RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
COL1A1-201ENST00000225964 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
COL1A1-201ENST00000225964 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
COL1A1-201ENST00000225964 ZFYVE27Q5T4F4 411 aa16.05■□□□□ 0.16
COL1A1-201ENST00000225964 CADPSQ9ULU8 1353 aa16.04■□□□□ 0.16
COL1A1-201ENST00000225964 WASHC2AQ641Q2 1341 aa16.04■□□□□ 0.16
COL1A1-201ENST00000225964 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
COL1A1-201ENST00000225964 SF3B2Q13435 895 aaKnown RBP16.03■□□□□ 0.16
COL1A1-201ENST00000225964 SASS6Q6UVJ0 657 aa16.03■□□□□ 0.16
COL1A1-201ENST00000225964 HSP90AB4PQ58FF6 505 aa16.03■□□□□ 0.16
COL1A1-201ENST00000225964 WWC2Q6AWC2 1192 aa16.02■□□□□ 0.16
COL1A1-201ENST00000225964 DHX57Q6P158 1386 aaKnown RBP16.02■□□□□ 0.16
COL1A1-201ENST00000225964 INTS3Q68E01 1043 aaKnown RBP16.02■□□□□ 0.16
COL1A1-201ENST00000225964 RUNDC1Q96C34 613 aa16.02■□□□□ 0.16
COL1A1-201ENST00000225964 MIA2Q96PC5 1412 aa16.02■□□□□ 0.15
COL1A1-201ENST00000225964 PDE4AP27815 886 aa16.02■□□□□ 0.15
COL1A1-201ENST00000225964 STRN4Q9NRL3 753 aa16.02■□□□□ 0.15
COL1A1-201ENST00000225964 HSP90AB2PQ58FF8 381 aa16.01■□□□□ 0.15
COL1A1-201ENST00000225964 CABP2Q9NPB3 220 aa16.01■□□□□ 0.15
COL1A1-201ENST00000225964 GNAI1P63096 354 aa16.01■□□□□ 0.15
COL1A1-201ENST00000225964 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
COL1A1-201ENST00000225964 XBP1P17861 261 aa16■□□□□ 0.15
COL1A1-201ENST00000225964 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
COL1A1-201ENST00000225964 UBTFL1P0CB47 393 aaPredicted RBP16■□□□□ 0.15
COL1A1-201ENST00000225964 NUTM2BA6NNL0 878 aaPredicted RBP15.99■□□□□ 0.15
COL1A1-201ENST00000225964 NUTM2EB1AL46 878 aaPredicted RBP15.99■□□□□ 0.15
COL1A1-201ENST00000225964 NUTM2AQ8IVF1 878 aaPredicted RBP15.99■□□□□ 0.15
COL1A1-201ENST00000225964 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
COL1A1-201ENST00000225964 NLRP6P59044 892 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 RUFY1Q96T51 708 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 DNAJC2Q99543 621 aaKnown RBP15.98■□□□□ 0.15
COL1A1-201ENST00000225964 CCDC73Q6ZRK6 1079 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 TBC1D2BQ9UPU7 963 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 GPRASP1Q5JY77 1395 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 ABTB2Q8N961 1025 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
COL1A1-201ENST00000225964 PAF1Q8N7H5 531 aa15.97■□□□□ 0.15
COL1A1-201ENST00000225964 PDILTQ8N807 584 aa15.96■□□□□ 0.15
COL1A1-201ENST00000225964 FSD1Q9BTV5 496 aa15.96■□□□□ 0.15
COL1A1-201ENST00000225964 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
COL1A1-201ENST00000225964 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
COL1A1-201ENST00000225964 SMG6Q86US8 1419 aaKnown RBP15.96■□□□□ 0.15
COL1A1-201ENST00000225964 OFD1O75665 1012 aa15.96■□□□□ 0.14
COL1A1-201ENST00000225964 ATP2B2Q01814 1243 aa15.96■□□□□ 0.14
COL1A1-201ENST00000225964 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.14
COL1A1-201ENST00000225964 RRP12Q5JTH9 1297 aaKnown RBP15.95■□□□□ 0.14
COL1A1-201ENST00000225964 TTC39AQ5SRH9 613 aa15.95■□□□□ 0.14
COL1A1-201ENST00000225964 CDK5RAP3Q96JB5 506 aa15.95■□□□□ 0.14
COL1A1-201ENST00000225964 SLC3A2P08195 630 aaKnown RBP15.95■□□□□ 0.14
COL1A1-201ENST00000225964 ZNF771Q7L3S4 317 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-201ENST00000225964 AK7Q96M32 723 aa15.95■□□□□ 0.14
COL1A1-201ENST00000225964 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
COL1A1-201ENST00000225964 SART3Q15020 963 aaKnown RBP15.94■□□□□ 0.14
COL1A1-201ENST00000225964 CNNM1Q9NRU3 951 aa15.94■□□□□ 0.14
COL1A1-201ENST00000225964 STK11IPQ8N1F8 1099 aa15.93■□□□□ 0.14
COL1A1-201ENST00000225964 TMEM132EQ6IEE7 984 aa15.93■□□□□ 0.14
COL1A1-201ENST00000225964 PROSER2Q86WR7 435 aaPredicted RBP15.93■□□□□ 0.14
COL1A1-201ENST00000225964 PSMA5P28066 241 aa15.92■□□□□ 0.14
COL1A1-201ENST00000225964 PRKRIP1Q9H875 184 aaPredicted RBP15.92■□□□□ 0.14
COL1A1-201ENST00000225964 TTLL5Q6EMB2 1281 aa15.92■□□□□ 0.14
COL1A1-201ENST00000225964 ARHGAP5Q13017 1502 aa15.92■□□□□ 0.14
COL1A1-201ENST00000225964 CCDC30Q5VVM6 783 aa15.92■□□□□ 0.14
COL1A1-201ENST00000225964 CAGE1Q8TC20 777 aa15.92■□□□□ 0.14
COL1A1-201ENST00000225964 PLEKHO1Q53GL0 409 aaPredicted RBP15.91■□□□□ 0.14
COL1A1-201ENST00000225964 CDR1P51861 262 aa15.91■□□□□ 0.14
COL1A1-201ENST00000225964 RBM5P52756 815 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL1A1-201ENST00000225964 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
COL1A1-201ENST00000225964 TEX35Q5T0J7 233 aa15.91■□□□□ 0.14
COL1A1-201ENST00000225964 KRT18P05783 430 aaKnown RBP15.91■□□□□ 0.14
COL1A1-201ENST00000225964 ZBED9Q6R2W3 1325 aa15.91■□□□□ 0.14
COL1A1-201ENST00000225964 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
COL1A1-201ENST00000225964 HSP90AA2PQ14568 343 aaPredicted RBP15.9■□□□□ 0.14
COL1A1-201ENST00000225964 IFT57Q9NWB7 429 aa15.9■□□□□ 0.14
COL1A1-201ENST00000225964 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
COL1A1-201ENST00000225964 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
COL1A1-201ENST00000225964 NAT10Q9H0A0 1025 aaKnown RBP15.89■□□□□ 0.13
COL1A1-201ENST00000225964 TATP17735 454 aaPredicted RBP15.89■□□□□ 0.13
COL1A1-201ENST00000225964 MNS1Q8NEH6 495 aa15.89■□□□□ 0.13
COL1A1-201ENST00000225964 CABP4P57796 275 aa15.89■□□□□ 0.13
COL1A1-201ENST00000225964 SKIDA1Q1XH10 827 aa15.89■□□□□ 0.13
COL1A1-201ENST00000225964 GNL3LQ9NVN8 582 aaKnown RBP15.89■□□□□ 0.13
COL1A1-201ENST00000225964 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.13
COL1A1-201ENST00000225964 DDX54Q8TDD1 881 aaKnown RBP15.88■□□□□ 0.13
COL1A1-201ENST00000225964 GSE1Q14687 1217 aa15.88■□□□□ 0.13
COL1A1-201ENST00000225964 SYCP1Q15431 976 aa15.88■□□□□ 0.13
COL1A1-201ENST00000225964 GAS2L2Q8NHY3 880 aa15.88■□□□□ 0.13
COL1A1-201ENST00000225964 RDXP35241 583 aaKnown RBP15.88■□□□□ 0.13
COL1A1-201ENST00000225964 CHMP5Q9NZZ3 219 aa15.88■□□□□ 0.13
COL1A1-201ENST00000225964 MAGEC2Q9UBF1 373 aaPredicted RBP15.88■□□□□ 0.13
COL1A1-201ENST00000225964 NUCB2P80303 420 aa15.88■□□□□ 0.13
COL1A1-201ENST00000225964 TXNDC2Q86VQ3 553 aa15.88■□□□□ 0.13
COL1A1-201ENST00000225964 PANK1Q8TE04 598 aa15.88■□□□□ 0.13
COL1A1-201ENST00000225964 CDC45O75419 566 aa15.87■□□□□ 0.13
COL1A1-201ENST00000225964 CCDC158Q5M9N0 1113 aa15.87■□□□□ 0.13
COL1A1-201ENST00000225964 TOM1L2Q6ZVM7 507 aa15.87■□□□□ 0.13
COL1A1-201ENST00000225964 SURF6O75683 361 aaKnown RBP15.87■□□□□ 0.13
COL1A1-201ENST00000225964 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
COL1A1-201ENST00000225964 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
COL1A1-201ENST00000225964 TXLNAP40222 546 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms