RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 SNX21Q969T3 373 aa10.71□□□□□ -0.69
SUPT16H-201ENST00000216297 DDX19BQ9UMR2 479 aa10.71□□□□□ -0.69
SUPT16H-201ENST00000216297 WWC1Q8IX03 1113 aa10.71□□□□□ -0.7
SUPT16H-201ENST00000216297 TTC12Q9H892 705 aaPredicted RBP10.7□□□□□ -0.7
SUPT16H-201ENST00000216297 NINLQ9Y2I6 1382 aa10.7□□□□□ -0.7
SUPT16H-201ENST00000216297 MORC1Q86VD1 984 aa10.7□□□□□ -0.7
SUPT16H-201ENST00000216297 CFAP53Q96M91 514 aa10.7□□□□□ -0.7
SUPT16H-201ENST00000216297 DMRT2Q9Y5R5 561 aa10.7□□□□□ -0.7
SUPT16H-201ENST00000216297 ZMYM4Q5VZL5 1548 aa10.7□□□□□ -0.7
SUPT16H-201ENST00000216297 SPC24Q8NBT2 197 aa10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 USP25Q9UHP3 1055 aa10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 BIVM-ERCC5R4GMW8 1640 aa10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 ZNF445P59923 1031 aa10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 ATP2B3Q16720 1220 aa10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 LRSAM1Q6UWE0 723 aa10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 MBD3O95983 291 aa10.69□□□□□ -0.7
SUPT16H-201ENST00000216297 TCP11L2Q8N4U5 519 aa10.68□□□□□ -0.7
SUPT16H-201ENST00000216297 GOLGA6L6A8MZA4 724 aa10.68□□□□□ -0.7
SUPT16H-201ENST00000216297 IPO8O15397 1037 aaKnown RBP10.68□□□□□ -0.7
SUPT16H-201ENST00000216297 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
SUPT16H-201ENST00000216297 DENND4BO75064 1496 aaPredicted RBP10.67□□□□□ -0.7
SUPT16H-201ENST00000216297 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
SUPT16H-201ENST00000216297 AEBP2Q6ZN18 517 aaPredicted RBP10.67□□□□□ -0.7
SUPT16H-201ENST00000216297 NGEFQ8N5V2 710 aa10.67□□□□□ -0.7
SUPT16H-201ENST00000216297 IFT57Q9NWB7 429 aa10.67□□□□□ -0.7
SUPT16H-201ENST00000216297 HECW1Q76N89 1606 aa10.67□□□□□ -0.7
SUPT16H-201ENST00000216297 DISP3Q9P2K9 1392 aa10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 EHBP1L1Q8N3D4 1523 aa10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 BCORL1Q5H9F3 1711 aa10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 RABEP1Q15276 862 aa10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 ZNF692Q9BU19 519 aaPredicted RBP10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 DAPK1P53355 1430 aa10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 RBM25P49756 843 aaKnown RBP10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 TIGD1Q96MW7 591 aa10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 CHD1LQ86WJ1 897 aa10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 TSR2Q969E8 191 aaKnown RBP10.66□□□□□ -0.7
SUPT16H-201ENST00000216297 KDM6BO15054 1643 aa10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 EFCAB5A4FU69 1503 aa10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 NPHP1O15259 732 aa10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 CD2BP2O95400 341 aaKnown RBP10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 ABCA5Q8WWZ7 1642 aa10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 CDC45O75419 566 aa10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 CERS3Q8IU89 383 aa10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 RUNDC1Q96C34 613 aa10.65□□□□□ -0.7
SUPT16H-201ENST00000216297 C1orf115Q9H7X2 142 aa10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 LMBRD1Q9NUN5 540 aa10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 ADCY5O95622 1261 aa10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 IRX3P78415 501 aaPredicted RBP10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 CHAMP1Q96JM3 812 aa10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 DNAJC2Q99543 621 aaKnown RBP10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 TMEM51Q9NW97 253 aa10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 ERBINQ96RT1 1412 aa10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 CWC22Q9HCG8 908 aaKnown RBP10.64□□□□□ -0.71
SUPT16H-201ENST00000216297 TBC1D9Q6ZT07 1266 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 GDPD2Q9HCC8 539 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 RALGAPBQ86X10 1494 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 TRIM6-TRIM34B2RNG4 842 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 TRIM34Q9BYJ4 488 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 TMEM63CQ9P1W3 806 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 EXOSC9Q06265 439 aaKnown RBP10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 PKP1Q13835 747 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 PIBF1Q8WXW3 757 aa10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 NOB1Q9ULX3 412 aaKnown RBP10.63□□□□□ -0.71
SUPT16H-201ENST00000216297 TDRD9Q8NDG6 1382 aaKnown RBP10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 ZNF521Q96K83 1311 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 ROCK1Q13464 1354 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 ANKRD50Q9ULJ7 1429 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 ABCC5O15440 1437 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 PDLIM2Q96JY6 352 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 OGFRQ9NZT2 677 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 CALCOCO1Q9P1Z2 691 aa10.62□□□□□ -0.71
SUPT16H-201ENST00000216297 ZGPATQ8N5A5 531 aaKnown RBP10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 TMEM57Q8N5G2 664 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 CCDC112Q8NEF3 446 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 CHMP3Q9Y3E7 222 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 NEK4P51957 841 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 ATF7IPQ6VMQ6 1270 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 C16orf45Q96MC5 204 aaPredicted RBP10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 FEZ1Q99689 392 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 APPP05067 770 aa10.61□□□□□ -0.71
SUPT16H-201ENST00000216297 GPT2Q8TD30 523 aa10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 HCLS1P14317 486 aaPredicted RBP10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 TPD52L1Q16890 204 aaPredicted RBP10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 TRMT2AQ8IZ69 625 aaKnown RBP10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 ELL2O00472 640 aaPredicted RBP10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 TRIM27P14373 513 aa10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 BMP2KLQ5H9B9 411 aa10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
SUPT16H-201ENST00000216297 FAM184AQ8NB25 1140 aa10.59□□□□□ -0.71
SUPT16H-201ENST00000216297 IBTKQ9P2D0 1353 aaPredicted RBP10.59□□□□□ -0.71
SUPT16H-201ENST00000216297 MCCP23508 829 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms