RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 MAGI1Q96QZ7 1491 aaPredicted RBP13.86□□□□□ -0.19
USP6NL-201ENST00000277575 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
USP6NL-201ENST00000277575 SUPT6HQ7KZ85 1726 aaKnown RBP13.86□□□□□ -0.19
USP6NL-201ENST00000277575 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
USP6NL-201ENST00000277575 RIC3Q7Z5B4 369 aa13.85□□□□□ -0.19
USP6NL-201ENST00000277575 ZKSCAN1P17029 563 aaPredicted RBP13.85□□□□□ -0.19
USP6NL-201ENST00000277575 AAMPQ13685 434 aa13.85□□□□□ -0.19
USP6NL-201ENST00000277575 USP35Q9P2H5 1018 aa13.85□□□□□ -0.19
USP6NL-201ENST00000277575 SF3A1Q15459 793 aaKnown RBP13.84□□□□□ -0.19
USP6NL-201ENST00000277575 HSP90AB4PQ58FF6 505 aa13.84□□□□□ -0.19
USP6NL-201ENST00000277575 EXOSC9Q06265 439 aaKnown RBP13.84□□□□□ -0.19
USP6NL-201ENST00000277575 KIAA2012Q0VF49 1180 aa13.84□□□□□ -0.19
USP6NL-201ENST00000277575 ANKLE2Q86XL3 938 aa13.84□□□□□ -0.19
USP6NL-201ENST00000277575 RASSF8Q8NHQ8 419 aa13.84□□□□□ -0.19
USP6NL-201ENST00000277575 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.19
USP6NL-201ENST00000277575 SULT6B1Q6IMI4 303 aa13.83□□□□□ -0.2
USP6NL-201ENST00000277575 GRIN2AQ12879 1464 aa13.83□□□□□ -0.2
USP6NL-201ENST00000277575 CCDC141Q6ZP82 1450 aa13.83□□□□□ -0.2
USP6NL-201ENST00000277575 PNISRQ8TF01 805 aaKnown RBP13.83□□□□□ -0.2
USP6NL-201ENST00000277575 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
USP6NL-201ENST00000277575 MEX3CQ5U5Q3 659 aaKnown RBP13.83□□□□□ -0.2
USP6NL-201ENST00000277575 FAM184AQ8NB25 1140 aa13.83□□□□□ -0.2
USP6NL-201ENST00000277575 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
USP6NL-201ENST00000277575 UBTFL1P0CB47 393 aaPredicted RBP13.82□□□□□ -0.2
USP6NL-201ENST00000277575 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
USP6NL-201ENST00000277575 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
USP6NL-201ENST00000277575 RTEL1-TNFRSF6BF6WH68 1400 aa13.82□□□□□ -0.2
USP6NL-201ENST00000277575 H3BQV1 296 aa13.82□□□□□ -0.2
USP6NL-201ENST00000277575 IFFO2Q5TF58 517 aa13.82□□□□□ -0.2
USP6NL-201ENST00000277575 CPLX2Q6PUV4 134 aaKnown RBP13.81□□□□□ -0.2
USP6NL-201ENST00000277575 AEBP2Q6ZN18 517 aaPredicted RBP13.81□□□□□ -0.2
USP6NL-201ENST00000277575 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
USP6NL-201ENST00000277575 CCDC30Q5VVM6 783 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 TPM4P67936 248 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 ATP6V1DQ9Y5K8 247 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 APPP05067 770 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
USP6NL-201ENST00000277575 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
USP6NL-201ENST00000277575 ATAD2Q6PL18 1390 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 VPS37DQ86XT2 251 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
USP6NL-201ENST00000277575 GNAI3P08754 354 aa13.79□□□□□ -0.2
USP6NL-201ENST00000277575 TSR2Q969E8 191 aaKnown RBP13.79□□□□□ -0.2
USP6NL-201ENST00000277575 PCF11O94913 1555 aaKnown RBP13.79□□□□□ -0.2
USP6NL-201ENST00000277575 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
USP6NL-201ENST00000277575 ABCC5O15440 1437 aa13.79□□□□□ -0.2
USP6NL-201ENST00000277575 DDX11L8A8MPP1 907 aa13.79□□□□□ -0.2
USP6NL-201ENST00000277575 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
USP6NL-201ENST00000277575 DDX49Q9Y6V7 483 aaKnown RBP13.79□□□□□ -0.2
USP6NL-201ENST00000277575 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
USP6NL-201ENST00000277575 ERC2O15083 957 aa13.78□□□□□ -0.2
USP6NL-201ENST00000277575 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
USP6NL-201ENST00000277575 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
USP6NL-201ENST00000277575 NEUROD6Q96NK8 337 aa13.78□□□□□ -0.2
USP6NL-201ENST00000277575 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
USP6NL-201ENST00000277575 CUL7Q14999 1698 aa13.77□□□□□ -0.2
USP6NL-201ENST00000277575 MARCH6O60337 910 aa13.77□□□□□ -0.2
USP6NL-201ENST00000277575 PHF14O94880 888 aa13.77□□□□□ -0.2
USP6NL-201ENST00000277575 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.2
USP6NL-201ENST00000277575 TATP17735 454 aaPredicted RBP13.77□□□□□ -0.21
USP6NL-201ENST00000277575 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.21
USP6NL-201ENST00000277575 CAMSAP2Q08AD1 1489 aa13.76□□□□□ -0.21
USP6NL-201ENST00000277575 PDE3AQ14432 1141 aa13.76□□□□□ -0.21
USP6NL-201ENST00000277575 CCDC184Q52MB2 194 aa13.76□□□□□ -0.21
USP6NL-201ENST00000277575 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
USP6NL-201ENST00000277575 TRDNQ13061 729 aa13.76□□□□□ -0.21
USP6NL-201ENST00000277575 HDGFL1Q5TGJ6 251 aa13.76□□□□□ -0.21
USP6NL-201ENST00000277575 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
USP6NL-201ENST00000277575 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
USP6NL-201ENST00000277575 ZNF530Q6P9A1 599 aaPredicted RBP13.75□□□□□ -0.21
USP6NL-201ENST00000277575 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
USP6NL-201ENST00000277575 RRS1Q15050 365 aaKnown RBP13.75□□□□□ -0.21
USP6NL-201ENST00000277575 CPLX1O14810 134 aa13.75□□□□□ -0.21
USP6NL-201ENST00000277575 WDR97A6NE52 1622 aa13.75□□□□□ -0.21
USP6NL-201ENST00000277575 ADGRL1O94910 1474 aa13.75□□□□□ -0.21
USP6NL-201ENST00000277575 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
USP6NL-201ENST00000277575 BCAR3O75815 825 aa13.74□□□□□ -0.21
USP6NL-201ENST00000277575 AMOTL1Q8IY63 956 aa13.74□□□□□ -0.21
USP6NL-201ENST00000277575 SMG6Q86US8 1419 aaKnown RBP13.74□□□□□ -0.21
USP6NL-201ENST00000277575 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
USP6NL-201ENST00000277575 WAPLQ7Z5K2 1190 aa13.74□□□□□ -0.21
USP6NL-201ENST00000277575 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
USP6NL-201ENST00000277575 C22orf23Q9BZE7 217 aa13.74□□□□□ -0.21
USP6NL-201ENST00000277575 CREBRFQ8IUR6 639 aa13.73□□□□□ -0.21
USP6NL-201ENST00000277575 IDI1Q13907 227 aa13.73□□□□□ -0.21
USP6NL-201ENST00000277575 VPS53Q5VIR6 699 aa13.73□□□□□ -0.21
USP6NL-201ENST00000277575 TOM1L2Q6ZVM7 507 aa13.73□□□□□ -0.21
USP6NL-201ENST00000277575 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
USP6NL-201ENST00000277575 PRDM11Q9NQV5 511 aa13.73□□□□□ -0.21
USP6NL-201ENST00000277575 MAP3K1Q13233 1512 aa13.72□□□□□ -0.21
USP6NL-201ENST00000277575 AKNAQ7Z591 1439 aa13.72□□□□□ -0.21
USP6NL-201ENST00000277575 NOB1Q9ULX3 412 aaKnown RBP13.72□□□□□ -0.21
USP6NL-201ENST00000277575 CDC45O75419 566 aa13.72□□□□□ -0.21
USP6NL-201ENST00000277575 FCHSD2O94868 740 aa13.72□□□□□ -0.21
USP6NL-201ENST00000277575 CHMP5Q9NZZ3 219 aa13.72□□□□□ -0.21
USP6NL-201ENST00000277575 FANCIQ9NVI1 1328 aa13.71□□□□□ -0.21
USP6NL-201ENST00000277575 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-201ENST00000277575 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
USP6NL-201ENST00000277575 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms