RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 INCENPQ9NQS7 918 aa10.92□□□□□ -0.66
SMC2-201ENST00000286398 HSP90AB2PQ58FF8 381 aa10.92□□□□□ -0.66
SMC2-201ENST00000286398 GRPEL1Q9HAV7 217 aa10.92□□□□□ -0.66
SMC2-201ENST00000286398 KINO60870 393 aaKnown RBP10.91□□□□□ -0.66
SMC2-201ENST00000286398 MPNDQ8N594 471 aa10.91□□□□□ -0.66
SMC2-201ENST00000286398 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.91□□□□□ -0.66
SMC2-201ENST00000286398 EIF3JO75822 258 aaKnown RBP10.91□□□□□ -0.66
SMC2-201ENST00000286398 CDC45O75419 566 aa10.91□□□□□ -0.66
SMC2-201ENST00000286398 NFXL1Q6ZNB6 911 aa10.91□□□□□ -0.66
SMC2-201ENST00000286398 IPO4Q8TEX9 1081 aaKnown RBP10.91□□□□□ -0.66
SMC2-201ENST00000286398 LTV1Q96GA3 475 aaPredicted RBP10.91□□□□□ -0.66
SMC2-201ENST00000286398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMC2-201ENST00000286398 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
SMC2-201ENST00000286398 NGEFQ8N5V2 710 aa10.91□□□□□ -0.66
SMC2-201ENST00000286398 TICAM2Q86XR7 235 aa10.9□□□□□ -0.66
SMC2-201ENST00000286398 TCEAL9Q9UHQ7 104 aa10.9□□□□□ -0.66
SMC2-201ENST00000286398 ERLIN1O75477 346 aa10.9□□□□□ -0.66
SMC2-201ENST00000286398 CCDC27Q2M243 656 aa10.9□□□□□ -0.66
SMC2-201ENST00000286398 ZFYVE27Q5T4F4 411 aa10.9□□□□□ -0.66
SMC2-201ENST00000286398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMC2-201ENST00000286398 SMARCE1Q969G3 411 aa10.9□□□□□ -0.66
SMC2-201ENST00000286398 GOLGA6L10A6NI86 522 aa10.89□□□□□ -0.67
SMC2-201ENST00000286398 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMC2-201ENST00000286398 FIBPO43427 364 aa10.89□□□□□ -0.67
SMC2-201ENST00000286398 DHX16O60231 1041 aaKnown RBP10.89□□□□□ -0.67
SMC2-201ENST00000286398 FILIP1LQ4L180 1135 aa10.89□□□□□ -0.67
SMC2-201ENST00000286398 PDCL2Q8N4E4 241 aa10.89□□□□□ -0.67
SMC2-201ENST00000286398 AAMPQ13685 434 aa10.88□□□□□ -0.67
SMC2-201ENST00000286398 EPS15P42566 896 aa10.88□□□□□ -0.67
SMC2-201ENST00000286398 UBE2Q2Q8WVN8 375 aa10.88□□□□□ -0.67
SMC2-201ENST00000286398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.88□□□□□ -0.676e-6■■■■■ 48.1
SMC2-201ENST00000286398 TRERF1Q96PN7 1200 aa10.88□□□□□ -0.67
SMC2-201ENST00000286398 ROCK1Q13464 1354 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 NEK4P51957 841 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 RALYLQ86SE5 291 aaKnown RBP10.87□□□□□ -0.67
SMC2-201ENST00000286398 ERICH2A1L162 156 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 PDCP20941 246 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 CLASRPQ8N2M8 674 aaKnown RBP10.87□□□□□ -0.67
SMC2-201ENST00000286398 CGNQ9P2M7 1197 aaKnown RBP10.87□□□□□ -0.67
SMC2-201ENST00000286398 NGDNQ8NEJ9 315 aaKnown RBP10.87□□□□□ -0.67
SMC2-201ENST00000286398 RAD21O60216 631 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMC2-201ENST00000286398 DHX8Q14562 1220 aaKnown RBP10.87□□□□□ -0.67
SMC2-201ENST00000286398 AMOTL1Q8IY63 956 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 ERC2O15083 957 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 CCDC192P0DO97 292 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 BRPF1P55201 1214 aaPredicted RBP10.87□□□□□ -0.67
SMC2-201ENST00000286398 PANK1Q8TE04 598 aa10.87□□□□□ -0.67
SMC2-201ENST00000286398 ERLIN2O94905 339 aa10.86□□□□□ -0.67
SMC2-201ENST00000286398 MCM2P49736 904 aa10.86□□□□□ -0.67
SMC2-201ENST00000286398 ZMYND15Q9H091 742 aa10.86□□□□□ -0.67
SMC2-201ENST00000286398 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
SMC2-201ENST00000286398 CBX1P83916 185 aa10.86□□□□□ -0.67
SMC2-201ENST00000286398 TEFQ10587 303 aa10.86□□□□□ -0.67
SMC2-201ENST00000286398 ZSCAN30Q86W11 494 aa10.86□□□□□ -0.67
SMC2-201ENST00000286398 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
SMC2-201ENST00000286398 ZHX1Q9UKY1 873 aaPredicted RBP10.86□□□□□ -0.67
SMC2-201ENST00000286398 EIF2S2P20042 333 aaKnown RBP10.85□□□□□ -0.67
SMC2-201ENST00000286398 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
SMC2-201ENST00000286398 CCDC43Q96MW1 224 aaKnown RBP10.85□□□□□ -0.67
SMC2-201ENST00000286398 RABEP1Q15276 862 aa10.85□□□□□ -0.67
SMC2-201ENST00000286398 TRAK1Q9UPV9 953 aa10.85□□□□□ -0.67
SMC2-201ENST00000286398 FKBP5Q13451 457 aaPredicted RBP10.85□□□□□ -0.67
SMC2-201ENST00000286398 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
SMC2-201ENST00000286398 PSMA5P28066 241 aa10.85□□□□□ -0.67
SMC2-201ENST00000286398 CCDC102AQ96A19 550 aa10.85□□□□□ -0.67
SMC2-201ENST00000286398 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
SMC2-201ENST00000286398 SERPINC1P01008 464 aa10.84□□□□□ -0.67
SMC2-201ENST00000286398 ANKRD62A6NC57 917 aa10.84□□□□□ -0.67
SMC2-201ENST00000286398 ENOX2Q16206 610 aaKnown RBP10.84□□□□□ -0.67
SMC2-201ENST00000286398 NOL10Q9BSC4 688 aaKnown RBP10.84□□□□□ -0.67
SMC2-201ENST00000286398 FAM193AP78312 1265 aa10.84□□□□□ -0.67
SMC2-201ENST00000286398 ZNHIT6Q9NWK9 470 aaKnown RBP10.84□□□□□ -0.67
SMC2-201ENST00000286398 SOGA1O94964 1423 aa10.84□□□□□ -0.67
SMC2-201ENST00000286398 RIPK4P57078 832 aa10.84□□□□□ -0.67
SMC2-201ENST00000286398 UBXN4Q92575 508 aa10.84□□□□□ -0.67
SMC2-201ENST00000286398 KIF7Q2M1P5 1343 aa10.84□□□□□ -0.67
SMC2-201ENST00000286398 DHX57Q6P158 1386 aaKnown RBP10.84□□□□□ -0.67
SMC2-201ENST00000286398 TAX1BP1Q86VP1 789 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 MCM4P33991 863 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 CCDC181Q5TID7 509 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 NECTIN2Q92692 538 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 ATP2B1P20020 1258 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 BACH2Q9BYV9 841 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 PPFIBP1Q86W92 1011 aa10.83□□□□□ -0.68
SMC2-201ENST00000286398 CCAR1Q8IX12 1150 aaKnown RBP10.83□□□□□ -0.68
SMC2-201ENST00000286398 LRRCC1Q9C099 1032 aa10.82□□□□□ -0.68
SMC2-201ENST00000286398 CALCOCO1Q9P1Z2 691 aa10.82□□□□□ -0.68
SMC2-201ENST00000286398 MAGEC2Q9UBF1 373 aaPredicted RBP10.82□□□□□ -0.68
SMC2-201ENST00000286398 XBP1P17861 261 aa10.82□□□□□ -0.68
SMC2-201ENST00000286398 PIP4K2AP48426 406 aaPredicted RBP10.82□□□□□ -0.68
SMC2-201ENST00000286398 TNMDQ9H2S6 317 aa10.82□□□□□ -0.68
SMC2-201ENST00000286398 STK38Q15208 465 aa10.82□□□□□ -0.68
SMC2-201ENST00000286398 SEPT7Q16181 437 aaKnown RBP10.82□□□□□ -0.68
SMC2-201ENST00000286398 PDCL3Q9H2J4 239 aa10.82□□□□□ -0.68
SMC2-201ENST00000286398 CWC22Q9HCG8 908 aaKnown RBP10.82□□□□□ -0.68
SMC2-201ENST00000286398 TMCO3Q6UWJ1 677 aa10.81□□□□□ -0.68
SMC2-201ENST00000286398 CEBPZQ03701 1054 aaKnown RBP10.81□□□□□ -0.68
SMC2-201ENST00000286398 C1orf141Q5JVX7 400 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms