RNA–Protein interactions for RNA: ENST00000302979.4

POLR1D-201, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR1D, Length 1,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-201ENST00000302979 ROBO1Q9Y6N7 1651 aa37.69■■■■□ 3.62
POLR1D-201ENST00000302979 CADPS2Q86UW7 1296 aa37.68■■■■□ 3.62
POLR1D-201ENST00000302979 RALGAPBQ86X10 1494 aa37.68■■■■□ 3.62
POLR1D-201ENST00000302979 MST1RQ04912 1400 aa37.68■■■■□ 3.62
POLR1D-201ENST00000302979 PRAM1Q96QH2 718 aa37.67■■■■□ 3.62
POLR1D-201ENST00000302979 ADGRB2O60241 1585 aa37.66■■■■□ 3.62
POLR1D-201ENST00000302979 ATF3P18847 181 aa37.65■■■■□ 3.62
POLR1D-201ENST00000302979 SCAF1Q9H7N4 1312 aaKnown RBP37.64■■■■□ 3.62
POLR1D-201ENST00000302979 GPRASP1Q5JY77 1395 aa37.64■■■■□ 3.62
POLR1D-201ENST00000302979 ROCK2O75116 1388 aaKnown RBP37.63■■■■□ 3.61
POLR1D-201ENST00000302979 SLAIN2Q9P270 581 aa37.62■■■■□ 3.61
POLR1D-201ENST00000302979 FMN2Q9NZ56 1722 aa37.61■■■■□ 3.61
POLR1D-201ENST00000302979 TIMELESSQ9UNS1 1208 aa37.61■■■■□ 3.61
POLR1D-201ENST00000302979 SAFB2Q14151 953 aaKnown RBP eCLIP37.58■■■■□ 3.61
POLR1D-201ENST00000302979 POGKQ9P215 609 aa37.57■■■■□ 3.6
POLR1D-201ENST00000302979 C1orf167Q5SNV9 1468 aa37.55■■■■□ 3.6
POLR1D-201ENST00000302979 QRICH2Q9H0J4 1663 aa37.53■■■■□ 3.6
POLR1D-201ENST00000302979 BRINP3Q76B58 766 aa37.47■■■■□ 3.59
POLR1D-201ENST00000302979 AHDC1Q5TGY3 1603 aaPredicted RBP37.47■■■■□ 3.59
POLR1D-201ENST00000302979 USP32Q8NFA0 1604 aa37.47■■■■□ 3.59
POLR1D-201ENST00000302979 MINK1Q8N4C8 1332 aaPredicted RBP37.46■■■■□ 3.59
POLR1D-201ENST00000302979 HSPA1LP34931 641 aa37.46■■■■□ 3.59
POLR1D-201ENST00000302979 NHSL1Q5SYE7 1610 aa37.46■■■■□ 3.59
POLR1D-201ENST00000302979 HIRIP3Q9BW71 556 aaPredicted RBP37.44■■■■□ 3.58
POLR1D-201ENST00000302979 CENPJQ9HC77 1338 aaPredicted RBP37.43■■■■□ 3.58
POLR1D-201ENST00000302979 RGPD8O14715 1765 aaPredicted RBP37.43■■■■□ 3.58
POLR1D-201ENST00000302979 CARD11Q9BXL7 1154 aa37.43■■■■□ 3.58
POLR1D-201ENST00000302979 PHLPP1O60346 1717 aa37.43■■■■□ 3.58
POLR1D-201ENST00000302979 COL16A1Q07092 1604 aaPredicted RBP37.4■■■■□ 3.58
POLR1D-201ENST00000302979 TULP4Q9NRJ4 1543 aa37.4■■■■□ 3.58
POLR1D-201ENST00000302979 EIF3AQ14152 1382 aaKnown RBP37.4■■■■□ 3.58
POLR1D-201ENST00000302979 ANKARQ7Z5J8 1434 aa37.37■■■■□ 3.57
POLR1D-201ENST00000302979 NUTM2FA1L443 756 aa37.37■■■■□ 3.57
POLR1D-201ENST00000302979 ORAI2Q96SN7 254 aa37.37■■■■□ 3.57
POLR1D-201ENST00000302979 WASLO00401 505 aaPredicted RBP37.35■■■■□ 3.57
POLR1D-201ENST00000302979 KIF1AQ12756 1690 aa37.34■■■■□ 3.57
POLR1D-201ENST00000302979 ATP7BP35670 1465 aa37.33■■■■□ 3.57
POLR1D-201ENST00000302979 PRR36Q9H6K5 1346 aa37.31■■■■□ 3.56
POLR1D-201ENST00000302979 TOPAZ1Q8N9V7 1692 aa37.31■■■■□ 3.56
POLR1D-201ENST00000302979 ITSN1Q15811 1721 aa37.28■■■■□ 3.56
POLR1D-201ENST00000302979 ESCO1Q5FWF5 840 aa37.28■■■■□ 3.56
POLR1D-201ENST00000302979 SBNO2Q9Y2G9 1366 aa37.28■■■■□ 3.56
POLR1D-201ENST00000302979 DDX17Q92841 729 aaKnown RBP37.26■■■■□ 3.56
POLR1D-201ENST00000302979 CDK19Q9BWU1 502 aa37.23■■■■□ 3.55
POLR1D-201ENST00000302979 USP47Q96K76 1375 aa37.22■■■■□ 3.55
POLR1D-201ENST00000302979 PXDNQ92626 1479 aa37.2■■■■□ 3.55
POLR1D-201ENST00000302979 SHPRHQ149N8 1683 aa37.18■■■■□ 3.54
POLR1D-201ENST00000302979 SOS2Q07890 1332 aaPredicted RBP37.17■■■■□ 3.54
POLR1D-201ENST00000302979 PHF8Q9UPP1 1060 aa37.17■■■■□ 3.54
POLR1D-201ENST00000302979 NPHP3Q7Z494 1330 aa37.15■■■■□ 3.54
POLR1D-201ENST00000302979 NUDT16Q96DE0 195 aaKnown RBP37.15■■■■□ 3.54
POLR1D-201ENST00000302979 FOXO3O43524 673 aa37.14■■■■□ 3.54
POLR1D-201ENST00000302979 EVC2Q86UK5 1308 aa37.13■■■■□ 3.54
POLR1D-201ENST00000302979 ST20-MTHFSA0A0A6YYL1 179 aa37.13■■■■□ 3.53
POLR1D-201ENST00000302979 TESK2Q96S53 571 aa37.12■■■■□ 3.53
POLR1D-201ENST00000302979 CABP2Q9NPB3 220 aa37.12■■■■□ 3.53
POLR1D-201ENST00000302979 JCADQ9P266 1359 aa37.11■■■■□ 3.53
POLR1D-201ENST00000302979 SRPK2P78362 688 aaKnown RBP37.1■■■■□ 3.53
POLR1D-201ENST00000302979 PMFBP1Q8TBY8 1022 aa37.09■■■■□ 3.53
POLR1D-201ENST00000302979 TRPM3Q9HCF6 1732 aaPredicted RBP37.07■■■■□ 3.53
POLR1D-201ENST00000302979 XPCQ01831 940 aaPredicted RBP37.06■■■■□ 3.52
POLR1D-201ENST00000302979 CCDC61Q9Y6R9 512 aa37.06■■■■□ 3.52
POLR1D-201ENST00000302979 PPIP5K1Q6PFW1 1433 aa37.05■■■■□ 3.52
POLR1D-201ENST00000302979 MED1Q15648 1581 aaPredicted RBP37.04■■■■□ 3.52
POLR1D-201ENST00000302979 LRRC59Q96AG4 307 aaKnown RBP37.03■■■■□ 3.52
POLR1D-201ENST00000302979 POLR3AO14802 1390 aaPredicted RBP37.03■■■■□ 3.52
POLR1D-201ENST00000302979 PNPLA6Q8IY17 1366 aa37.03■■■■□ 3.52
POLR1D-201ENST00000302979 COL22A1Q8NFW1 1626 aaPredicted RBP37.02■■■■□ 3.52
POLR1D-201ENST00000302979 ATAD2Q6PL18 1390 aa37■■■■□ 3.51
POLR1D-201ENST00000302979 PLEKHG3A1L390 1219 aa36.99■■■■□ 3.51
POLR1D-201ENST00000302979 KRT28Q7Z3Y7 464 aa36.98■■■■□ 3.51
POLR1D-201ENST00000302979 DISP3Q9P2K9 1392 aa36.97■■■■□ 3.51
POLR1D-201ENST00000302979 ALS2Q96Q42 1657 aa36.96■■■■□ 3.51
POLR1D-201ENST00000302979 TNS3Q68CZ2 1445 aa36.96■■■■□ 3.51
POLR1D-201ENST00000302979 LRP6O75581 1613 aa36.96■■■■□ 3.51
POLR1D-201ENST00000302979 SBNO1A3KN83 1393 aa36.95■■■■□ 3.51
POLR1D-201ENST00000302979 ACEP12821 1306 aa36.95■■■■□ 3.51
POLR1D-201ENST00000302979 NGDNQ8NEJ9 315 aaKnown RBP36.95■■■■□ 3.51
POLR1D-201ENST00000302979 AKAP12Q02952 1782 aa36.94■■■■□ 3.5
POLR1D-201ENST00000302979 SPATA31A3Q5VYP0 1347 aa36.93■■■■□ 3.5
POLR1D-201ENST00000302979 PSME1Q06323 249 aa36.93■■■■□ 3.5
POLR1D-201ENST00000302979 SPATA31A6Q5VVP1 1343 aa36.92■■■■□ 3.5
POLR1D-201ENST00000302979 CABP1Q9NZU7 370 aa36.92■■■■□ 3.5
POLR1D-201ENST00000302979 EIF4G2P78344 907 aaKnown RBP eCLIP36.9■■■■□ 3.5
POLR1D-201ENST00000302979 PUS7Q96PZ0 661 aaKnown RBP36.9■■■■□ 3.5
POLR1D-201ENST00000302979 SLC24A1O60721 1099 aa36.89■■■■□ 3.5
POLR1D-201ENST00000302979 HSPA5P11021 654 aaKnown RBP36.89■■■■□ 3.5
POLR1D-201ENST00000302979 ABCA3Q99758 1704 aa36.87■■■■□ 3.49
POLR1D-201ENST00000302979 NRKQ7Z2Y5 1582 aa36.87■■■■□ 3.49
POLR1D-201ENST00000302979 TMF1P82094 1093 aa36.86■■■■□ 3.49
POLR1D-201ENST00000302979 CD163L1Q9NR16 1453 aa36.86■■■■□ 3.49
POLR1D-201ENST00000302979 MON2Q7Z3U7 1717 aa36.85■■■■□ 3.49
POLR1D-201ENST00000302979 USP6P35125 1406 aa36.85■■■■□ 3.49
POLR1D-201ENST00000302979 CPSF1Q10570 1443 aaKnown RBP36.84■■■■□ 3.49
POLR1D-201ENST00000302979 CRYBG1Q9Y4K1 1723 aa36.83■■■■□ 3.49
POLR1D-201ENST00000302979 MYOM1P52179 1685 aa36.82■■■■□ 3.48
POLR1D-201ENST00000302979 ARHGEF10O15013 1369 aa36.81■■■■□ 3.48
POLR1D-201ENST00000302979 SSH2Q76I76 1423 aa36.8■■■■□ 3.48
POLR1D-201ENST00000302979 NINLQ9Y2I6 1382 aa36.77■■■■□ 3.48
POLR1D-201ENST00000302979 BRD4O60885 1362 aaPredicted RBP36.76■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms