RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 GSE1Q14687 1217 aa17.89■□□□□ 0.45
SDC2-201ENST00000302190 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.45
SDC2-201ENST00000302190 SIGLEC1Q9BZZ2 1709 aa17.88■□□□□ 0.45
SDC2-201ENST00000302190 FRAT2O75474 233 aaPredicted RBP17.88■□□□□ 0.45
SDC2-201ENST00000302190 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
SDC2-201ENST00000302190 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
SDC2-201ENST00000302190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.453e-8■■□□□ 13.2
SDC2-201ENST00000302190 MYH16Q9H6N6 1097 aa17.87■□□□□ 0.45
SDC2-201ENST00000302190 BCORL1Q5H9F3 1711 aa17.87■□□□□ 0.45
SDC2-201ENST00000302190 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
SDC2-201ENST00000302190 E9PSI1 815 aa17.86■□□□□ 0.45
SDC2-201ENST00000302190 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
SDC2-201ENST00000302190 MAGI2Q86UL8 1455 aa17.84■□□□□ 0.45
SDC2-201ENST00000302190 RWDD1Q9H446 243 aaPredicted RBP17.84■□□□□ 0.45
SDC2-201ENST00000302190 DISP3Q9P2K9 1392 aa17.84■□□□□ 0.45
SDC2-201ENST00000302190 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.45
SDC2-201ENST00000302190 MTHFSP49914 203 aa17.83■□□□□ 0.45
SDC2-201ENST00000302190 CLTCL1P53675 1640 aa17.83■□□□□ 0.45
SDC2-201ENST00000302190 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
SDC2-201ENST00000302190 GGNBP2Q9H3C7 697 aa17.82■□□□□ 0.44
SDC2-201ENST00000302190 MINK1Q8N4C8 1332 aaPredicted RBP17.82■□□□□ 0.44
SDC2-201ENST00000302190 ABCC3O15438 1527 aa17.82■□□□□ 0.44
SDC2-201ENST00000302190 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
SDC2-201ENST00000302190 VSIG10Q8N0Z9 540 aa17.81■□□□□ 0.44
SDC2-201ENST00000302190 ANP32BQ92688 251 aaKnown RBP17.81■□□□□ 0.44
SDC2-201ENST00000302190 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
SDC2-201ENST00000302190 NAP1L5Q96NT1 182 aaPredicted RBP17.8■□□□□ 0.44
SDC2-201ENST00000302190 NOS1P29475 1434 aa17.8■□□□□ 0.44
SDC2-201ENST00000302190 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
SDC2-201ENST00000302190 EIF3AQ14152 1382 aaKnown RBP17.8■□□□□ 0.44
SDC2-201ENST00000302190 PRAG1Q86YV5 1406 aa17.8■□□□□ 0.44
SDC2-201ENST00000302190 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
SDC2-201ENST00000302190 HSCBQ8IWL3 235 aa17.79■□□□□ 0.44
SDC2-201ENST00000302190 DEPDC5O75140 1603 aa17.78■□□□□ 0.44
SDC2-201ENST00000302190 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
SDC2-201ENST00000302190 TRIM44Q96DX7 344 aaPredicted RBP17.78■□□□□ 0.44
SDC2-201ENST00000302190 TET3O43151 1660 aa17.78■□□□□ 0.44
SDC2-201ENST00000302190 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
SDC2-201ENST00000302190 SPHKAPQ2M3C7 1700 aa17.77■□□□□ 0.44
SDC2-201ENST00000302190 ZMYM3Q14202 1370 aa17.77■□□□□ 0.44
SDC2-201ENST00000302190 RSPH6AQ9H0K4 717 aa17.77■□□□□ 0.43
SDC2-201ENST00000302190 CGNL1Q0VF96 1302 aa17.76■□□□□ 0.43
SDC2-201ENST00000302190 DUSP27Q5VZP5 1158 aa17.75■□□□□ 0.43
SDC2-201ENST00000302190 PODXL2Q9NZ53 605 aa17.75■□□□□ 0.43
SDC2-201ENST00000302190 PTPRTO14522 1441 aa17.74■□□□□ 0.43
SDC2-201ENST00000302190 CLTCQ00610 1675 aaKnown RBP17.74■□□□□ 0.43
SDC2-201ENST00000302190 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
SDC2-201ENST00000302190 TESK2Q96S53 571 aa17.74■□□□□ 0.43
SDC2-201ENST00000302190 LNPKQ9C0E8 428 aa17.74■□□□□ 0.43
SDC2-201ENST00000302190 RNF17Q9BXT8 1623 aaKnown RBP17.73■□□□□ 0.43
SDC2-201ENST00000302190 VWDEQ8N2E2 1590 aa17.73■□□□□ 0.43
SDC2-201ENST00000302190 TRPM2O94759 1503 aa17.73■□□□□ 0.43
SDC2-201ENST00000302190 EIF2AK4Q9P2K8 1649 aaKnown RBP17.73■□□□□ 0.43
SDC2-201ENST00000302190 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
SDC2-201ENST00000302190 HMOX1P09601 288 aa17.72■□□□□ 0.43
SDC2-201ENST00000302190 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
SDC2-201ENST00000302190 PER1O15534 1290 aaPredicted RBP17.71■□□□□ 0.43
SDC2-201ENST00000302190 CAMSAP1Q5T5Y3 1602 aa17.71■□□□□ 0.43
SDC2-201ENST00000302190 UHRF1BP1Q6BDS2 1440 aa17.71■□□□□ 0.43
SDC2-201ENST00000302190 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
SDC2-201ENST00000302190 RBM33Q96EV2 1170 aaKnown RBP17.71■□□□□ 0.43
SDC2-201ENST00000302190 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SDC2-201ENST00000302190 ANKRD45Q5TZF3 282 aa17.7■□□□□ 0.42
SDC2-201ENST00000302190 SLC26A8Q96RN1 970 aa17.7■□□□□ 0.42
SDC2-201ENST00000302190 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
SDC2-201ENST00000302190 MROH2AA6NES4 1674 aa17.7■□□□□ 0.42
SDC2-201ENST00000302190 RIPK4P57078 832 aa17.7■□□□□ 0.42
SDC2-201ENST00000302190 DZIP1LQ8IYY4 767 aaKnown RBP17.69■□□□□ 0.42
SDC2-201ENST00000302190 ZMYM4Q5VZL5 1548 aa17.69■□□□□ 0.42
SDC2-201ENST00000302190 HDGFL2Q7Z4V5 671 aaPredicted RBP17.69■□□□□ 0.42
SDC2-201ENST00000302190 IGHDP01880 384 aa17.68■□□□□ 0.42
SDC2-201ENST00000302190 TNNQ9UQP3 1299 aa17.68■□□□□ 0.42
SDC2-201ENST00000302190 FOXD4L5Q5VV16 416 aaPredicted RBP17.68■□□□□ 0.42
SDC2-201ENST00000302190 FOXD4L4Q8WXT5 416 aaPredicted RBP17.68■□□□□ 0.42
SDC2-201ENST00000302190 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
SDC2-201ENST00000302190 WWC1Q8IX03 1113 aa17.68■□□□□ 0.42
SDC2-201ENST00000302190 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
SDC2-201ENST00000302190 C1orf115Q9H7X2 142 aa17.67■□□□□ 0.42
SDC2-201ENST00000302190 SYNMO15061 1565 aa17.67■□□□□ 0.42
SDC2-201ENST00000302190 NOL8Q76FK4 1167 aaKnown RBP17.67■□□□□ 0.42
SDC2-201ENST00000302190 SLC52A1Q9NWF4 448 aa17.67■□□□□ 0.42
SDC2-201ENST00000302190 ZMYND15Q9H091 742 aa17.66■□□□□ 0.42
SDC2-201ENST00000302190 GOLGA6L22H0YM25 854 aa17.66■□□□□ 0.42
SDC2-201ENST00000302190 ARHGEF40Q8TER5 1519 aa17.66■□□□□ 0.42
SDC2-201ENST00000302190 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
SDC2-201ENST00000302190 MYO5BQ9ULV0 1848 aa17.65■□□□□ 0.42
SDC2-201ENST00000302190 VGFO15240 615 aaPredicted RBP17.65■□□□□ 0.42
SDC2-201ENST00000302190 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
SDC2-201ENST00000302190 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
SDC2-201ENST00000302190 KIF1BO60333 1816 aa17.64■□□□□ 0.41
SDC2-201ENST00000302190 PLEKHH1Q9ULM0 1364 aa17.64■□□□□ 0.41
SDC2-201ENST00000302190 DMRT2Q9Y5R5 561 aa17.64■□□□□ 0.41
SDC2-201ENST00000302190 EVC2Q86UK5 1308 aa17.63■□□□□ 0.41
SDC2-201ENST00000302190 GOLGA6L3A6NEY3 463 aa17.63■□□□□ 0.41
SDC2-201ENST00000302190 FBLN1P23142 703 aa17.63■□□□□ 0.41
SDC2-201ENST00000302190 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
SDC2-201ENST00000302190 FOXD4L6Q3SYB3 417 aaPredicted RBP17.63■□□□□ 0.41
SDC2-201ENST00000302190 FOXD4L3Q6VB84 417 aaPredicted RBP17.63■□□□□ 0.41
SDC2-201ENST00000302190 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
SDC2-201ENST00000302190 ERVK-7P63135 1459 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms