RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Stard8Q8K031 1019 aa23.91■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Sart3Q9JLI8 962 aaKnown RBP23.91■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 NudcO35685 332 aaKnown RBP23.9■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Topbp1Q6ZQF0 1515 aa23.9■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Prdm2A2A7B5 1709 aaKnown RBP23.9■■□□□ 1.42
Ccdc3-201ENSMUST00000027988 Myom2Q14BI5 1463 aa23.88■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Ptch1Q61115 1434 aa23.87■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Stag3O70576 1240 aa23.87■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Hsp90aa1P07901 733 aaKnown RBP23.86■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 IbtkQ6ZPR6 1352 aaKnown RBP23.86■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Zranb1Q7M760 708 aa23.86■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Scaf11E9PZM7 1456 aaKnown RBP23.85■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Ralbp1Q62172 648 aa23.85■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Uggt1Q6P5E4 1551 aa23.85■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Rlbp1Q9Z275 317 aa23.85■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 4930567H17RikQ3V0K5 233 aa23.84■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Gli2Q0VGT2 1544 aa23.83■■□□□ 1.41
Ccdc3-201ENSMUST00000027988 Apaf1O88879 1249 aa23.82■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 OvosQ3UU35 1456 aa23.81■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Iqsec2Q5DU25 1478 aa23.81■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Znf521Q6KAS7 1311 aa23.8■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 GsdmaQ9EST1 446 aa23.8■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Duxf3A0A0N4SV92 674 aa23.79■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Polr3glQ8R0C0 218 aa23.79■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Lrrc7Q80TE7 1490 aa23.79■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Map4k4P97820 1233 aaKnown RBP23.79■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Armcx1Q9CX83 456 aa23.79■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Dnai1Q8C0M8 701 aa23.78■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Trim26Q99PN3 545 aa23.78■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Zmym3Q9JLM4 1370 aa23.78■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 PalldQ9ET54 1408 aa23.78■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Trim30dE9PWL0 497 aa23.78■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Eif2s2Q99L45 331 aaKnown RBP23.77■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Ak7Q9D2H2 614 aa23.77■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Cald1E9QA15 768 aaKnown RBP23.77■■□□□ 1.4
Ccdc3-201ENSMUST00000027988 Mapk8ip3Q9ESN9 1337 aa23.76■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Depdc5P61460 1591 aa23.76■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 DaxxO35613 739 aa23.76■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 InsrP15208 1372 aa23.75■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Ino80Q6ZPV2 1559 aa23.75■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 MaddQ80U28 1577 aa23.74■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Tecpr2Q3UH45 1423 aa23.74■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Ppp1r3fQ9JIG4 799 aa23.74■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 KdrP35918 1367 aa23.73■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Ift172Q6VH22 1749 aa23.73■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Stk26Q99JT2 416 aa23.73■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Skint5A7XUY5 1461 aa23.72■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 Trim58Q5NCC9 485 aa23.71■■□□□ 1.39
Ccdc3-201ENSMUST00000027988 U2af1Q9D883 239 aaKnown RBP23.7■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Ksr2Q3UVC0 959 aa23.69■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Atp10aO54827 1508 aa23.69■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Ccdc183A2AJB1 534 aa23.69■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Akap12Q9WTQ5 1684 aa23.69■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Pnmal2G3X9N3 661 aa23.68■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Ecm2Q5FW85 670 aa23.68■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Tsen2Q6P7W5 460 aa23.67■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 AdgbG3UZ78 1657 aa23.67■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Plxnc1Q9QZC2 1574 aa23.67■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 ArxO35085 564 aa23.67■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Ipo8Q7TMY7 1010 aa23.67■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Mroh1E0CZ22 1640 aa23.67■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Adgrl1Q80TR1 1466 aa23.66■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Dip2cE9PWR4 1557 aa23.66■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 IqubQ8CDK3 788 aa23.66■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Kiaa0556Q8C753 1610 aa23.65■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Cdc42bpgQ80UW5 1551 aa23.65■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Ppm1gQ61074 542 aa23.65■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Hsp90ab1P11499 724 aaKnown RBP23.64■■□□□ 1.38
Ccdc3-201ENSMUST00000027988 Mre11Q61216 706 aa23.64■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 CenpjQ569L8 1344 aa23.63■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Ttc37F8VPK0 1563 aa23.63■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 AglF8VPN4 1532 aa23.62■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 KarsQ99MN1 595 aaKnown RBP23.62■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Knl1Q66JQ7 1612 aa23.62■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Fam135bQ9DAI6 1403 aa23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Dusp27Q148W8 1138 aa23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Exosc9Q9JHI7 438 aaKnown RBP23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Pabpn1Q8CCS6 302 aaKnown RBP23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Adgrl3Q80TS3 1537 aa23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Nrxn1Q9CS84 1514 aa23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 RereQ80TZ9 1558 aa23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Cep170bQ80U49 1574 aa23.61■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Hfm1D3Z4R1 1434 aa23.6■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Rangap1P46061 589 aaKnown RBP23.6■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 4933416C03RikQ3V063 378 aa23.6■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Slc52a2Q9D8F3 450 aa23.59■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Atp1b4Q99ME6 356 aa23.59■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Yeats2Q3TUF7 1407 aa23.58■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Cfap65Q3V0B4 1847 aa23.58■■□□□ 1.37
Ccdc3-201ENSMUST00000027988 Eif2ak4Q9QZ05 1648 aa23.58■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Hecw2Q6I6G8 1578 aa23.58■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Ppp1r9bQ6R891 817 aaKnown RBP23.57■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Cluap1Q8R3P7 413 aa23.56■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Shq1Q7TMX5 569 aa23.56■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Prrc2bQ7TPM1 1486 aaKnown RBP23.55■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Med14A2ABV5 1459 aaKnown RBP23.54■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Gm6268A2A3U9 297 aa23.53■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Ccdc9Q8VC31 543 aaKnown RBP23.53■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Cul9Q80TT8 1865 aa23.53■■□□□ 1.36
Ccdc3-201ENSMUST00000027988 Ccar1Q8CH18 1146 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms