RNA–Protein interactions for RNA: ENST00000229866.10

RNF8-201, Transcript of ring finger protein 8, humanhuman

TSL 2

Gene RNF8, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-201ENST00000229866 TRMT2AQ8IZ69 625 aaKnown RBP28.32■■■□□ 2.12
RNF8-201ENST00000229866 CRBNQ96SW2 442 aa28.31■■■□□ 2.12
RNF8-201ENST00000229866 CGNL1Q0VF96 1302 aa28.31■■■□□ 2.12
RNF8-201ENST00000229866 KIF13AQ9H1H9 1805 aa28.31■■■□□ 2.12
RNF8-201ENST00000229866 APAF1O14727 1248 aa28.3■■■□□ 2.12
RNF8-201ENST00000229866 NSD2O96028 1365 aa28.29■■■□□ 2.12
RNF8-201ENST00000229866 ANKRD36BQ8N2N9 1353 aa28.28■■■□□ 2.12
RNF8-201ENST00000229866 TMEM131LA2VDJ0 1609 aa28.28■■■□□ 2.12
RNF8-201ENST00000229866 E9PSI1 815 aa28.28■■■□□ 2.12
RNF8-201ENST00000229866 TULP4Q9NRJ4 1543 aa28.28■■■□□ 2.12
RNF8-201ENST00000229866 NINLQ9Y2I6 1382 aa28.27■■■□□ 2.12
RNF8-201ENST00000229866 NUTM2DQ5VT03 806 aaPredicted RBP28.26■■■□□ 2.11
RNF8-201ENST00000229866 NKTRP30414 1462 aaKnown RBP28.26■■■□□ 2.11
RNF8-201ENST00000229866 MS4A1P11836 297 aa28.25■■■□□ 2.11
RNF8-201ENST00000229866 PPP6R1Q9UPN7 881 aa28.25■■■□□ 2.11
RNF8-201ENST00000229866 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
RNF8-201ENST00000229866 TRHP20396 242 aaPredicted RBP28.24■■■□□ 2.11
RNF8-201ENST00000229866 CFAP53Q96M91 514 aa28.23■■■□□ 2.11
RNF8-201ENST00000229866 ANP32AP39687 249 aaKnown RBP28.21■■■□□ 2.11
RNF8-201ENST00000229866 SHPRHQ149N8 1683 aa28.21■■■□□ 2.11
RNF8-201ENST00000229866 AGLP35573 1532 aa28.21■■■□□ 2.11
RNF8-201ENST00000229866 TSPOAP1O95153 1857 aa28.2■■■□□ 2.11
RNF8-201ENST00000229866 MYO5BQ9ULV0 1848 aa28.19■■■□□ 2.1
RNF8-201ENST00000229866 RUNDC1Q96C34 613 aa28.18■■■□□ 2.1
RNF8-201ENST00000229866 C20orf194Q5TEA3 1177 aa28.16■■■□□ 2.1
RNF8-201ENST00000229866 ATAD2Q6PL18 1390 aa28.15■■■□□ 2.1
RNF8-201ENST00000229866 TNNT2P45379 298 aaPredicted RBP28.15■■■□□ 2.1
RNF8-201ENST00000229866 CABP2Q9NPB3 220 aa28.15■■■□□ 2.1
RNF8-201ENST00000229866 PTPRMP28827 1452 aa28.14■■■□□ 2.1
RNF8-201ENST00000229866 MTHFSP49914 203 aa28.13■■■□□ 2.09
RNF8-201ENST00000229866 NCBP3Q53F19 620 aaKnown RBP28.13■■■□□ 2.09
RNF8-201ENST00000229866 WWC1Q8IX03 1113 aa28.13■■■□□ 2.09
RNF8-201ENST00000229866 SPINK5Q9NQ38 1064 aaPredicted RBP28.13■■■□□ 2.09
RNF8-201ENST00000229866 YTHDC2Q9H6S0 1430 aaKnown RBP28.13■■■□□ 2.09
RNF8-201ENST00000229866 STK26Q9P289 416 aa28.12■■■□□ 2.09
RNF8-201ENST00000229866 CENPQQ7L2Z9 268 aaPredicted RBP28.12■■■□□ 2.09
RNF8-201ENST00000229866 NOP58Q9Y2X3 529 aaKnown RBP28.11■■■□□ 2.09
RNF8-201ENST00000229866 ABCC11Q96J66 1382 aa28.11■■■□□ 2.09
RNF8-201ENST00000229866 CLTCQ00610 1675 aaKnown RBP28.11■■■□□ 2.09
RNF8-201ENST00000229866 IQSEC2Q5JU85 1478 aa28.11■■■□□ 2.09
RNF8-201ENST00000229866 SRPK2P78362 688 aaKnown RBP28.1■■■□□ 2.09
RNF8-201ENST00000229866 FBXO31Q5XUX0 539 aaPredicted RBP28.1■■■□□ 2.09
RNF8-201ENST00000229866 STAG3Q9UJ98 1225 aa28.1■■■□□ 2.09
RNF8-201ENST00000229866 IPO9Q96P70 1041 aaKnown RBP28.09■■■□□ 2.09
RNF8-201ENST00000229866 POGKQ9P215 609 aa28.09■■■□□ 2.09
RNF8-201ENST00000229866 ALKQ9UM73 1620 aa28.09■■■□□ 2.09
RNF8-201ENST00000229866 KDM2BQ8NHM5 1336 aa28.09■■■□□ 2.09
RNF8-201ENST00000229866 PDE4AP27815 886 aa28.09■■■□□ 2.09
RNF8-201ENST00000229866 TERF2IPQ9NYB0 399 aa28.09■■■□□ 2.09
RNF8-201ENST00000229866 SAFB2Q14151 953 aaKnown RBP eCLIP28.08■■■□□ 2.09
RNF8-201ENST00000229866 WDR63Q8IWG1 891 aa28.07■■■□□ 2.08
RNF8-201ENST00000229866 A0A1W2PP64 1363 aa28.07■■■□□ 2.08
RNF8-201ENST00000229866 CCDC27Q2M243 656 aa28.07■■■□□ 2.08
RNF8-201ENST00000229866 PRAM1Q96QH2 718 aa28.06■■■□□ 2.08
RNF8-201ENST00000229866 BACH2Q9BYV9 841 aa28.06■■■□□ 2.08
RNF8-201ENST00000229866 TCP11L2Q8N4U5 519 aa28.06■■■□□ 2.08
RNF8-201ENST00000229866 PHF23Q9BUL5 403 aaPredicted RBP28.06■■■□□ 2.08
RNF8-201ENST00000229866 MED14O60244 1454 aa28.05■■■□□ 2.08
RNF8-201ENST00000229866 SPATA31D1Q6ZQQ2 1576 aa28.05■■■□□ 2.08
RNF8-201ENST00000229866 DMRT2Q9Y5R5 561 aa28.04■■■□□ 2.08
RNF8-201ENST00000229866 PDE3AQ14432 1141 aa28.02■■■□□ 2.08
RNF8-201ENST00000229866 MINK1Q8N4C8 1332 aaPredicted RBP28.02■■■□□ 2.08
RNF8-201ENST00000229866 DLC1Q96QB1 1528 aa28.01■■■□□ 2.07
RNF8-201ENST00000229866 BCAR3O75815 825 aa28■■■□□ 2.07
RNF8-201ENST00000229866 ANKRD26Q9UPS8 1709 aa28■■■□□ 2.07
RNF8-201ENST00000229866 A2ML1A8K2U0 1454 aa28■■■□□ 2.07
RNF8-201ENST00000229866 HDGFL2Q7Z4V5 671 aaPredicted RBP28■■■□□ 2.07
RNF8-201ENST00000229866 ZBTB47Q9UFB7 747 aaPredicted RBP27.98■■■□□ 2.07
RNF8-201ENST00000229866 U2AF1L5P0DN76 240 aaPredicted RBP27.97■■■□□ 2.07
RNF8-201ENST00000229866 U2AF1Q01081 240 aaKnown RBP eCLIP27.97■■■□□ 2.07
RNF8-201ENST00000229866 ARHGEF40Q8TER5 1519 aa27.97■■■□□ 2.07
RNF8-201ENST00000229866 NEUROD2Q15784 382 aa27.97■■■□□ 2.07
RNF8-201ENST00000229866 RIMS2Q9UQ26 1411 aa27.96■■■□□ 2.07
RNF8-201ENST00000229866 CD163L1Q9NR16 1453 aa27.95■■■□□ 2.07
RNF8-201ENST00000229866 RRP7AQ9Y3A4 280 aaKnown RBP27.95■■■□□ 2.07
RNF8-201ENST00000229866 ADGRB2O60241 1585 aa27.95■■■□□ 2.07
RNF8-201ENST00000229866 CDK19Q9BWU1 502 aa27.95■■■□□ 2.06
RNF8-201ENST00000229866 CANXP27824 592 aaKnown RBP27.94■■■□□ 2.06
RNF8-201ENST00000229866 MYH16Q9H6N6 1097 aa27.94■■■□□ 2.06
RNF8-201ENST00000229866 SENP3Q9H4L4 574 aaPredicted RBP27.93■■■□□ 2.06
RNF8-201ENST00000229866 FYB1O15117 783 aa27.92■■■□□ 2.06
RNF8-201ENST00000229866 AAMPQ13685 434 aa27.92■■■□□ 2.06
RNF8-201ENST00000229866 GGNBP2Q9H3C7 697 aa27.92■■■□□ 2.06
RNF8-201ENST00000229866 NLRP1Q9C000 1473 aa27.91■■■□□ 2.06
RNF8-201ENST00000229866 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.91■■■□□ 2.06
RNF8-201ENST00000229866 COL3A1P02461 1466 aaPredicted RBP27.9■■■□□ 2.06
RNF8-201ENST00000229866 RARSP54136 660 aaKnown RBP27.89■■■□□ 2.05
RNF8-201ENST00000229866 PAK3O75914 559 aaPredicted RBP27.88■■■□□ 2.05
RNF8-201ENST00000229866 PNNQ9H307 717 aaKnown RBP27.88■■■□□ 2.05
RNF8-201ENST00000229866 SETD1AO15047 1707 aaKnown RBP27.88■■■□□ 2.05
RNF8-201ENST00000229866 ATP7BP35670 1465 aa27.87■■■□□ 2.05
RNF8-201ENST00000229866 NPM2Q86SE8 214 aaKnown RBP27.87■■■□□ 2.05
RNF8-201ENST00000229866 KIF20BQ96Q89 1820 aa27.86■■■□□ 2.05
RNF8-201ENST00000229866 CT47B1P0C2W7 299 aaPredicted RBP27.86■■■□□ 2.05
RNF8-201ENST00000229866 ESF1Q9H501 851 aaKnown RBP27.86■■■□□ 2.05
RNF8-201ENST00000229866 CABP1Q9NZU7 370 aa27.85■■■□□ 2.05
RNF8-201ENST00000229866 U2SURPO15042 1029 aaKnown RBP27.84■■■□□ 2.05
RNF8-201ENST00000229866 HDGFP51858 240 aaKnown RBP27.84■■■□□ 2.05
RNF8-201ENST00000229866 MLECQ14165 292 aa27.84■■■□□ 2.05
RNF8-201ENST00000229866 MAPK8IP3Q9UPT6 1336 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms