RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 GSE1Q14687 1217 aa17.93■□□□□ 0.46
UBR5-201ENST00000220959 TSPYL4Q9UJ04 414 aa17.93■□□□□ 0.46
UBR5-201ENST00000220959 HSP90B2PQ58FF3 399 aa17.93■□□□□ 0.46
UBR5-201ENST00000220959 ATF3P18847 181 aa17.92■□□□□ 0.46
UBR5-201ENST00000220959 MAP7D2Q96T17 732 aa17.92■□□□□ 0.46
UBR5-201ENST00000220959 NAT10Q9H0A0 1025 aaKnown RBP17.92■□□□□ 0.46
UBR5-201ENST00000220959 CAGE1Q8TC20 777 aa17.92■□□□□ 0.46
UBR5-201ENST00000220959 NOM1Q5C9Z4 860 aaKnown RBP17.92■□□□□ 0.46
UBR5-201ENST00000220959 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
UBR5-201ENST00000220959 PDILTQ8N807 584 aa17.92■□□□□ 0.46
UBR5-201ENST00000220959 IFT57Q9NWB7 429 aa17.91■□□□□ 0.46
UBR5-201ENST00000220959 NUCB2P80303 420 aa17.91■□□□□ 0.46
UBR5-201ENST00000220959 AIMP1Q12904 312 aaKnown RBP17.91■□□□□ 0.46
UBR5-201ENST00000220959 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.46
UBR5-201ENST00000220959 SYCP1Q15431 976 aa17.89■□□□□ 0.46
UBR5-201ENST00000220959 CHMP5Q9NZZ3 219 aa17.89■□□□□ 0.46
UBR5-201ENST00000220959 DZIP1LQ8IYY4 767 aaKnown RBP17.89■□□□□ 0.45
UBR5-201ENST00000220959 CCDC191Q8NCU4 936 aa17.89■□□□□ 0.45
UBR5-201ENST00000220959 APAF1O14727 1248 aa17.89■□□□□ 0.45
UBR5-201ENST00000220959 SART3Q15020 963 aaKnown RBP17.88■□□□□ 0.45
UBR5-201ENST00000220959 CDK5RAP3Q96JB5 506 aa17.88■□□□□ 0.45
UBR5-201ENST00000220959 TSHZ2Q9NRE2 1034 aa17.88■□□□□ 0.45
UBR5-201ENST00000220959 NINLQ9Y2I6 1382 aa17.87■□□□□ 0.45
UBR5-201ENST00000220959 SDF4Q9BRK5 362 aa17.87■□□□□ 0.45
UBR5-201ENST00000220959 TTLL5Q6EMB2 1281 aa17.86■□□□□ 0.45
UBR5-201ENST00000220959 FAM13BQ9NYF5 915 aa17.86■□□□□ 0.45
UBR5-201ENST00000220959 TBC1D2BQ9UPU7 963 aa17.86■□□□□ 0.45
UBR5-201ENST00000220959 TDRD9Q8NDG6 1382 aaKnown RBP17.86■□□□□ 0.45
UBR5-201ENST00000220959 NEFHP12036 1026 aa17.86■□□□□ 0.45
UBR5-201ENST00000220959 PSMA5P28066 241 aa17.86■□□□□ 0.45
UBR5-201ENST00000220959 EXOC6Q8TAG9 804 aa17.86■□□□□ 0.45
UBR5-201ENST00000220959 SLC3A2P08195 630 aaKnown RBP17.86■□□□□ 0.45
UBR5-201ENST00000220959 ERCC4Q92889 916 aaPredicted RBP17.86■□□□□ 0.45
UBR5-201ENST00000220959 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.86■□□□□ 0.45
UBR5-201ENST00000220959 MAGEC2Q9UBF1 373 aaPredicted RBP17.86■□□□□ 0.45
UBR5-201ENST00000220959 ZRSR2Q15696 482 aaKnown RBP17.85■□□□□ 0.45
UBR5-201ENST00000220959 KDM4AO75164 1064 aa17.85■□□□□ 0.45
UBR5-201ENST00000220959 SKIDA1Q1XH10 827 aa17.85■□□□□ 0.45
UBR5-201ENST00000220959 TXLNAP40222 546 aa17.84■□□□□ 0.45
UBR5-201ENST00000220959 FILIP1LQ4L180 1135 aa17.84■□□□□ 0.45
UBR5-201ENST00000220959 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
UBR5-201ENST00000220959 SMARCE1Q969G3 411 aa17.84■□□□□ 0.45
UBR5-201ENST00000220959 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.84■□□□□ 0.45
UBR5-201ENST00000220959 VSIG10Q8N0Z9 540 aa17.84■□□□□ 0.45
UBR5-201ENST00000220959 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.45
UBR5-201ENST00000220959 GNAI1P63096 354 aa17.83■□□□□ 0.44
UBR5-201ENST00000220959 UBTFL1P0CB47 393 aaPredicted RBP17.83■□□□□ 0.44
UBR5-201ENST00000220959 BCL11BQ9C0K0 894 aaPredicted RBP17.82■□□□□ 0.44
UBR5-201ENST00000220959 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
UBR5-201ENST00000220959 H0YHG0 523 aa17.82■□□□□ 0.44
UBR5-201ENST00000220959 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
UBR5-201ENST00000220959 LNPKQ9C0E8 428 aa17.82■□□□□ 0.44
UBR5-201ENST00000220959 KRT18P05783 430 aaKnown RBP17.81■□□□□ 0.44
UBR5-201ENST00000220959 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
UBR5-201ENST00000220959 NLRP2Q9NX02 1062 aa17.81■□□□□ 0.44
UBR5-201ENST00000220959 HMOX1P09601 288 aa17.81■□□□□ 0.44
UBR5-201ENST00000220959 PPP1R1BQ9UD71 204 aaPredicted RBP17.8■□□□□ 0.44
UBR5-201ENST00000220959 SEPT7Q16181 437 aaKnown RBP17.79■□□□□ 0.44
UBR5-201ENST00000220959 CYB5RLQ6IPT4 315 aa17.79■□□□□ 0.44
UBR5-201ENST00000220959 ERLIN2O94905 339 aa17.79■□□□□ 0.44
UBR5-201ENST00000220959 ATP2B2Q01814 1243 aa17.78■□□□□ 0.44
UBR5-201ENST00000220959 SF3B2Q13435 895 aaKnown RBP17.78■□□□□ 0.44
UBR5-201ENST00000220959 ATP2B1P20020 1258 aa17.78■□□□□ 0.44
UBR5-201ENST00000220959 BRPF1P55201 1214 aaPredicted RBP17.78■□□□□ 0.44
UBR5-201ENST00000220959 CLASRPQ8N2M8 674 aaKnown RBP17.78■□□□□ 0.44
UBR5-201ENST00000220959 FSD1Q9BTV5 496 aa17.78■□□□□ 0.44
UBR5-201ENST00000220959 PDCL3Q9H2J4 239 aa17.78■□□□□ 0.44
UBR5-201ENST00000220959 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.44
UBR5-201ENST00000220959 LETM1O95202 739 aaPredicted RBP17.77■□□□□ 0.43
UBR5-201ENST00000220959 ANKRD18AQ8IVF6 992 aa17.77■□□□□ 0.43
UBR5-201ENST00000220959 ANKRD62A6NC57 917 aa17.76■□□□□ 0.43
UBR5-201ENST00000220959 CWC15Q9P013 229 aaKnown RBP17.76■□□□□ 0.43
UBR5-201ENST00000220959 KINO60870 393 aaKnown RBP17.76■□□□□ 0.43
UBR5-201ENST00000220959 SMC2O95347 1197 aa17.76■□□□□ 0.43
UBR5-201ENST00000220959 C22orf23Q9BZE7 217 aa17.76■□□□□ 0.43
UBR5-201ENST00000220959 DNAJC2Q99543 621 aaKnown RBP17.75■□□□□ 0.43
UBR5-201ENST00000220959 CNNM1Q9NRU3 951 aa17.75■□□□□ 0.43
UBR5-201ENST00000220959 HIP1O00291 1037 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 ZNHIT6Q9NWK9 470 aaKnown RBP17.74■□□□□ 0.43
UBR5-201ENST00000220959 ZBED9Q6R2W3 1325 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 USP47Q96K76 1375 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 CCDC39Q9UFE4 941 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 TRIM5Q9C035 493 aa17.74■□□□□ 0.43
UBR5-201ENST00000220959 GNL3LQ9NVN8 582 aaKnown RBP17.73■□□□□ 0.43
UBR5-201ENST00000220959 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
UBR5-201ENST00000220959 TTC39AQ5SRH9 613 aa17.73■□□□□ 0.43
UBR5-201ENST00000220959 RBM42Q9BTD8 480 aaKnown RBP17.73■□□□□ 0.43
UBR5-201ENST00000220959 CCP110O43303 1012 aa17.73■□□□□ 0.43
UBR5-201ENST00000220959 PIP4K2AP48426 406 aaPredicted RBP17.73■□□□□ 0.43
UBR5-201ENST00000220959 LUC7LQ9NQ29 371 aaKnown RBP17.73■□□□□ 0.43
UBR5-201ENST00000220959 CDC45O75419 566 aa17.72■□□□□ 0.43
UBR5-201ENST00000220959 ZHX3Q9H4I2 956 aa17.72■□□□□ 0.43
UBR5-201ENST00000220959 FHOD3Q2V2M9 1422 aa17.72■□□□□ 0.43
UBR5-201ENST00000220959 DHX57Q6P158 1386 aaKnown RBP17.72■□□□□ 0.43
UBR5-201ENST00000220959 CCDC158Q5M9N0 1113 aa17.71■□□□□ 0.43
UBR5-201ENST00000220959 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
UBR5-201ENST00000220959 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms