RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 LAMC3Q9Y6N6 1575 aa3.77□□□□□ -1.81
CHD1-201ENST00000284049 RBM47A0AV96 593 aaKnown RBP3.76□□□□□ -1.81
CHD1-201ENST00000284049 ATP2B2Q01814 1243 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 GRIPAP1Q4V328 841 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 PPP2R2DQ66LE6 453 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 ATP2B4P23634 1241 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 FOSBP53539 338 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 TYW1BQ6NUM6 668 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 ESF1Q9H501 851 aaKnown RBP3.76□□□□□ -1.81
CHD1-201ENST00000284049 SCRIBQ14160 1630 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 SERPINB4P48594 390 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 IGBP1P78318 339 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 CERKQ8TCT0 537 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 MROH2BQ7Z745 1585 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 KDM4AO75164 1064 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 QPCTQ16769 361 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 hCG_2014768A0A024R1R8 64 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 PLCG2P16885 1265 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 TAF7LQ5H9L4 462 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 C9orf131Q5VYM1 1079 aa3.76□□□□□ -1.81
CHD1-201ENST00000284049 L3MBTL3Q96JM7 780 aaPredicted RBP3.76□□□□□ -1.81
CHD1-201ENST00000284049 MAFBQ9Y5Q3 323 aaPredicted RBP3.76□□□□□ -1.81
CHD1-201ENST00000284049 CFTRP13569 1480 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 DEPDC4Q8N2C3 294 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 FAM200AQ8TCP9 573 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 PRPF38AQ8NAV1 312 aaKnown RBP3.75□□□□□ -1.81
CHD1-201ENST00000284049 HINFPQ9BQA5 517 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 H3BRB1 525 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 EAPPQ56P03 285 aaPredicted RBP3.75□□□□□ -1.81
CHD1-201ENST00000284049 RNF187Q5TA31 235 aaPredicted RBP3.75□□□□□ -1.81
CHD1-201ENST00000284049 TUT1Q9H6E5 874 aaKnown RBP3.75□□□□□ -1.81
CHD1-201ENST00000284049 ANO2Q9NQ90 1003 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 MAPK1P28482 360 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 SLFNL1Q499Z3 407 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 C3orf67Q6ZVT6 689 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 CAPN10Q9HC96 672 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 MKRN1Q9UHC7 482 aaKnown RBP3.75□□□□□ -1.81
CHD1-201ENST00000284049 TRIM35Q9UPQ4 493 aa3.75□□□□□ -1.81
CHD1-201ENST00000284049 CABLES1Q8TDN4 633 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 ZSWIM4Q9H7M6 989 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 RBM27Q9P2N5 1060 aaKnown RBP3.74□□□□□ -1.81
CHD1-201ENST00000284049 GNEQ9Y223 722 aaKnown RBP3.74□□□□□ -1.81
CHD1-201ENST00000284049 PCDHB15Q9Y5E8 787 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 SPTLC1O15269 473 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 RNF135Q8IUD6 432 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 NOVA2Q9UNW9 492 aaKnown RBP3.74□□□□□ -1.81
CHD1-201ENST00000284049 USP46P62068 366 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 CFAP70Q5T0N1 1121 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 TMEM164Q5U3C3 297 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 CDHR5Q9HBB8 845 aa3.74□□□□□ -1.81
CHD1-201ENST00000284049 PTMSP20962 102 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 CTHP32929 405 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 USP17L5A8MUK1 530 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 RNF40O75150 1001 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 MAPK8P45983 427 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 RSBN1LQ6PCB5 846 aaPredicted RBP3.73□□□□□ -1.81
CHD1-201ENST00000284049 NT5DC4Q86YG4 428 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 HIRIP3Q9BW71 556 aaPredicted RBP3.73□□□□□ -1.81
CHD1-201ENST00000284049 KIAA1522Q9P206 1035 aaPredicted RBP3.73□□□□□ -1.81
CHD1-201ENST00000284049 BOLA1Q9Y3E2 137 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 CC2D2AQ9P2K1 1620 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 TRIM50Q86XT4 487 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 SPIRE2Q8WWL2 714 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 TBC1D9Q6ZT07 1266 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 PXYLP1Q8TE99 480 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 VTI1BQ9UEU0 232 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 ATP1A2P50993 1020 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 ZNF454Q8N9F8 522 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 TMEM87AQ8NBN3 555 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 OXER1Q8TDS5 423 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 PRKAG2Q9UGJ0 569 aa3.73□□□□□ -1.81
CHD1-201ENST00000284049 CECR2Q9BXF3 1484 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 RCCD1A6NED2 376 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 SEC24BO95487 1268 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 CD44P16070 742 aaKnown RBP3.72□□□□□ -1.81
CHD1-201ENST00000284049 FGD1P98174 961 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 DPY19L2Q6NUT2 758 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 SLKQ9H2G2 1235 aaPredicted RBP3.72□□□□□ -1.81
CHD1-201ENST00000284049 R3HCC1Q9Y3T6 440 aaKnown RBP3.72□□□□□ -1.81
CHD1-201ENST00000284049 PPP1R12AO14974 1030 aaPredicted RBP3.72□□□□□ -1.81
CHD1-201ENST00000284049 CCAR1Q8IX12 1150 aaKnown RBP3.72□□□□□ -1.81
CHD1-201ENST00000284049 UNCXA6NJT0 531 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 HSP90AB2PQ58FF8 381 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 PADI6Q6TGC4 694 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 ATP9BO43861 1147 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 CERS3Q8IU89 383 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 PSMD2Q13200 908 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 ZNF211Q13398 564 aaPredicted RBP3.72□□□□□ -1.81
CHD1-201ENST00000284049 STK32AQ8WU08 396 aa3.72□□□□□ -1.81
CHD1-201ENST00000284049 PMFBP1Q8TBY8 1022 aa3.71□□□□□ -1.81
CHD1-201ENST00000284049 NDUFB5O43674 189 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 SORBS3O60504 671 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 DNAJB2P25686 324 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 FMNL1O95466 1100 aaPredicted RBP3.71□□□□□ -1.82
CHD1-201ENST00000284049 DPH6Q7L8W6 267 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 TPCN2Q8NHX9 752 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 PHF12Q96QT6 1004 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD1-201ENST00000284049 NOD1Q9Y239 953 aa3.71□□□□□ -1.82
CHD1-201ENST00000284049 ATP5J2-PTCD1G3V325 749 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms