RNA–Protein interactions for RNA: ENSMUST00000109111.1

Clk4-202, Transcript of Dual specificity protein kinase CLK4, mousemouse

TSL 2 BASIC

Gene Clk4, Length 1,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-202ENSMUST00000109111 Usp46P62069 366 aa9.28□□□□□ -0.92
Clk4-202ENSMUST00000109111 Pnma5Q5DTT8 618 aa9.27□□□□□ -0.93
Clk4-202ENSMUST00000109111 Nfx1B1AY10 1114 aaKnown RBP9.26□□□□□ -0.93
Clk4-202ENSMUST00000109111 Catsper2A2ARP9 588 aa9.25□□□□□ -0.93
Clk4-202ENSMUST00000109111 Siah2Q06986 325 aa9.25□□□□□ -0.93
Clk4-202ENSMUST00000109111 Stk11ipQ3TAA7 1072 aa9.25□□□□□ -0.93
Clk4-202ENSMUST00000109111 Lrch3Q8BVU0 778 aa9.25□□□□□ -0.93
Clk4-202ENSMUST00000109111 Cep120Q7TSG1 988 aa9.24□□□□□ -0.93
Clk4-202ENSMUST00000109111 Spns2Q91VM4 549 aa9.24□□□□□ -0.93
Clk4-202ENSMUST00000109111 Irf5P56477 497 aa9.23□□□□□ -0.93
Clk4-202ENSMUST00000109111 Taok2Q6ZQ29 1240 aa9.23□□□□□ -0.93
Clk4-202ENSMUST00000109111 Rtn1Q8K0T0 780 aa9.23□□□□□ -0.93
Clk4-202ENSMUST00000109111 KhsrpQ3U0V1 748 aaKnown RBP9.22□□□□□ -0.93
Clk4-202ENSMUST00000109111 Gm7137J3QMW1 236 aa9.21□□□□□ -0.94
Clk4-202ENSMUST00000109111 Arid3aQ62431 601 aa9.21□□□□□ -0.94
Clk4-202ENSMUST00000109111 Atxn7Q8R4I1 867 aa9.21□□□□□ -0.94
Clk4-202ENSMUST00000109111 Irs1P35569 1233 aa9.2□□□□□ -0.94
Clk4-202ENSMUST00000109111 4930504O13RikQ8C5Z9 145 aa9.2□□□□□ -0.94
Clk4-202ENSMUST00000109111 Fbxo18Q8K2I9 1042 aa9.2□□□□□ -0.94
Clk4-202ENSMUST00000109111 Ppp1r3fQ9JIG4 799 aa9.2□□□□□ -0.94
Clk4-202ENSMUST00000109111 Tmem151aQ6GQT5 468 aa9.19□□□□□ -0.94
Clk4-202ENSMUST00000109111 Fkbp15Q6P9Q6 1216 aaKnown RBP9.18□□□□□ -0.94
Clk4-202ENSMUST00000109111 Pacs2Q3V3Q7 862 aa9.17□□□□□ -0.94
Clk4-202ENSMUST00000109111 Q9CYS6 286 aa9.17□□□□□ -0.94
Clk4-202ENSMUST00000109111 Zcchc6Q5BLK4 1491 aaKnown RBP9.16□□□□□ -0.94
Clk4-202ENSMUST00000109111 Usp3Q91W36 520 aaKnown RBP9.16□□□□□ -0.94
Clk4-202ENSMUST00000109111 Speer3W4VSP1 261 aa9.16□□□□□ -0.94
Clk4-202ENSMUST00000109111 Crybg2B7ZCC2 1516 aa9.16□□□□□ -0.94
Clk4-202ENSMUST00000109111 AlyrefO08583 255 aaKnown RBP9.15□□□□□ -0.94
Clk4-202ENSMUST00000109111 FechP22315 420 aaKnown RBP9.15□□□□□ -0.94
Clk4-202ENSMUST00000109111 Pola2P33611 600 aa9.15□□□□□ -0.94
Clk4-202ENSMUST00000109111 Adamts19P59509 1210 aa9.15□□□□□ -0.94
Clk4-202ENSMUST00000109111 Sox18P43680 377 aa9.14□□□□□ -0.95
Clk4-202ENSMUST00000109111 Spaca7Q9D2S4 182 aa9.14□□□□□ -0.95
Clk4-202ENSMUST00000109111 Gdf11Q9Z1W4 405 aa9.14□□□□□ -0.95
Clk4-202ENSMUST00000109111 Zc3h15Q3TIV5 426 aaKnown RBP9.14□□□□□ -0.95
Clk4-202ENSMUST00000109111 Kirrel2Q7TSU7 700 aa9.14□□□□□ -0.95
Clk4-202ENSMUST00000109111 Trim47Q8C0E3 641 aa9.14□□□□□ -0.95
Clk4-202ENSMUST00000109111 Atf4Q06507 349 aa9.13□□□□□ -0.95
Clk4-202ENSMUST00000109111 Slc10a4Q3UEZ8 437 aa9.13□□□□□ -0.95
Clk4-202ENSMUST00000109111 GopcQ8BH60 463 aa9.13□□□□□ -0.95
Clk4-202ENSMUST00000109111 Dsc3P55850 896 aa9.12□□□□□ -0.95
Clk4-202ENSMUST00000109111 MetrnlQ8VE43 311 aa9.12□□□□□ -0.95
Clk4-202ENSMUST00000109111 Capn5O08688 640 aaKnown RBP9.11□□□□□ -0.95
Clk4-202ENSMUST00000109111 P01644 108 aa9.11□□□□□ -0.95
Clk4-202ENSMUST00000109111 Kcnj4P52189 445 aa9.1□□□□□ -0.95
Clk4-202ENSMUST00000109111 5730596B20RikQ8BQ08 205 aa9.1□□□□□ -0.95
Clk4-202ENSMUST00000109111 Tll2Q9WVM6 1012 aa9.1□□□□□ -0.95
Clk4-202ENSMUST00000109111 Bmp1P98063 991 aa9.09□□□□□ -0.95
Clk4-202ENSMUST00000109111 Zbtb38Q3LR78 1197 aa9.09□□□□□ -0.95
Clk4-202ENSMUST00000109111 Agbl2Q8CDK2 862 aa9.09□□□□□ -0.95
Clk4-202ENSMUST00000109111 Nek1P51954 1203 aa9.08□□□□□ -0.96
Clk4-202ENSMUST00000109111 Rc3h1Q4VGL6 1130 aaKnown RBP9.08□□□□□ -0.96
Clk4-202ENSMUST00000109111 Pcdhb16Q91Y03 802 aa9.08□□□□□ -0.96
Clk4-202ENSMUST00000109111 Kat6aQ8BZ21 2003 aa9.08□□□□□ -0.96
Clk4-202ENSMUST00000109111 Lce1a1Q9CQH5 143 aa9.07□□□□□ -0.96
Clk4-202ENSMUST00000109111 Lce1gQ9D195 139 aa9.07□□□□□ -0.96
Clk4-202ENSMUST00000109111 Rtl1Q7M732 1744 aa9.07□□□□□ -0.96
Clk4-202ENSMUST00000109111 PtprnQ60673 979 aa9.06□□□□□ -0.96
Clk4-202ENSMUST00000109111 Znf511Q6P0X2 227 aa9.06□□□□□ -0.96
Clk4-202ENSMUST00000109111 LmlnQ8BMN4 681 aa9.06□□□□□ -0.96
Clk4-202ENSMUST00000109111 Pcdhb3Q91XZ7 784 aa9.06□□□□□ -0.96
Clk4-202ENSMUST00000109111 Leng1Q9DB98 261 aa9.06□□□□□ -0.96
Clk4-202ENSMUST00000109111 Pds5bQ4VA53 1446 aaKnown RBP9.06□□□□□ -0.96
Clk4-202ENSMUST00000109111 Fam117aQ7TNF9 451 aa9.05□□□□□ -0.96
Clk4-202ENSMUST00000109111 Gimap6Q8K349 305 aa9.04□□□□□ -0.96
Clk4-202ENSMUST00000109111 Gm9508A0A1W2P7W0 230 aa9.03□□□□□ -0.96
Clk4-202ENSMUST00000109111 Ankrd33bQ3U0L2 486 aa9.03□□□□□ -0.96
Clk4-202ENSMUST00000109111 Dlk2Q8K1E3 382 aa9.03□□□□□ -0.96
Clk4-202ENSMUST00000109111 Cts7Q91ZF2 331 aa9.03□□□□□ -0.96
Clk4-202ENSMUST00000109111 Fut2Q9JL27 347 aa9.03□□□□□ -0.96
Clk4-202ENSMUST00000109111 Rgs20Q9QZB1 239 aa9.03□□□□□ -0.96
Clk4-202ENSMUST00000109111 Pik3r2O08908 722 aa9.02□□□□□ -0.97
Clk4-202ENSMUST00000109111 FanccP50652 591 aa9.02□□□□□ -0.97
Clk4-202ENSMUST00000109111 Smarca2Q6DIC0 1577 aa9.02□□□□□ -0.97
Clk4-202ENSMUST00000109111 Dsg2O55111 1122 aa9.01□□□□□ -0.97
Clk4-202ENSMUST00000109111 JundP15066 341 aa9.01□□□□□ -0.97
Clk4-202ENSMUST00000109111 Epb42P49222 691 aa9.01□□□□□ -0.97
Clk4-202ENSMUST00000109111 Thoc2B1AZI6 1594 aaKnown RBP9□□□□□ -0.97
Clk4-202ENSMUST00000109111 Chtf18Q8BIW9 969 aa9□□□□□ -0.97
Clk4-202ENSMUST00000109111 Ncbp3Q8BZR9 615 aaKnown RBP9□□□□□ -0.97
Clk4-202ENSMUST00000109111 Fgd1P52734 960 aa8.99□□□□□ -0.97
Clk4-202ENSMUST00000109111 Nop53Q8BK35 484 aaKnown RBP8.99□□□□□ -0.97
Clk4-202ENSMUST00000109111 Smarca4Q3TKT4 1613 aaKnown RBP8.99□□□□□ -0.97
Clk4-202ENSMUST00000109111 PspnO70300 156 aa8.98□□□□□ -0.97
Clk4-202ENSMUST00000109111 Dnmt3aO88508 908 aaKnown RBP8.98□□□□□ -0.97
Clk4-202ENSMUST00000109111 MarsQ68FL6 902 aaKnown RBP8.98□□□□□ -0.97
Clk4-202ENSMUST00000109111 Zbtb42Q811H0 420 aa8.98□□□□□ -0.97
Clk4-202ENSMUST00000109111 SrfQ9JM73 504 aa8.98□□□□□ -0.97
Clk4-202ENSMUST00000109111 Gsk3aQ2NL51 490 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Igflr1Q3U4N7 345 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 PlvapQ91VC4 438 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Atad2bE9Q166 1460 aaKnown RBP8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Rhox1B1APN4 224 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Hcn4O70507 1186 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Msx1P13297 303 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Atp6v1aP50516 617 aaKnown RBP8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Themis2Q91YX0 663 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 Tmem132aQ922P8 1018 aa8.97□□□□□ -0.97
Clk4-202ENSMUST00000109111 InhbbQ04999 411 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms