RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 PRAG1Q86YV5 1406 aa16.38■□□□□ 0.21
HDAC7-201ENST00000080059 C14orf93Q9H972 538 aaKnown RBP16.38■□□□□ 0.21
HDAC7-201ENST00000080059 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
HDAC7-201ENST00000080059 RTEL1-TNFRSF6BF6WH68 1400 aa16.37■□□□□ 0.21
HDAC7-201ENST00000080059 API5Q9BZZ5 524 aaKnown RBP16.37■□□□□ 0.21
HDAC7-201ENST00000080059 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
HDAC7-201ENST00000080059 RRS1Q15050 365 aaKnown RBP16.37■□□□□ 0.21
HDAC7-201ENST00000080059 C20orf194Q5TEA3 1177 aa16.37■□□□□ 0.21
HDAC7-201ENST00000080059 PDE3AQ14432 1141 aa16.36■□□□□ 0.21
HDAC7-201ENST00000080059 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
HDAC7-201ENST00000080059 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
HDAC7-201ENST00000080059 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
HDAC7-201ENST00000080059 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
HDAC7-201ENST00000080059 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-201ENST00000080059 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
HDAC7-201ENST00000080059 KIAA1211Q6ZU35 1233 aa16.35■□□□□ 0.21
HDAC7-201ENST00000080059 ABTB2Q8N961 1025 aa16.35■□□□□ 0.21
HDAC7-201ENST00000080059 FKBP5Q13451 457 aaPredicted RBP16.35■□□□□ 0.21
HDAC7-201ENST00000080059 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
HDAC7-201ENST00000080059 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
HDAC7-201ENST00000080059 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
HDAC7-201ENST00000080059 WDR63Q8IWG1 891 aa16.34■□□□□ 0.21
HDAC7-201ENST00000080059 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-201ENST00000080059 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
HDAC7-201ENST00000080059 NUDT16Q96DE0 195 aaKnown RBP16.34■□□□□ 0.21
HDAC7-201ENST00000080059 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
HDAC7-201ENST00000080059 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
HDAC7-201ENST00000080059 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
HDAC7-201ENST00000080059 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
HDAC7-201ENST00000080059 TMPOP42166 694 aaKnown RBP16.32■□□□□ 0.2
HDAC7-201ENST00000080059 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
HDAC7-201ENST00000080059 TWISTNBQ3B726 338 aaPredicted RBP16.31■□□□□ 0.2
HDAC7-201ENST00000080059 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
HDAC7-201ENST00000080059 NOB1Q9ULX3 412 aaKnown RBP16.31■□□□□ 0.2
HDAC7-201ENST00000080059 SHANK2Q9UPX8 1470 aa16.31■□□□□ 0.2
HDAC7-201ENST00000080059 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
HDAC7-201ENST00000080059 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
HDAC7-201ENST00000080059 RILPL2Q969X0 211 aa16.3■□□□□ 0.2
HDAC7-201ENST00000080059 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
HDAC7-201ENST00000080059 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
HDAC7-201ENST00000080059 PDZRN3Q9UPQ7 1066 aa16.3■□□□□ 0.2
HDAC7-201ENST00000080059 A2MP01023 1474 aa16.29■□□□□ 0.2
HDAC7-201ENST00000080059 C1orf115Q9H7X2 142 aa16.29■□□□□ 0.2
HDAC7-201ENST00000080059 TEX14Q8IWB6 1497 aa16.29■□□□□ 0.2
HDAC7-201ENST00000080059 FBLN1P23142 703 aa16.29■□□□□ 0.2
HDAC7-201ENST00000080059 PLCB2Q00722 1185 aa16.29■□□□□ 0.2
HDAC7-201ENST00000080059 BACH2Q9BYV9 841 aa16.29■□□□□ 0.2
HDAC7-201ENST00000080059 NPHP1O15259 732 aa16.28■□□□□ 0.2
HDAC7-201ENST00000080059 NME9Q86XW9 330 aa16.28■□□□□ 0.2
HDAC7-201ENST00000080059 ADGRL2O95490 1459 aa16.28■□□□□ 0.2
HDAC7-201ENST00000080059 FCHSD2O94868 740 aa16.28■□□□□ 0.2
HDAC7-201ENST00000080059 ABCC2Q92887 1545 aa16.28■□□□□ 0.2
HDAC7-201ENST00000080059 GBP4Q96PP9 640 aa16.28■□□□□ 0.2
HDAC7-201ENST00000080059 AAMPQ13685 434 aa16.27■□□□□ 0.2
HDAC7-201ENST00000080059 ATF7IPQ6VMQ6 1270 aa16.27■□□□□ 0.2
HDAC7-201ENST00000080059 HDAC5Q9UQL6 1122 aa16.27■□□□□ 0.2
HDAC7-201ENST00000080059 PTMAP06454 111 aaKnown RBP16.26■□□□□ 0.19
HDAC7-201ENST00000080059 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
HDAC7-201ENST00000080059 C9orf78Q9NZ63 289 aaPredicted RBP16.24■□□□□ 0.19
HDAC7-201ENST00000080059 PARD3Q8TEW0 1356 aa16.24■□□□□ 0.19
HDAC7-201ENST00000080059 ZNF518AQ6AHZ1 1483 aa16.24■□□□□ 0.19
HDAC7-201ENST00000080059 KDM6BO15054 1643 aa16.24■□□□□ 0.19
HDAC7-201ENST00000080059 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
HDAC7-201ENST00000080059 NLRP2Q9NX02 1062 aa16.24■□□□□ 0.19
HDAC7-201ENST00000080059 RARSP54136 660 aaKnown RBP16.23■□□□□ 0.19
HDAC7-201ENST00000080059 MVPQ14764 893 aaKnown RBP16.23■□□□□ 0.19
HDAC7-201ENST00000080059 WASLO00401 505 aaPredicted RBP16.23■□□□□ 0.19
HDAC7-201ENST00000080059 ATF3P18847 181 aa16.22■□□□□ 0.19
HDAC7-201ENST00000080059 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
HDAC7-201ENST00000080059 CARD14Q9BXL6 1004 aa16.22■□□□□ 0.19
HDAC7-201ENST00000080059 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
HDAC7-201ENST00000080059 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
HDAC7-201ENST00000080059 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
HDAC7-201ENST00000080059 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
HDAC7-201ENST00000080059 C22orf23Q9BZE7 217 aa16.22■□□□□ 0.19
HDAC7-201ENST00000080059 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
HDAC7-201ENST00000080059 CCDC9Q9Y3X0 531 aaKnown RBP16.22■□□□□ 0.19
HDAC7-201ENST00000080059 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
HDAC7-201ENST00000080059 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.19
HDAC7-201ENST00000080059 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
HDAC7-201ENST00000080059 GPATCH3Q96I76 525 aa16.21■□□□□ 0.19
HDAC7-201ENST00000080059 ST18O60284 1047 aa16.21■□□□□ 0.19
HDAC7-201ENST00000080059 FOXD4L5Q5VV16 416 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-201ENST00000080059 FOXD4L4Q8WXT5 416 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-201ENST00000080059 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
HDAC7-201ENST00000080059 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-201ENST00000080059 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
HDAC7-201ENST00000080059 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
HDAC7-201ENST00000080059 TTC5Q8N0Z6 440 aa16.2■□□□□ 0.18
HDAC7-201ENST00000080059 GPRASP1Q5JY77 1395 aa16.2■□□□□ 0.18
HDAC7-201ENST00000080059 UHRF1BP1Q6BDS2 1440 aa16.2■□□□□ 0.18
HDAC7-201ENST00000080059 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-201ENST00000080059 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
HDAC7-201ENST00000080059 ANKLE2Q86XL3 938 aa16.19■□□□□ 0.18
HDAC7-201ENST00000080059 FYB1O15117 783 aa16.19■□□□□ 0.18
HDAC7-201ENST00000080059 EVA1CP58658 441 aa16.19■□□□□ 0.18
HDAC7-201ENST00000080059 AIMP1Q12904 312 aaKnown RBP16.19■□□□□ 0.18
HDAC7-201ENST00000080059 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
HDAC7-201ENST00000080059 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
HDAC7-201ENST00000080059 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms