RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 CAGE1Q8TC20 777 aa12.05□□□□□ -0.48
TRIM44-201ENST00000299413 RIPK4P57078 832 aa12.04□□□□□ -0.48
TRIM44-201ENST00000299413 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
TRIM44-201ENST00000299413 CABP2Q9NPB3 220 aa12.04□□□□□ -0.48
TRIM44-201ENST00000299413 WASHC2AQ641Q2 1341 aa12.04□□□□□ -0.48
TRIM44-201ENST00000299413 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
TRIM44-201ENST00000299413 BRPF1P55201 1214 aaPredicted RBP12.03□□□□□ -0.48
TRIM44-201ENST00000299413 WDR78Q5VTH9 848 aa12.03□□□□□ -0.48
TRIM44-201ENST00000299413 HOOK1Q9UJC3 728 aaKnown RBP12.03□□□□□ -0.48
TRIM44-201ENST00000299413 COG6Q9Y2V7 657 aa12.03□□□□□ -0.48
TRIM44-201ENST00000299413 TTC16Q8NEE8 873 aa12.03□□□□□ -0.48
TRIM44-201ENST00000299413 ZSCAN29Q8IWY8 852 aaPredicted RBP12.02□□□□□ -0.48
TRIM44-201ENST00000299413 RUFY1Q96T51 708 aa12.02□□□□□ -0.48
TRIM44-201ENST00000299413 BRMS1Q9HCU9 246 aa12.02□□□□□ -0.48
TRIM44-201ENST00000299413 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
TRIM44-201ENST00000299413 CEBPZQ03701 1054 aaKnown RBP12.02□□□□□ -0.49
TRIM44-201ENST00000299413 WWC3Q9ULE0 1092 aa12.02□□□□□ -0.49
TRIM44-201ENST00000299413 SEPT11Q9NVA2 429 aaKnown RBP12.02□□□□□ -0.49
TRIM44-201ENST00000299413 CNNM1Q9NRU3 951 aa12.01□□□□□ -0.49
TRIM44-201ENST00000299413 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
TRIM44-201ENST00000299413 RBM19Q9Y4C8 960 aaKnown RBP12.01□□□□□ -0.49
TRIM44-201ENST00000299413 RAB3GAP2Q9H2M9 1393 aa12.01□□□□□ -0.49
TRIM44-201ENST00000299413 NACADO15069 1562 aa12.01□□□□□ -0.49
TRIM44-201ENST00000299413 PSMD1Q99460 953 aa12.01□□□□□ -0.49
TRIM44-201ENST00000299413 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
TRIM44-201ENST00000299413 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 OSCARQ8IYS5 282 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 MYL6BP14649 208 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 TTC39AQ5SRH9 613 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 SIL1Q9H173 461 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 ST20-MTHFSA0A0A6YYL1 179 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 ANKRD62A6NC57 917 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 TOM1L2Q6ZVM7 507 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
TRIM44-201ENST00000299413 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
TRIM44-201ENST00000299413 CRBNQ96SW2 442 aa11.99□□□□□ -0.49
TRIM44-201ENST00000299413 NLRP6P59044 892 aa11.99□□□□□ -0.49
TRIM44-201ENST00000299413 SCLT1Q96NL6 688 aa11.99□□□□□ -0.49
TRIM44-201ENST00000299413 PROSER2Q86WR7 435 aaPredicted RBP11.99□□□□□ -0.49
TRIM44-201ENST00000299413 FSD1Q9BTV5 496 aa11.99□□□□□ -0.49
TRIM44-201ENST00000299413 ZNF771Q7L3S4 317 aaPredicted RBP11.99□□□□□ -0.49
TRIM44-201ENST00000299413 RNF20Q5VTR2 975 aa11.98□□□□□ -0.49
TRIM44-201ENST00000299413 DIAPH1O60610 1272 aaKnown RBP11.98□□□□□ -0.49
TRIM44-201ENST00000299413 NEBLO76041 1014 aa11.98□□□□□ -0.49
TRIM44-201ENST00000299413 ADAMTS2O95450 1211 aa11.97□□□□□ -0.49
TRIM44-201ENST00000299413 SSR1P43307 286 aaKnown RBP11.97□□□□□ -0.49
TRIM44-201ENST00000299413 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
TRIM44-201ENST00000299413 PDE3BQ13370 1112 aa11.97□□□□□ -0.49
TRIM44-201ENST00000299413 PLCD4Q9BRC7 762 aa11.97□□□□□ -0.49
TRIM44-201ENST00000299413 SMC3Q9UQE7 1217 aa11.97□□□□□ -0.49
TRIM44-201ENST00000299413 SLC3A2P08195 630 aaKnown RBP11.97□□□□□ -0.49
TRIM44-201ENST00000299413 SYCP1Q15431 976 aa11.96□□□□□ -0.49
TRIM44-201ENST00000299413 L3MBTL2Q969R5 705 aa11.96□□□□□ -0.49
TRIM44-201ENST00000299413 NEFHP12036 1026 aa11.96□□□□□ -0.49
TRIM44-201ENST00000299413 CCDC18Q5T9S5 1454 aa11.96□□□□□ -0.49
TRIM44-201ENST00000299413 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
TRIM44-201ENST00000299413 SSBP05455 408 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRIM44-201ENST00000299413 DDX11L8A8MPP1 907 aa11.96□□□□□ -0.49
TRIM44-201ENST00000299413 PDCL3Q9H2J4 239 aa11.96□□□□□ -0.49
TRIM44-201ENST00000299413 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.5
TRIM44-201ENST00000299413 TMEM132EQ6IEE7 984 aa11.96□□□□□ -0.5
TRIM44-201ENST00000299413 NUP133Q8WUM0 1156 aa11.96□□□□□ -0.5
TRIM44-201ENST00000299413 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
TRIM44-201ENST00000299413 SMC2O95347 1197 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 CCDC73Q6ZRK6 1079 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 ATP6V1DQ9Y5K8 247 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 KIF15Q9NS87 1388 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 OLFM4Q6UX06 510 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 STK3Q13188 491 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 IFT57Q9NWB7 429 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 APAF1O14727 1248 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 USP5P45974 858 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 WIZO95785 1651 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 SASS6Q6UVJ0 657 aa11.95□□□□□ -0.5
TRIM44-201ENST00000299413 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
TRIM44-201ENST00000299413 C1orf115Q9H7X2 142 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 TRMT1LQ7Z2T5 733 aaKnown RBP11.94□□□□□ -0.5
TRIM44-201ENST00000299413 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 GGNBP2Q9H3C7 697 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 UACAQ9BZF9 1416 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 CABP4P57796 275 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 FMNL2Q96PY5 1086 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 GNL3LQ9NVN8 582 aaKnown RBP11.94□□□□□ -0.5
TRIM44-201ENST00000299413 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
TRIM44-201ENST00000299413 GPRASP1Q5JY77 1395 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 GPS2Q13227 327 aa11.94□□□□□ -0.5
TRIM44-201ENST00000299413 ERC2O15083 957 aa11.93□□□□□ -0.5
TRIM44-201ENST00000299413 RDXP35241 583 aaKnown RBP11.93□□□□□ -0.5
TRIM44-201ENST00000299413 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 XBP1P17861 261 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 REC8O95072 547 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 HSP90AB4PQ58FF6 505 aa11.92□□□□□ -0.5
TRIM44-201ENST00000299413 CALRP27797 417 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms