RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 CDK19Q9BWU1 502 aa17.33■□□□□ 0.37
HACD3-201ENST00000261875 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
HACD3-201ENST00000261875 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
HACD3-201ENST00000261875 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
HACD3-201ENST00000261875 MYOM1P52179 1685 aa17.32■□□□□ 0.36
HACD3-201ENST00000261875 NPM2Q86SE8 214 aaKnown RBP17.32■□□□□ 0.36
HACD3-201ENST00000261875 PPLO60437 1756 aa17.31■□□□□ 0.36
HACD3-201ENST00000261875 BCAR3O75815 825 aa17.3■□□□□ 0.36
HACD3-201ENST00000261875 FRAT1Q92837 279 aaPredicted RBP17.3■□□□□ 0.36
HACD3-201ENST00000261875 GLI2P10070 1586 aa17.3■□□□□ 0.36
HACD3-201ENST00000261875 QRICH2Q9H0J4 1663 aa17.29■□□□□ 0.36
HACD3-201ENST00000261875 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
HACD3-201ENST00000261875 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
HACD3-201ENST00000261875 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
HACD3-201ENST00000261875 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
HACD3-201ENST00000261875 ZRANB1Q9UGI0 708 aa17.29■□□□□ 0.36
HACD3-201ENST00000261875 IFT172Q9UG01 1749 aa17.28■□□□□ 0.36
HACD3-201ENST00000261875 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
HACD3-201ENST00000261875 DUSP27Q5VZP5 1158 aa17.27■□□□□ 0.36
HACD3-201ENST00000261875 RBM33Q96EV2 1170 aaKnown RBP17.27■□□□□ 0.36
HACD3-201ENST00000261875 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.36
HACD3-201ENST00000261875 NRXN1Q9ULB1 1477 aa17.27■□□□□ 0.35
HACD3-201ENST00000261875 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
HACD3-201ENST00000261875 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
HACD3-201ENST00000261875 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
HACD3-201ENST00000261875 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
HACD3-201ENST00000261875 ZMYM3Q14202 1370 aa17.26■□□□□ 0.35
HACD3-201ENST00000261875 CFAP53Q96M91 514 aa17.25■□□□□ 0.35
HACD3-201ENST00000261875 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
HACD3-201ENST00000261875 PREX1Q8TCU6 1659 aa17.24■□□□□ 0.35
HACD3-201ENST00000261875 RIMS2Q9UQ26 1411 aa17.24■□□□□ 0.35
HACD3-201ENST00000261875 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
HACD3-201ENST00000261875 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
HACD3-201ENST00000261875 HDGFL2Q7Z4V5 671 aaPredicted RBP17.23■□□□□ 0.35
HACD3-201ENST00000261875 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
HACD3-201ENST00000261875 HMOX1P09601 288 aa17.22■□□□□ 0.35
HACD3-201ENST00000261875 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
HACD3-201ENST00000261875 TERF2IPQ9NYB0 399 aa17.22■□□□□ 0.35
HACD3-201ENST00000261875 KIAA1210Q9ULL0 1709 aa17.22■□□□□ 0.35
HACD3-201ENST00000261875 FYB1O15117 783 aa17.22■□□□□ 0.35
HACD3-201ENST00000261875 ERICH6BQ5W0A0 696 aa17.22■□□□□ 0.35
HACD3-201ENST00000261875 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.35
HACD3-201ENST00000261875 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
HACD3-201ENST00000261875 METP08581 1390 aa17.21■□□□□ 0.35
HACD3-201ENST00000261875 NME9Q86XW9 330 aa17.21■□□□□ 0.35
HACD3-201ENST00000261875 ARHGAP31Q2M1Z3 1444 aa17.21■□□□□ 0.34
HACD3-201ENST00000261875 TNNQ9UQP3 1299 aa17.21■□□□□ 0.34
HACD3-201ENST00000261875 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
HACD3-201ENST00000261875 WWC1Q8IX03 1113 aa17.2■□□□□ 0.34
HACD3-201ENST00000261875 RRS1Q15050 365 aaKnown RBP17.19■□□□□ 0.34
HACD3-201ENST00000261875 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
HACD3-201ENST00000261875 ANKRD36BQ8N2N9 1353 aa17.19■□□□□ 0.34
HACD3-201ENST00000261875 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
HACD3-201ENST00000261875 MSH5O43196 834 aa17.19■□□□□ 0.34
HACD3-201ENST00000261875 RGS3P49796 1198 aa17.19■□□□□ 0.34
HACD3-201ENST00000261875 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
HACD3-201ENST00000261875 ZMYM4Q5VZL5 1548 aa17.18■□□□□ 0.34
HACD3-201ENST00000261875 TMEM131LA2VDJ0 1609 aa17.18■□□□□ 0.34
HACD3-201ENST00000261875 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
HACD3-201ENST00000261875 LTKP29376 864 aa17.17■□□□□ 0.34
HACD3-201ENST00000261875 PMFBP1Q8TBY8 1022 aa17.17■□□□□ 0.34
HACD3-201ENST00000261875 ARHGEF28Q8N1W1 1705 aaKnown RBP17.17■□□□□ 0.34
HACD3-201ENST00000261875 COG6Q9Y2V7 657 aa17.17■□□□□ 0.34
HACD3-201ENST00000261875 A2ML1A8K2U0 1454 aa17.17■□□□□ 0.34
HACD3-201ENST00000261875 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
HACD3-201ENST00000261875 SETBP1Q9Y6X0 1596 aa17.16■□□□□ 0.34
HACD3-201ENST00000261875 THUMPD2Q9BTF0 503 aaKnown RBP17.16■□□□□ 0.34
HACD3-201ENST00000261875 TCERG1O14776 1098 aaKnown RBP17.15■□□□□ 0.34
HACD3-201ENST00000261875 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
HACD3-201ENST00000261875 ALKQ9UM73 1620 aa17.15■□□□□ 0.34
HACD3-201ENST00000261875 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
HACD3-201ENST00000261875 TNRQ92752 1358 aa17.15■□□□□ 0.34
HACD3-201ENST00000261875 PTPRMP28827 1452 aa17.14■□□□□ 0.33
HACD3-201ENST00000261875 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.33
HACD3-201ENST00000261875 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
HACD3-201ENST00000261875 NPC1L1Q9UHC9 1359 aa17.13■□□□□ 0.33
HACD3-201ENST00000261875 ZNF521Q96K83 1311 aa17.13■□□□□ 0.33
HACD3-201ENST00000261875 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
HACD3-201ENST00000261875 E9PSI1 815 aa17.13■□□□□ 0.33
HACD3-201ENST00000261875 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
HACD3-201ENST00000261875 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
HACD3-201ENST00000261875 ATAD2Q6PL18 1390 aa17.11■□□□□ 0.33
HACD3-201ENST00000261875 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
HACD3-201ENST00000261875 POLR3AO14802 1390 aaPredicted RBP17.11■□□□□ 0.33
HACD3-201ENST00000261875 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
HACD3-201ENST00000261875 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
HACD3-201ENST00000261875 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
HACD3-201ENST00000261875 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.09■□□□□ 0.33
HACD3-201ENST00000261875 MYO3AQ8NEV4 1616 aa17.09■□□□□ 0.33
HACD3-201ENST00000261875 PRKAR2BP31323 418 aa17.09■□□□□ 0.33
HACD3-201ENST00000261875 RIPK4P57078 832 aa17.09■□□□□ 0.33
HACD3-201ENST00000261875 PPIP5K1Q6PFW1 1433 aa17.07■□□□□ 0.32
HACD3-201ENST00000261875 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
HACD3-201ENST00000261875 ABCC11Q96J66 1382 aa17.07■□□□□ 0.32
HACD3-201ENST00000261875 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
HACD3-201ENST00000261875 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
HACD3-201ENST00000261875 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
HACD3-201ENST00000261875 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
HACD3-201ENST00000261875 PRR36Q9H6K5 1346 aa17.05■□□□□ 0.32
HACD3-201ENST00000261875 ARHGEF40Q8TER5 1519 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms