RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 HSP90B1P14625 803 aaKnown RBP20.32■□□□□ 0.84
SCAP-201ENST00000265565 CAMSAP2Q08AD1 1489 aa20.32■□□□□ 0.84
SCAP-201ENST00000265565 CSPP1Q1MSJ5 1256 aa20.32■□□□□ 0.84
SCAP-201ENST00000265565 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
SCAP-201ENST00000265565 SYNJ2O15056 1496 aa20.31■□□□□ 0.84
SCAP-201ENST00000265565 DISP3Q9P2K9 1392 aa20.31■□□□□ 0.84
SCAP-201ENST00000265565 EIF2S2P20042 333 aaKnown RBP20.31■□□□□ 0.84
SCAP-201ENST00000265565 NEK4P51957 841 aa20.31■□□□□ 0.84
SCAP-201ENST00000265565 GPATCH3Q96I76 525 aa20.31■□□□□ 0.84
SCAP-201ENST00000265565 ESPNB1AK53 854 aa20.31■□□□□ 0.84
SCAP-201ENST00000265565 TMEM57Q8N5G2 664 aa20.31■□□□□ 0.84
SCAP-201ENST00000265565 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
SCAP-201ENST00000265565 CHD1LQ86WJ1 897 aa20.3■□□□□ 0.84
SCAP-201ENST00000265565 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
SCAP-201ENST00000265565 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
SCAP-201ENST00000265565 HTATSF1O43719 755 aaKnown RBP20.29■□□□□ 0.84
SCAP-201ENST00000265565 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
SCAP-201ENST00000265565 MPNDQ8N594 471 aa20.29■□□□□ 0.84
SCAP-201ENST00000265565 ATP6V1DQ9Y5K8 247 aa20.29■□□□□ 0.84
SCAP-201ENST00000265565 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
SCAP-201ENST00000265565 SSH1Q8WYL5 1049 aa20.28■□□□□ 0.84
SCAP-201ENST00000265565 DIAPH3Q9NSV4 1193 aa20.28■□□□□ 0.84
SCAP-201ENST00000265565 NINLQ9Y2I6 1382 aa20.28■□□□□ 0.84
SCAP-201ENST00000265565 RBM10P98175 930 aaKnown RBP20.27■□□□□ 0.84
SCAP-201ENST00000265565 GCC1Q96CN9 775 aa20.27■□□□□ 0.84
SCAP-201ENST00000265565 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
SCAP-201ENST00000265565 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.84
SCAP-201ENST00000265565 NKTRP30414 1462 aaKnown RBP20.26■□□□□ 0.83
SCAP-201ENST00000265565 ZNF330Q9Y3S2 320 aaPredicted RBP20.26■□□□□ 0.83
SCAP-201ENST00000265565 VPS37CA5D8V6 355 aaPredicted RBP20.26■□□□□ 0.83
SCAP-201ENST00000265565 C8orf34Q49A92 452 aa20.26■□□□□ 0.83
SCAP-201ENST00000265565 TSPYL4Q9UJ04 414 aa20.26■□□□□ 0.83
SCAP-201ENST00000265565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.25■□□□□ 0.83
SCAP-201ENST00000265565 TMPOP42166 694 aaKnown RBP20.25■□□□□ 0.83
SCAP-201ENST00000265565 RABEP1Q15276 862 aa20.25■□□□□ 0.83
SCAP-201ENST00000265565 DHX29Q7Z478 1369 aaKnown RBP20.25■□□□□ 0.83
SCAP-201ENST00000265565 KIAA0586Q9BVV6 1533 aa20.25■□□□□ 0.83
SCAP-201ENST00000265565 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
SCAP-201ENST00000265565 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
SCAP-201ENST00000265565 THUMPD2Q9BTF0 503 aaKnown RBP20.25■□□□□ 0.83
SCAP-201ENST00000265565 CC2D2AQ9P2K1 1620 aa20.24■□□□□ 0.83
SCAP-201ENST00000265565 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
SCAP-201ENST00000265565 NSD3Q9BZ95 1437 aa20.23■□□□□ 0.83
SCAP-201ENST00000265565 CHMP4AQ9BY43 222 aa20.23■□□□□ 0.83
SCAP-201ENST00000265565 SCAPERQ9BY12 1400 aa20.23■□□□□ 0.83
SCAP-201ENST00000265565 CABP1Q9NZU7 370 aa20.23■□□□□ 0.83
SCAP-201ENST00000265565 SMC3Q9UQE7 1217 aa20.22■□□□□ 0.83
SCAP-201ENST00000265565 PCDHB15Q9Y5E8 787 aa20.22■□□□□ 0.83
SCAP-201ENST00000265565 CT47B1P0C2W7 299 aaPredicted RBP20.22■□□□□ 0.83
SCAP-201ENST00000265565 CCDC173Q0VFZ6 552 aa20.22■□□□□ 0.83
SCAP-201ENST00000265565 HDAC5Q9UQL6 1122 aa20.21■□□□□ 0.83
SCAP-201ENST00000265565 ZNF592Q92610 1267 aa20.21■□□□□ 0.83
SCAP-201ENST00000265565 THOC2Q8NI27 1593 aaKnown RBP20.21■□□□□ 0.83
SCAP-201ENST00000265565 H3BQV1 296 aa20.2■□□□□ 0.82
SCAP-201ENST00000265565 IFFO2Q5TF58 517 aa20.2■□□□□ 0.82
SCAP-201ENST00000265565 ZKSCAN1P17029 563 aaPredicted RBP20.2■□□□□ 0.82
SCAP-201ENST00000265565 BCL11BQ9C0K0 894 aaPredicted RBP20.2■□□□□ 0.82
SCAP-201ENST00000265565 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
SCAP-201ENST00000265565 GORABQ5T7V8 394 aa20.19■□□□□ 0.82
SCAP-201ENST00000265565 CUL7Q14999 1698 aa20.19■□□□□ 0.82
SCAP-201ENST00000265565 BECN2A8MW95 431 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 GOLGA6L19H0YKK7 550 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 SF3A1Q15459 793 aaKnown RBP20.18■□□□□ 0.82
SCAP-201ENST00000265565 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 TBC1D32Q96NH3 1257 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
SCAP-201ENST00000265565 CIZ1Q9ULV3 898 aaPredicted RBP20.18■□□□□ 0.82
SCAP-201ENST00000265565 PLEKHH2Q8IVE3 1493 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 TEFQ10587 303 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 PARD3Q8TEW0 1356 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 TRIM27P14373 513 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
SCAP-201ENST00000265565 SEC24BO95487 1268 aa20.17■□□□□ 0.82
SCAP-201ENST00000265565 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
SCAP-201ENST00000265565 RUFY2Q8WXA3 655 aa20.17■□□□□ 0.82
SCAP-201ENST00000265565 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
SCAP-201ENST00000265565 ADGRF5Q8IZF2 1346 aa20.17■□□□□ 0.82
SCAP-201ENST00000265565 PER1O15534 1290 aaPredicted RBP20.17■□□□□ 0.82
SCAP-201ENST00000265565 TNNQ9UQP3 1299 aa20.17■□□□□ 0.82
SCAP-201ENST00000265565 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
SCAP-201ENST00000265565 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
SCAP-201ENST00000265565 MBD3O95983 291 aa20.16■□□□□ 0.82
SCAP-201ENST00000265565 IFIT2P09913 472 aaKnown RBP20.16■□□□□ 0.82
SCAP-201ENST00000265565 CCDC39Q9UFE4 941 aa20.16■□□□□ 0.82
SCAP-201ENST00000265565 BICD2Q8TD16 824 aa20.15■□□□□ 0.82
SCAP-201ENST00000265565 TPM2P07951 284 aa20.15■□□□□ 0.82
SCAP-201ENST00000265565 TNPO1Q92973 898 aaKnown RBP20.15■□□□□ 0.82
SCAP-201ENST00000265565 TESK2Q96S53 571 aa20.15■□□□□ 0.82
SCAP-201ENST00000265565 PLEKHH1Q9ULM0 1364 aa20.15■□□□□ 0.82
SCAP-201ENST00000265565 CCDC141Q6ZP82 1450 aa20.15■□□□□ 0.82
SCAP-201ENST00000265565 SURF6O75683 361 aaKnown RBP20.14■□□□□ 0.82
SCAP-201ENST00000265565 SULT6B1Q6IMI4 303 aa20.14■□□□□ 0.81
SCAP-201ENST00000265565 RNF123Q5XPI4 1314 aa20.14■□□□□ 0.81
SCAP-201ENST00000265565 CDK19Q9BWU1 502 aa20.14■□□□□ 0.81
SCAP-201ENST00000265565 PANK2Q9BZ23 570 aa20.14■□□□□ 0.81
SCAP-201ENST00000265565 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.81
SCAP-201ENST00000265565 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
SCAP-201ENST00000265565 FIBPO43427 364 aa20.13■□□□□ 0.81
SCAP-201ENST00000265565 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
SCAP-201ENST00000265565 UBTFL1P0CB47 393 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms