RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 SYAP1Q96A49 352 aaPredicted RBP19.34■□□□□ 0.69
SHANK3-201ENST00000262795 ZC3H6P61129 1189 aaKnown RBP19.34■□□□□ 0.69
SHANK3-201ENST00000262795 CPLX2Q6PUV4 134 aaKnown RBP19.34■□□□□ 0.69
SHANK3-201ENST00000262795 CSPP1Q1MSJ5 1256 aa19.33■□□□□ 0.69
SHANK3-201ENST00000262795 CCDC85AQ96PX6 553 aaPredicted RBP19.33■□□□□ 0.68
SHANK3-201ENST00000262795 NAP1L1P55209 391 aaKnown RBP19.32■□□□□ 0.68
SHANK3-201ENST00000262795 CCDC47Q96A33 483 aaKnown RBP19.32■□□□□ 0.68
SHANK3-201ENST00000262795 ST18O60284 1047 aa19.32■□□□□ 0.68
SHANK3-201ENST00000262795 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
SHANK3-201ENST00000262795 PHF14O94880 888 aa19.32■□□□□ 0.68
SHANK3-201ENST00000262795 IPO9Q96P70 1041 aaKnown RBP19.32■□□□□ 0.68
SHANK3-201ENST00000262795 EPS15P42566 896 aa19.31■□□□□ 0.68
SHANK3-201ENST00000262795 ANKLE2Q86XL3 938 aa19.31■□□□□ 0.68
SHANK3-201ENST00000262795 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
SHANK3-201ENST00000262795 C16orf71Q8IYS4 520 aaPredicted RBP19.3■□□□□ 0.68
SHANK3-201ENST00000262795 TMEM87AQ8NBN3 555 aa19.3■□□□□ 0.68
SHANK3-201ENST00000262795 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
SHANK3-201ENST00000262795 CA8P35219 290 aa19.29■□□□□ 0.68
SHANK3-201ENST00000262795 GOLGA6L1Q8N7Z2 621 aa19.29■□□□□ 0.68
SHANK3-201ENST00000262795 ATP2B1P20020 1258 aa19.29■□□□□ 0.68
SHANK3-201ENST00000262795 GOLGA6L3A6NEY3 463 aa19.28■□□□□ 0.68
SHANK3-201ENST00000262795 MATR3P43243 847 aaKnown RBP eCLIP19.28■□□□□ 0.683e-7■■■□□ 18
SHANK3-201ENST00000262795 TTC39AQ5SRH9 613 aa19.28■□□□□ 0.68
SHANK3-201ENST00000262795 THEMISQ8N1K5 641 aaPredicted RBP19.28■□□□□ 0.68
SHANK3-201ENST00000262795 BCL11BQ9C0K0 894 aaPredicted RBP19.28■□□□□ 0.68
SHANK3-201ENST00000262795 FAM161AQ3B820 660 aa19.27■□□□□ 0.68
SHANK3-201ENST00000262795 RALYLQ86SE5 291 aaKnown RBP19.27■□□□□ 0.68
SHANK3-201ENST00000262795 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
SHANK3-201ENST00000262795 CLEC11AQ9Y240 323 aa19.26■□□□□ 0.67
SHANK3-201ENST00000262795 SMG6Q86US8 1419 aaKnown RBP19.25■□□□□ 0.67
SHANK3-201ENST00000262795 PIBF1Q8WXW3 757 aa19.25■□□□□ 0.67
SHANK3-201ENST00000262795 AFAP1Q8N556 730 aa19.25■□□□□ 0.67
SHANK3-201ENST00000262795 SIL1Q9H173 461 aa19.25■□□□□ 0.67
SHANK3-201ENST00000262795 RUFY2Q8WXA3 655 aa19.24■□□□□ 0.67
SHANK3-201ENST00000262795 ARHGAP5Q13017 1502 aa19.24■□□□□ 0.67
SHANK3-201ENST00000262795 WIZO95785 1651 aa19.24■□□□□ 0.67
SHANK3-201ENST00000262795 TPM1P09493 284 aa19.24■□□□□ 0.67
SHANK3-201ENST00000262795 PLEKHO1Q53GL0 409 aaPredicted RBP19.24■□□□□ 0.67
SHANK3-201ENST00000262795 TBC1D2BQ9UPU7 963 aa19.24■□□□□ 0.67
SHANK3-201ENST00000262795 RAPGEF3O95398 923 aa19.24■□□□□ 0.67
SHANK3-201ENST00000262795 ZHX3Q9H4I2 956 aa19.23■□□□□ 0.67
SHANK3-201ENST00000262795 RAPGEF2Q9Y4G8 1499 aa19.23■□□□□ 0.67
SHANK3-201ENST00000262795 GOLGA6L19H0YKK7 550 aa19.23■□□□□ 0.67
SHANK3-201ENST00000262795 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
SHANK3-201ENST00000262795 AQRO60306 1485 aaKnown RBP eCLIP19.22■□□□□ 0.679e-7■■■■■ 27.1
SHANK3-201ENST00000262795 APAF1O14727 1248 aa19.22■□□□□ 0.67
SHANK3-201ENST00000262795 PRAM1Q96QH2 718 aa19.22■□□□□ 0.67
SHANK3-201ENST00000262795 BECN2A8MW95 431 aa19.22■□□□□ 0.67
SHANK3-201ENST00000262795 ZKSCAN1P17029 563 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-201ENST00000262795 ZPR1O75312 459 aa19.22■□□□□ 0.67
SHANK3-201ENST00000262795 MPHOSPH8Q99549 860 aa19.21■□□□□ 0.67
SHANK3-201ENST00000262795 HSP90AB2PQ58FF8 381 aa19.21■□□□□ 0.67
SHANK3-201ENST00000262795 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
SHANK3-201ENST00000262795 KRT18P05783 430 aaKnown RBP19.21■□□□□ 0.66
SHANK3-201ENST00000262795 MTHFSP49914 203 aa19.21■□□□□ 0.66
SHANK3-201ENST00000262795 UBAP1LF5GYI3 381 aa19.2■□□□□ 0.66
SHANK3-201ENST00000262795 ZKSCAN2Q63HK3 967 aa19.2■□□□□ 0.66
SHANK3-201ENST00000262795 WDHD1O75717 1129 aaPredicted RBP19.2■□□□□ 0.66
SHANK3-201ENST00000262795 SETQ01105 290 aaPredicted RBP19.2■□□□□ 0.66
SHANK3-201ENST00000262795 ZNF644Q9H582 1327 aaPredicted RBP19.19■□□□□ 0.66
SHANK3-201ENST00000262795 SAFBQ15424 915 aaKnown RBP eCLIP19.19■□□□□ 0.66
SHANK3-201ENST00000262795 CDK5RAP3Q96JB5 506 aa19.19■□□□□ 0.66
SHANK3-201ENST00000262795 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
SHANK3-201ENST00000262795 BRMS1Q9HCU9 246 aa19.19■□□□□ 0.66
SHANK3-201ENST00000262795 VPS37CA5D8V6 355 aaPredicted RBP19.19■□□□□ 0.66
SHANK3-201ENST00000262795 CCDC97Q96F63 343 aaPredicted RBP19.19■□□□□ 0.66
SHANK3-201ENST00000262795 SLC3A2P08195 630 aaKnown RBP19.18■□□□□ 0.66
SHANK3-201ENST00000262795 SCLT1Q96NL6 688 aa19.18■□□□□ 0.66
SHANK3-201ENST00000262795 GNL3LQ9NVN8 582 aaKnown RBP19.18■□□□□ 0.66
SHANK3-201ENST00000262795 BICD2Q8TD16 824 aa19.18■□□□□ 0.66
SHANK3-201ENST00000262795 ZNF592Q92610 1267 aa19.17■□□□□ 0.66
SHANK3-201ENST00000262795 PTCD1O75127 700 aaKnown RBP19.16■□□□□ 0.66
SHANK3-201ENST00000262795 RSPH6AQ9H0K4 717 aa19.16■□□□□ 0.66
SHANK3-201ENST00000262795 FSD1Q9BTV5 496 aa19.16■□□□□ 0.66
SHANK3-201ENST00000262795 SPG7Q9UQ90 795 aa19.16■□□□□ 0.66
SHANK3-201ENST00000262795 SKIDA1Q1XH10 827 aa19.16■□□□□ 0.66
SHANK3-201ENST00000262795 NLRP13Q86W25 1043 aa19.16■□□□□ 0.66
SHANK3-201ENST00000262795 ANKIB1Q9P2G1 1089 aa19.15■□□□□ 0.66
SHANK3-201ENST00000262795 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
SHANK3-201ENST00000262795 MAP4K4O95819 1239 aaPredicted RBP19.15■□□□□ 0.66
SHANK3-201ENST00000262795 ZNF622Q969S3 477 aaKnown RBP eCLIP19.15■□□□□ 0.66
SHANK3-201ENST00000262795 MPRIPQ6WCQ1 1025 aa19.15■□□□□ 0.66
SHANK3-201ENST00000262795 USP5P45974 858 aa19.15■□□□□ 0.66
SHANK3-201ENST00000262795 TTC16Q8NEE8 873 aa19.14■□□□□ 0.65
SHANK3-201ENST00000262795 ANKRD20A12PQ8NF67 263 aa19.14■□□□□ 0.65
SHANK3-201ENST00000262795 TTLL5Q6EMB2 1281 aa19.14■□□□□ 0.65
SHANK3-201ENST00000262795 RNF20Q5VTR2 975 aa19.14■□□□□ 0.65
SHANK3-201ENST00000262795 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
SHANK3-201ENST00000262795 TMOD2Q9NZR1 351 aa19.13■□□□□ 0.65
SHANK3-201ENST00000262795 ZNF771Q7L3S4 317 aaPredicted RBP19.12■□□□□ 0.65
SHANK3-201ENST00000262795 KIF15Q9NS87 1388 aa19.12■□□□□ 0.65
SHANK3-201ENST00000262795 C8orf37Q96NL8 207 aa19.12■□□□□ 0.65
SHANK3-201ENST00000262795 CEBPAP49715 358 aaPredicted RBP19.11■□□□□ 0.65
SHANK3-201ENST00000262795 FKBP4Q02790 459 aaKnown RBP eCLIP19.11■□□□□ 0.651e-6■■□□□ 13.7
SHANK3-201ENST00000262795 NUP133Q8WUM0 1156 aa19.11■□□□□ 0.65
SHANK3-201ENST00000262795 CDK19Q9BWU1 502 aa19.11■□□□□ 0.65
SHANK3-201ENST00000262795 MIA2Q96PC5 1412 aa19.11■□□□□ 0.65
SHANK3-201ENST00000262795 OFD1O75665 1012 aa19.11■□□□□ 0.65
SHANK3-201ENST00000262795 IPO7O95373 1038 aaKnown RBP19.11■□□□□ 0.65
SHANK3-201ENST00000262795 VTI1AQ96AJ9 217 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms