307616 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
C11orf40-201ENST00000307616 C6orf229H3BNL8 230 aa11.97□□□□□ -0.49
C11orf40-201ENST00000307616 GGCXP38435 758 aa11.97□□□□□ -0.49
C11orf40-201ENST00000307616 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
C11orf40-201ENST00000307616 POLR3EQ9NVU0 708 aa11.97□□□□□ -0.49
C11orf40-201ENST00000307616 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
C11orf40-201ENST00000307616 GJA5P36382 358 aa11.96□□□□□ -0.49
C11orf40-201ENST00000307616 CSPP1Q1MSJ5 1256 aa11.96□□□□□ -0.49
C11orf40-201ENST00000307616 USB1Q9BQ65 265 aaKnown RBP11.96□□□□□ -0.49
C11orf40-201ENST00000307616 PRDM9Q9NQV7 894 aa11.96□□□□□ -0.49
C11orf40-201ENST00000307616 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
C11orf40-201ENST00000307616 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
C11orf40-201ENST00000307616 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
C11orf40-201ENST00000307616 CLK2P49760 499 aaKnown RBP11.94□□□□□ -0.5
C11orf40-201ENST00000307616 MSS51Q4VC12 460 aa11.94□□□□□ -0.5
C11orf40-201ENST00000307616 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
C11orf40-201ENST00000307616 MTMR2Q13614 643 aa11.92□□□□□ -0.5
C11orf40-201ENST00000307616 RETREG3Q86VR2 466 aa11.92□□□□□ -0.5
C11orf40-201ENST00000307616 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
C11orf40-201ENST00000307616 CABLES1Q8TDN4 633 aa11.9□□□□□ -0.5
C11orf40-201ENST00000307616 HRCP23327 699 aa11.89□□□□□ -0.51
C11orf40-201ENST00000307616 QPCTQ16769 361 aa11.89□□□□□ -0.51
C11orf40-201ENST00000307616 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
C11orf40-201ENST00000307616 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
C11orf40-201ENST00000307616 PRPF38BQ5VTL8 546 aaKnown RBP11.88□□□□□ -0.51
C11orf40-201ENST00000307616 ANKLE1Q8NAG6 615 aa11.88□□□□□ -0.51
C11orf40-201ENST00000307616 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
C11orf40-201ENST00000307616 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
C11orf40-201ENST00000307616 MMP16P51512 607 aa11.87□□□□□ -0.51
C11orf40-201ENST00000307616 PRR7Q8TB68 274 aa11.87□□□□□ -0.51
C11orf40-201ENST00000307616 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
C11orf40-201ENST00000307616 NUTM2BA6NNL0 878 aaPredicted RBP11.86□□□□□ -0.51
C11orf40-201ENST00000307616 NUTM2EB1AL46 878 aaPredicted RBP11.86□□□□□ -0.51
C11orf40-201ENST00000307616 LILRB3O75022 631 aa11.86□□□□□ -0.51
C11orf40-201ENST00000307616 DXOO77932 396 aaKnown RBP11.86□□□□□ -0.51
C11orf40-201ENST00000307616 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
C11orf40-201ENST00000307616 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
C11orf40-201ENST00000307616 FCF1Q9Y324 198 aaKnown RBP11.86□□□□□ -0.51
C11orf40-201ENST00000307616 JUNDP17535 347 aa11.85□□□□□ -0.51
C11orf40-201ENST00000307616 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
C11orf40-201ENST00000307616 RGS20O76081 388 aa11.84□□□□□ -0.51
C11orf40-201ENST00000307616 PLA2G2CQ5R387 149 aa11.84□□□□□ -0.51
C11orf40-201ENST00000307616 RTL5Q5HYW3 569 aaPredicted RBP11.83□□□□□ -0.52
C11orf40-201ENST00000307616 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.83□□□□□ -0.52
C11orf40-201ENST00000307616 PRKD2Q9BZL6 878 aa11.83□□□□□ -0.52
C11orf40-201ENST00000307616 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
C11orf40-201ENST00000307616 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
C11orf40-201ENST00000307616 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
C11orf40-201ENST00000307616 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
C11orf40-201ENST00000307616 CCDC24Q8N4L8 307 aa11.8□□□□□ -0.52
C11orf40-201ENST00000307616 TSC1Q92574 1164 aa11.8□□□□□ -0.52
C11orf40-201ENST00000307616 SLC19A1P41440 591 aa11.78□□□□□ -0.52
C11orf40-201ENST00000307616 DESI1Q6ICB0 168 aa11.78□□□□□ -0.52
C11orf40-201ENST00000307616 LIAT1Q6ZQX7 453 aa11.78□□□□□ -0.52
C11orf40-201ENST00000307616 NUDT12Q9BQG2 462 aa11.78□□□□□ -0.52
C11orf40-201ENST00000307616 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.53
C11orf40-201ENST00000307616 PTPRNQ16849 979 aa11.75□□□□□ -0.53
C11orf40-201ENST00000307616 PPP2R2DQ66LE6 453 aa11.75□□□□□ -0.53
C11orf40-201ENST00000307616 CCNYL3P0C7X3 344 aa11.74□□□□□ -0.53
C11orf40-201ENST00000307616 LYPD8Q6UX82 237 aa11.74□□□□□ -0.53
C11orf40-201ENST00000307616 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
C11orf40-201ENST00000307616 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
C11orf40-201ENST00000307616 PER1O15534 1290 aaPredicted RBP11.72□□□□□ -0.53
C11orf40-201ENST00000307616 SPRYD7Q5W111 196 aa11.72□□□□□ -0.53
C11orf40-201ENST00000307616 RPIAP49247 311 aa11.71□□□□□ -0.53
C11orf40-201ENST00000307616 PTCRAQ6ISU1 281 aaPredicted RBP11.71□□□□□ -0.53
C11orf40-201ENST00000307616 EVA1BQ9NVM1 165 aa11.71□□□□□ -0.53
C11orf40-201ENST00000307616 RFC5P40937 340 aa11.7□□□□□ -0.54
C11orf40-201ENST00000307616 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
C11orf40-201ENST00000307616 AP1G2O75843 785 aa11.68□□□□□ -0.54
C11orf40-201ENST00000307616 CTHP32929 405 aa11.68□□□□□ -0.54
C11orf40-201ENST00000307616 KCNH2Q12809 1159 aa11.68□□□□□ -0.54
C11orf40-201ENST00000307616 ZNF697Q5TEC3 545 aa11.68□□□□□ -0.54
C11orf40-201ENST00000307616 ZNF598Q86UK7 904 aaKnown RBP11.68□□□□□ -0.54
C11orf40-201ENST00000307616 CD2BP2O95400 341 aaKnown RBP11.67□□□□□ -0.54
C11orf40-201ENST00000307616 TRIM32Q13049 653 aa11.67□□□□□ -0.54
C11orf40-201ENST00000307616 MAP10Q9P2G4 905 aa11.67□□□□□ -0.54
C11orf40-201ENST00000307616 F12P00748 615 aaPredicted RBP11.66□□□□□ -0.54
C11orf40-201ENST00000307616 UNC93B1Q9H1C4 597 aa11.66□□□□□ -0.54
C11orf40-201ENST00000307616 LRRN4Q8WUT4 740 aa11.65□□□□□ -0.54
C11orf40-201ENST00000307616 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
C11orf40-201ENST00000307616 TMEM259Q4ZIN3 620 aa11.61□□□□□ -0.55
C11orf40-201ENST00000307616 FOXC1Q12948 553 aa11.6□□□□□ -0.55
C11orf40-201ENST00000307616 TRIM67Q6ZTA4 783 aa11.6□□□□□ -0.55
C11orf40-201ENST00000307616 BAP1Q92560 729 aa11.6□□□□□ -0.55
C11orf40-201ENST00000307616 IRX2Q9BZI1 471 aaPredicted RBP11.6□□□□□ -0.55
C11orf40-201ENST00000307616 SKOR1P84550 965 aa11.59□□□□□ -0.55
C11orf40-201ENST00000307616 LINC01559Q495D7 138 aa11.59□□□□□ -0.55
C11orf40-201ENST00000307616 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
C11orf40-201ENST00000307616 TNFRSF10AO00220 468 aa11.58□□□□□ -0.56
C11orf40-201ENST00000307616 GDF9O60383 454 aa11.58□□□□□ -0.56
C11orf40-201ENST00000307616 HMX1Q9NP08 348 aaPredicted RBP11.58□□□□□ -0.56
C11orf40-201ENST00000307616 PKD2L1Q9P0L9 805 aa11.58□□□□□ -0.56
C11orf40-201ENST00000307616 GFRA3O60609 400 aa11.57□□□□□ -0.56
C11orf40-201ENST00000307616 SH3BP2P78314 561 aa11.57□□□□□ -0.56
C11orf40-201ENST00000307616 NR6A1Q15406 480 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms