RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
NID1-201ENST00000264187 NASPP49321 788 aaPredicted RBP18.2■□□□□ 0.5
NID1-201ENST00000264187 C22orf23Q9BZE7 217 aa18.19■□□□□ 0.5
NID1-201ENST00000264187 RDXP35241 583 aaKnown RBP18.19■□□□□ 0.5
NID1-201ENST00000264187 HSP90AB3PQ58FF7 597 aa18.19■□□□□ 0.5
NID1-201ENST00000264187 RBM33Q96EV2 1170 aaKnown RBP18.19■□□□□ 0.5
NID1-201ENST00000264187 TRIM5Q9C035 493 aa18.19■□□□□ 0.5
NID1-201ENST00000264187 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
NID1-201ENST00000264187 RBM10P98175 930 aaKnown RBP18.18■□□□□ 0.5
NID1-201ENST00000264187 AXDND1Q5T1B0 1012 aaPredicted RBP18.18■□□□□ 0.5
NID1-201ENST00000264187 TMEM132AQ24JP5 1023 aa18.18■□□□□ 0.5
NID1-201ENST00000264187 API5Q9BZZ5 524 aaKnown RBP18.17■□□□□ 0.5
NID1-201ENST00000264187 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
NID1-201ENST00000264187 MPNDQ8N594 471 aa18.16■□□□□ 0.5
NID1-201ENST00000264187 NAT10Q9H0A0 1025 aaKnown RBP18.16■□□□□ 0.5
NID1-201ENST00000264187 NEFHP12036 1026 aa18.16■□□□□ 0.5
NID1-201ENST00000264187 CEBPZQ03701 1054 aaKnown RBP18.16■□□□□ 0.5
NID1-201ENST00000264187 NFKBIBQ15653 356 aa18.16■□□□□ 0.5
NID1-201ENST00000264187 STK11IPQ8N1F8 1099 aa18.16■□□□□ 0.5
NID1-201ENST00000264187 CCDC39Q9UFE4 941 aa18.16■□□□□ 0.5
NID1-201ENST00000264187 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
NID1-201ENST00000264187 CAVIN1Q6NZI2 390 aaKnown RBP18.16■□□□□ 0.5
NID1-201ENST00000264187 HMOX1P09601 288 aa18.16■□□□□ 0.5
NID1-201ENST00000264187 FAM177BA6PVY3 158 aa18.15■□□□□ 0.5
NID1-201ENST00000264187 ANKRD62A6NC57 917 aa18.15■□□□□ 0.5
NID1-201ENST00000264187 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
NID1-201ENST00000264187 RIC3Q7Z5B4 369 aa18.15■□□□□ 0.5
NID1-201ENST00000264187 BRMS1Q9HCU9 246 aa18.15■□□□□ 0.5
NID1-201ENST00000264187 SPC24Q8NBT2 197 aa18.15■□□□□ 0.5
NID1-201ENST00000264187 ERC2O15083 957 aa18.14■□□□□ 0.49
NID1-201ENST00000264187 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
NID1-201ENST00000264187 PANK1Q8TE04 598 aa18.14■□□□□ 0.49
NID1-201ENST00000264187 CWC15Q9P013 229 aaKnown RBP18.14■□□□□ 0.49
NID1-201ENST00000264187 EVC2Q86UK5 1308 aa18.13■□□□□ 0.49
NID1-201ENST00000264187 ERCC4Q92889 916 aaPredicted RBP18.12■□□□□ 0.49
NID1-201ENST00000264187 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
NID1-201ENST00000264187 VPS8Q8N3P4 1428 aa18.11■□□□□ 0.49
NID1-201ENST00000264187 MEX3CQ5U5Q3 659 aaKnown RBP18.11■□□□□ 0.49
NID1-201ENST00000264187 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
NID1-201ENST00000264187 DNAJC2Q99543 621 aaKnown RBP18.11■□□□□ 0.49
NID1-201ENST00000264187 PSME1Q06323 249 aa18.1■□□□□ 0.49
NID1-201ENST00000264187 ZBED9Q6R2W3 1325 aa18.1■□□□□ 0.49
NID1-201ENST00000264187 CARMIL2Q6F5E8 1435 aa18.1■□□□□ 0.49
NID1-201ENST00000264187 PRPF40AO75400 957 aaKnown RBP18.1■□□□□ 0.49
NID1-201ENST00000264187 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
NID1-201ENST00000264187 XBP1P17861 261 aa18.1■□□□□ 0.49
NID1-201ENST00000264187 NUTM2GQ5VZR2 741 aa18.09■□□□□ 0.49
NID1-201ENST00000264187 MRE11P49959 708 aa18.09■□□□□ 0.49
NID1-201ENST00000264187 CDK5RAP3Q96JB5 506 aa18.09■□□□□ 0.49
NID1-201ENST00000264187 MYO6Q9UM54 1294 aa18.09■□□□□ 0.49
NID1-201ENST00000264187 FANCIQ9NVI1 1328 aa18.08■□□□□ 0.49
NID1-201ENST00000264187 FIBPO43427 364 aa18.08■□□□□ 0.49
NID1-201ENST00000264187 KINO60870 393 aaKnown RBP18.08■□□□□ 0.48
NID1-201ENST00000264187 LEKR1Q6ZMV7 388 aa18.08■□□□□ 0.48
NID1-201ENST00000264187 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.08■□□□□ 0.48
NID1-201ENST00000264187 KRT18P05783 430 aaKnown RBP18.08■□□□□ 0.48
NID1-201ENST00000264187 FAM177A1Q8N128 213 aaPredicted RBP18.08■□□□□ 0.48
NID1-201ENST00000264187 MAGEC2Q9UBF1 373 aaPredicted RBP18.08■□□□□ 0.48
NID1-201ENST00000264187 TRAK2O60296 914 aa18.07■□□□□ 0.48
NID1-201ENST00000264187 CDC45O75419 566 aa18.07■□□□□ 0.48
NID1-201ENST00000264187 BRPF3Q9ULD4 1205 aa18.07■□□□□ 0.48
NID1-201ENST00000264187 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
NID1-201ENST00000264187 SYCP1Q15431 976 aa18.07■□□□□ 0.48
NID1-201ENST00000264187 HSP90AB4PQ58FF6 505 aa18.07■□□□□ 0.48
NID1-201ENST00000264187 UBTFL1P0CB47 393 aaPredicted RBP18.07■□□□□ 0.48
NID1-201ENST00000264187 CENPHQ9H3R5 247 aa18.07■□□□□ 0.48
NID1-201ENST00000264187 FILIP1LQ4L180 1135 aa18.06■□□□□ 0.48
NID1-201ENST00000264187 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
NID1-201ENST00000264187 CCDC144AA2RUR9 1427 aa18.06■□□□□ 0.48
NID1-201ENST00000264187 ENOX2Q16206 610 aaKnown RBP18.06■□□□□ 0.48
NID1-201ENST00000264187 MAPK8IP2Q13387 824 aaPredicted RBP18.05■□□□□ 0.48
NID1-201ENST00000264187 TSPY26PQ9H489 355 aa18.05■□□□□ 0.48
NID1-201ENST00000264187 NEK4P51957 841 aa18.05■□□□□ 0.48
NID1-201ENST00000264187 TAX1BP1Q86VP1 789 aa18.05■□□□□ 0.48
NID1-201ENST00000264187 CCDC66A2RUB6 948 aa18.05■□□□□ 0.48
NID1-201ENST00000264187 ZHX3Q9H4I2 956 aa18.05■□□□□ 0.48
NID1-201ENST00000264187 PSMA5P28066 241 aa18.04■□□□□ 0.48
NID1-201ENST00000264187 CCAR1Q8IX12 1150 aaKnown RBP18.04■□□□□ 0.48
NID1-201ENST00000264187 PDCL3Q9H2J4 239 aa18.04■□□□□ 0.48
NID1-201ENST00000264187 FAM193AP78312 1265 aa18.04■□□□□ 0.48
NID1-201ENST00000264187 ATP2B2Q01814 1243 aa18.03■□□□□ 0.48
NID1-201ENST00000264187 CNTROBQ8N137 903 aa18.03■□□□□ 0.48
NID1-201ENST00000264187 STK3Q13188 491 aa18.03■□□□□ 0.48
NID1-201ENST00000264187 SEPT7Q16181 437 aaKnown RBP18.03■□□□□ 0.48
NID1-201ENST00000264187 SERPINC1P01008 464 aa18.03■□□□□ 0.48
NID1-201ENST00000264187 RAPGEF4Q8WZA2 1011 aa18.03■□□□□ 0.48
NID1-201ENST00000264187 RUNDC1Q96C34 613 aa18.03■□□□□ 0.48
NID1-201ENST00000264187 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
NID1-201ENST00000264187 SURF6O75683 361 aaKnown RBP18.02■□□□□ 0.48
NID1-201ENST00000264187 SART3Q15020 963 aaKnown RBP18.02■□□□□ 0.48
NID1-201ENST00000264187 NLRP2Q9NX02 1062 aa18.02■□□□□ 0.48
NID1-201ENST00000264187 STK38Q15208 465 aa18.02■□□□□ 0.48
NID1-201ENST00000264187 USP47Q96K76 1375 aa18.02■□□□□ 0.47
NID1-201ENST00000264187 GNAI1P63096 354 aa18.01■□□□□ 0.47
NID1-201ENST00000264187 C1orf115Q9H7X2 142 aa18.01■□□□□ 0.47
NID1-201ENST00000264187 NINLQ9Y2I6 1382 aa18.01■□□□□ 0.47
NID1-201ENST00000264187 WWC2Q6AWC2 1192 aa18.01■□□□□ 0.47
NID1-201ENST00000264187 TANGO6Q9C0B7 1094 aa18.01■□□□□ 0.47
NID1-201ENST00000264187 ZRSR2Q15696 482 aaKnown RBP18■□□□□ 0.47
NID1-201ENST00000264187 GOLGA6L10A6NI86 522 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms