RNA–Protein interactions for RNA: ENST00000284483.12

TNIK-201, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 4,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-201ENST00000284483 DDX19BQ9UMR2 479 aa11.25□□□□□ -0.61
TNIK-201ENST00000284483 TRAK1Q9UPV9 953 aa11.25□□□□□ -0.61
TNIK-201ENST00000284483 HOMEZQ8IX15 550 aa11.25□□□□□ -0.61
TNIK-201ENST00000284483 CFAP44Q96MT7 982 aa11.25□□□□□ -0.61
TNIK-201ENST00000284483 NUCB2P80303 420 aa11.24□□□□□ -0.61
TNIK-201ENST00000284483 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.61
TNIK-201ENST00000284483 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
TNIK-201ENST00000284483 FAM193AP78312 1265 aa11.24□□□□□ -0.61
TNIK-201ENST00000284483 MLECQ14165 292 aa11.24□□□□□ -0.61
TNIK-201ENST00000284483 CCAR2Q8N163 923 aaKnown RBP11.23□□□□□ -0.61
TNIK-201ENST00000284483 TIGD1Q96MW7 591 aa11.23□□□□□ -0.61
TNIK-201ENST00000284483 C1orf115Q9H7X2 142 aa11.23□□□□□ -0.61
TNIK-201ENST00000284483 CCDC39Q9UFE4 941 aa11.23□□□□□ -0.61
TNIK-201ENST00000284483 DHX29Q7Z478 1369 aaKnown RBP11.23□□□□□ -0.61
TNIK-201ENST00000284483 NLRP1Q9C000 1473 aa11.22□□□□□ -0.61
TNIK-201ENST00000284483 SPC24Q8NBT2 197 aa11.22□□□□□ -0.61
TNIK-201ENST00000284483 TBC1D32Q96NH3 1257 aa11.22□□□□□ -0.61
TNIK-201ENST00000284483 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
TNIK-201ENST00000284483 PDCL2Q8N4E4 241 aa11.22□□□□□ -0.61
TNIK-201ENST00000284483 TRERF1Q96PN7 1200 aa11.22□□□□□ -0.61
TNIK-201ENST00000284483 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
TNIK-201ENST00000284483 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
TNIK-201ENST00000284483 CNKSR2Q8WXI2 1034 aa11.21□□□□□ -0.61
TNIK-201ENST00000284483 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
TNIK-201ENST00000284483 TCP11L2Q8N4U5 519 aa11.21□□□□□ -0.61
TNIK-201ENST00000284483 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.61
TNIK-201ENST00000284483 EP400NLQ6ZTU2 488 aa11.21□□□□□ -0.62
TNIK-201ENST00000284483 FBXW7Q969H0 707 aa11.21□□□□□ -0.62
TNIK-201ENST00000284483 TNPO1Q92973 898 aaKnown RBP11.2□□□□□ -0.62
TNIK-201ENST00000284483 TSR2Q969E8 191 aaKnown RBP11.2□□□□□ -0.62
TNIK-201ENST00000284483 IGF1RP08069 1367 aa11.2□□□□□ -0.62
TNIK-201ENST00000284483 LRPPRCP42704 1394 aaKnown RBP11.2□□□□□ -0.62
TNIK-201ENST00000284483 TMED8Q6PL24 325 aaPredicted RBP11.2□□□□□ -0.62
TNIK-201ENST00000284483 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
TNIK-201ENST00000284483 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
TNIK-201ENST00000284483 CCDC66A2RUB6 948 aa11.2□□□□□ -0.62
TNIK-201ENST00000284483 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
TNIK-201ENST00000284483 GNL2Q13823 731 aaKnown RBP11.19□□□□□ -0.62
TNIK-201ENST00000284483 CCDC144AA2RUR9 1427 aa11.19□□□□□ -0.62
TNIK-201ENST00000284483 VPS37CA5D8V6 355 aaPredicted RBP11.19□□□□□ -0.62
TNIK-201ENST00000284483 GEMIN8Q9NWZ8 242 aaKnown RBP11.19□□□□□ -0.62
TNIK-201ENST00000284483 BECN2A8MW95 431 aa11.19□□□□□ -0.62
TNIK-201ENST00000284483 HSP90B1P14625 803 aaKnown RBP11.19□□□□□ -0.62
TNIK-201ENST00000284483 BCL2L12Q9HB09 334 aa11.19□□□□□ -0.62
TNIK-201ENST00000284483 GOLGA6L19H0YKK7 550 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 TULP2O00295 520 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 IGHDP01880 384 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
TNIK-201ENST00000284483 DIAPH3Q9NSV4 1193 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 SYCE3A1L190 88 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 NEK4P51957 841 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 KIF3AQ9Y496 699 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 REC8O95072 547 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 MCM5P33992 734 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.18□□□□□ -0.62
TNIK-201ENST00000284483 PDLIM2Q96JY6 352 aa11.18□□□□□ -0.62
TNIK-201ENST00000284483 HMMRO75330 724 aa11.17□□□□□ -0.62
TNIK-201ENST00000284483 SSFA2P28290 1259 aa11.17□□□□□ -0.62
TNIK-201ENST00000284483 GGT6Q6P531 493 aa11.17□□□□□ -0.62
TNIK-201ENST00000284483 ZNF622Q969S3 477 aaKnown RBP eCLIP11.17□□□□□ -0.625e-7■■■□□ 17
TNIK-201ENST00000284483 K7ELQ4 463 aaPredicted RBP11.16□□□□□ -0.62
TNIK-201ENST00000284483 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
TNIK-201ENST00000284483 RUNDC1Q96C34 613 aa11.16□□□□□ -0.62
TNIK-201ENST00000284483 YY1AP1Q9H869 796 aa11.16□□□□□ -0.62
TNIK-201ENST00000284483 ERICH4A6NGS2 130 aa11.16□□□□□ -0.62
TNIK-201ENST00000284483 FIBPO43427 364 aa11.16□□□□□ -0.62
TNIK-201ENST00000284483 GTF2F1P35269 517 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■■□ 19.9
TNIK-201ENST00000284483 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
TNIK-201ENST00000284483 PRIMPOLQ96LW4 560 aa11.16□□□□□ -0.62
TNIK-201ENST00000284483 VIRMAQ69YN4 1812 aaKnown RBP11.16□□□□□ -0.62
TNIK-201ENST00000284483 AXDND1Q5T1B0 1012 aaPredicted RBP11.15□□□□□ -0.62
TNIK-201ENST00000284483 RBSNQ9H1K0 784 aa11.15□□□□□ -0.62
TNIK-201ENST00000284483 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
TNIK-201ENST00000284483 HOMER1Q86YM7 354 aa11.15□□□□□ -0.62
TNIK-201ENST00000284483 TSPY26PQ9H489 355 aa11.15□□□□□ -0.62
TNIK-201ENST00000284483 EIF3AQ14152 1382 aaKnown RBP11.15□□□□□ -0.63
TNIK-201ENST00000284483 CDC45O75419 566 aa11.14□□□□□ -0.63
TNIK-201ENST00000284483 RTF1Q92541 710 aaKnown RBP11.14□□□□□ -0.63
TNIK-201ENST00000284483 MTHFSP49914 203 aa11.14□□□□□ -0.63
TNIK-201ENST00000284483 GABPB1Q06547 395 aaPredicted RBP11.14□□□□□ -0.63
TNIK-201ENST00000284483 CFTRP13569 1480 aa11.14□□□□□ -0.63
TNIK-201ENST00000284483 SLFN5Q08AF3 891 aa11.14□□□□□ -0.63
TNIK-201ENST00000284483 OGFRQ9NZT2 677 aa11.14□□□□□ -0.63
TNIK-201ENST00000284483 INTS3Q68E01 1043 aaKnown RBP11.14□□□□□ -0.63
TNIK-201ENST00000284483 BICD2Q8TD16 824 aa11.14□□□□□ -0.63
TNIK-201ENST00000284483 CREBRFQ8IUR6 639 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 NECTIN2Q92692 538 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 ATP6V1DQ9Y5K8 247 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 MBD3O95983 291 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 DUSP27Q5VZP5 1158 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 FEZ1Q99689 392 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 TRIM5Q9C035 493 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 FEZ2Q9UHY8 353 aaPredicted RBP11.13□□□□□ -0.63
TNIK-201ENST00000284483 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
TNIK-201ENST00000284483 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
TNIK-201ENST00000284483 RBM25P49756 843 aaKnown RBP11.12□□□□□ -0.63
TNIK-201ENST00000284483 HDGFL2Q7Z4V5 671 aaPredicted RBP11.12□□□□□ -0.63
TNIK-201ENST00000284483 CALCOCO1Q9P1Z2 691 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms