RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 ZFYVE9O95405 1425 aa19.99■□□□□ 0.79
TGFB1-201ENST00000221930 SLFN5Q08AF3 891 aa19.99■□□□□ 0.79
TGFB1-201ENST00000221930 NPC1L1Q9UHC9 1359 aa19.99■□□□□ 0.79
TGFB1-201ENST00000221930 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
TGFB1-201ENST00000221930 YEATS2Q9ULM3 1422 aa19.98■□□□□ 0.79
TGFB1-201ENST00000221930 GGT6Q6P531 493 aa19.97■□□□□ 0.79
TGFB1-201ENST00000221930 ARHGEF40Q8TER5 1519 aa19.97■□□□□ 0.79
TGFB1-201ENST00000221930 RAPGEF3O95398 923 aa19.96■□□□□ 0.79
TGFB1-201ENST00000221930 TNNT2P45379 298 aaPredicted RBP19.96■□□□□ 0.79
TGFB1-201ENST00000221930 IL27Q8NEV9 243 aa19.95■□□□□ 0.78
TGFB1-201ENST00000221930 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
TGFB1-201ENST00000221930 CFAP65Q6ZU64 1925 aaKnown RBP19.95■□□□□ 0.78
TGFB1-201ENST00000221930 FAM69CQ0P6D2 419 aa19.95■□□□□ 0.78
TGFB1-201ENST00000221930 NEXMIFQ5QGS0 1516 aa19.94■□□□□ 0.78
TGFB1-201ENST00000221930 TMEM132EQ6IEE7 984 aa19.94■□□□□ 0.78
TGFB1-201ENST00000221930 TSPOAP1O95153 1857 aa19.94■□□□□ 0.78
TGFB1-201ENST00000221930 KDM2BQ8NHM5 1336 aa19.93■□□□□ 0.78
TGFB1-201ENST00000221930 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
TGFB1-201ENST00000221930 BCAR3O75815 825 aa19.93■□□□□ 0.78
TGFB1-201ENST00000221930 SLC52A1Q9NWF4 448 aa19.93■□□□□ 0.78
TGFB1-201ENST00000221930 TRMT2AQ8IZ69 625 aaKnown RBP19.92■□□□□ 0.78
TGFB1-201ENST00000221930 SLC12A5Q9H2X9 1139 aa19.92■□□□□ 0.78
TGFB1-201ENST00000221930 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
TGFB1-201ENST00000221930 NUTM2DQ5VT03 806 aaPredicted RBP19.91■□□□□ 0.78
TGFB1-201ENST00000221930 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.91■□□□□ 0.78
TGFB1-201ENST00000221930 TMEM131LA2VDJ0 1609 aa19.91■□□□□ 0.78
TGFB1-201ENST00000221930 CENPQQ7L2Z9 268 aaPredicted RBP19.89■□□□□ 0.77
TGFB1-201ENST00000221930 NEUROD2Q15784 382 aa19.89■□□□□ 0.77
TGFB1-201ENST00000221930 SENP3Q9H4L4 574 aaPredicted RBP19.88■□□□□ 0.77
TGFB1-201ENST00000221930 LAS1LQ9Y4W2 734 aaKnown RBP19.88■□□□□ 0.77
TGFB1-201ENST00000221930 SPATA31D1Q6ZQQ2 1576 aa19.88■□□□□ 0.77
TGFB1-201ENST00000221930 NKTRP30414 1462 aaKnown RBP19.87■□□□□ 0.77
TGFB1-201ENST00000221930 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
TGFB1-201ENST00000221930 NSD3Q9BZ95 1437 aa19.87■□□□□ 0.77
TGFB1-201ENST00000221930 E9PSI1 815 aa19.87■□□□□ 0.77
TGFB1-201ENST00000221930 C14orf93Q9H972 538 aaKnown RBP19.86■□□□□ 0.77
TGFB1-201ENST00000221930 RTL5Q5HYW3 569 aaPredicted RBP19.86■□□□□ 0.77
TGFB1-201ENST00000221930 RRP7AQ9Y3A4 280 aaKnown RBP19.85■□□□□ 0.77
TGFB1-201ENST00000221930 PUS7Q96PZ0 661 aaKnown RBP19.85■□□□□ 0.77
TGFB1-201ENST00000221930 QRICH2Q9H0J4 1663 aa19.85■□□□□ 0.77
TGFB1-201ENST00000221930 RGS3P49796 1198 aa19.84■□□□□ 0.77
TGFB1-201ENST00000221930 WWC1Q8IX03 1113 aa19.84■□□□□ 0.77
TGFB1-201ENST00000221930 PLEKHG5O94827 1062 aa19.83■□□□□ 0.77
TGFB1-201ENST00000221930 VGFO15240 615 aaPredicted RBP19.83■□□□□ 0.77
TGFB1-201ENST00000221930 ARHGEF28Q8N1W1 1705 aaKnown RBP19.83■□□□□ 0.76
TGFB1-201ENST00000221930 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
TGFB1-201ENST00000221930 RTN4Q9NQC3 1192 aaKnown RBP19.82■□□□□ 0.76
TGFB1-201ENST00000221930 PODXL2Q9NZ53 605 aa19.82■□□□□ 0.76
TGFB1-201ENST00000221930 POLR3AO14802 1390 aaPredicted RBP19.82■□□□□ 0.76
TGFB1-201ENST00000221930 USP32Q8NFA0 1604 aa19.81■□□□□ 0.76
TGFB1-201ENST00000221930 MYO5BQ9ULV0 1848 aa19.81■□□□□ 0.76
TGFB1-201ENST00000221930 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
TGFB1-201ENST00000221930 MTHFSP49914 203 aa19.79■□□□□ 0.76
TGFB1-201ENST00000221930 SLC4A3P48751 1232 aa19.78■□□□□ 0.76
TGFB1-201ENST00000221930 CANXP27824 592 aaKnown RBP19.78■□□□□ 0.76
TGFB1-201ENST00000221930 C8orf34Q49A92 452 aa19.78■□□□□ 0.76
TGFB1-201ENST00000221930 TCP11L2Q8N4U5 519 aa19.78■□□□□ 0.76
TGFB1-201ENST00000221930 PANK1Q8TE04 598 aa19.78■□□□□ 0.76
TGFB1-201ENST00000221930 IGHDP01880 384 aa19.77■□□□□ 0.75
TGFB1-201ENST00000221930 NEFMP07197 916 aa19.77■□□□□ 0.75
TGFB1-201ENST00000221930 FAM161AQ3B820 660 aa19.77■□□□□ 0.75
TGFB1-201ENST00000221930 FRAT1Q92837 279 aaPredicted RBP19.77■□□□□ 0.75
TGFB1-201ENST00000221930 COG6Q9Y2V7 657 aa19.76■□□□□ 0.75
TGFB1-201ENST00000221930 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
TGFB1-201ENST00000221930 RUNDC1Q96C34 613 aa19.75■□□□□ 0.75
TGFB1-201ENST00000221930 CABP2Q9NPB3 220 aa19.75■□□□□ 0.75
TGFB1-201ENST00000221930 CGNL1Q0VF96 1302 aa19.75■□□□□ 0.75
TGFB1-201ENST00000221930 DDRGK1Q96HY6 314 aa19.73■□□□□ 0.75
TGFB1-201ENST00000221930 BCL2L13Q9BXK5 485 aa19.72■□□□□ 0.75
TGFB1-201ENST00000221930 STK26Q9P289 416 aa19.72■□□□□ 0.75
TGFB1-201ENST00000221930 IDI1Q13907 227 aa19.72■□□□□ 0.75
TGFB1-201ENST00000221930 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
TGFB1-201ENST00000221930 EVC2Q86UK5 1308 aa19.71■□□□□ 0.75
TGFB1-201ENST00000221930 PDE3AQ14432 1141 aa19.71■□□□□ 0.75
TGFB1-201ENST00000221930 NINLQ9Y2I6 1382 aa19.71■□□□□ 0.75
TGFB1-201ENST00000221930 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
TGFB1-201ENST00000221930 TNNQ9UQP3 1299 aa19.7■□□□□ 0.74
TGFB1-201ENST00000221930 RARSP54136 660 aaKnown RBP19.69■□□□□ 0.74
TGFB1-201ENST00000221930 CLUAP1Q96AJ1 413 aa19.69■□□□□ 0.74
TGFB1-201ENST00000221930 CFAP53Q96M91 514 aa19.69■□□□□ 0.74
TGFB1-201ENST00000221930 U2AF1L5P0DN76 240 aaPredicted RBP19.69■□□□□ 0.74
TGFB1-201ENST00000221930 U2AF1Q01081 240 aaKnown RBP eCLIP19.69■□□□□ 0.74
TGFB1-201ENST00000221930 SETD1AO15047 1707 aaKnown RBP19.68■□□□□ 0.74
TGFB1-201ENST00000221930 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
TGFB1-201ENST00000221930 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
TGFB1-201ENST00000221930 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
TGFB1-201ENST00000221930 ALKQ9UM73 1620 aa19.66■□□□□ 0.74
TGFB1-201ENST00000221930 PPM1GO15355 546 aaPredicted RBP19.66■□□□□ 0.74
TGFB1-201ENST00000221930 RLBP1P12271 317 aa19.66■□□□□ 0.74
TGFB1-201ENST00000221930 ANKRD36BQ8N2N9 1353 aa19.66■□□□□ 0.74
TGFB1-201ENST00000221930 SRPK2P78362 688 aaKnown RBP19.66■□□□□ 0.74
TGFB1-201ENST00000221930 IQSEC2Q5JU85 1478 aa19.65■□□□□ 0.74
TGFB1-201ENST00000221930 KNDC1Q76NI1 1749 aa19.64■□□□□ 0.73
TGFB1-201ENST00000221930 WDR63Q8IWG1 891 aa19.64■□□□□ 0.73
TGFB1-201ENST00000221930 GGNBP2Q9H3C7 697 aa19.64■□□□□ 0.73
TGFB1-201ENST00000221930 GLIPR1L2Q4G1C9 344 aa19.64■□□□□ 0.73
TGFB1-201ENST00000221930 PTPRMP28827 1452 aa19.63■□□□□ 0.73
TGFB1-201ENST00000221930 USP35Q9P2H5 1018 aa19.62■□□□□ 0.73
TGFB1-201ENST00000221930 NSD2O96028 1365 aa19.62■□□□□ 0.73
TGFB1-201ENST00000221930 U2SURPO15042 1029 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms