RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C YDR034C-AP0C289 58 aa2.38□□□□□ -2.03
RPA135YPR010C GAT4P40569 121 aa2.38□□□□□ -2.03
RPA135YPR010C IRC21Q04772 201 aa2.38□□□□□ -2.03
RPA135YPR010C RPL26AP05743 127 aaKnown RBP2.37□□□□□ -2.03
RPA135YPR010C RPL26BP53221 127 aaKnown RBP2.37□□□□□ -2.03
RPA135YPR010C YBL008W-AQ3E821 79 aa2.37□□□□□ -2.03
RPA135YPR010C YAL065CO13511 128 aa2.37□□□□□ -2.03
RPA135YPR010C CYC7P00045 113 aa2.37□□□□□ -2.03
RPA135YPR010C BET1P22804 142 aa2.37□□□□□ -2.03
RPA135YPR010C YCR050CP25630 102 aa2.37□□□□□ -2.03
RPA135YPR010C YJL127C-BQ3E828 52 aa2.37□□□□□ -2.03
RPA135YPR010C YPR010C-AA5Z2X5 72 aa2.36□□□□□ -2.03
RPA135YPR010C YBL039W-BP0C268 59 aa2.36□□□□□ -2.03
RPA135YPR010C SBH1P52870 82 aa2.36□□□□□ -2.03
RPA135YPR010C EDC1P53080 175 aaPredicted RBP2.36□□□□□ -2.03
RPA135YPR010C YLR285C-AQ3E771 56 aa2.36□□□□□ -2.03
RPA135YPR010C RPL33AP05744 107 aaKnown RBP2.36□□□□□ -2.03
RPA135YPR010C RPC10P40422 70 aa2.36□□□□□ -2.03
RPA135YPR010C RPL33BP41056 107 aaKnown RBP2.36□□□□□ -2.03
RPA135YPR010C YOL014WQ08110 124 aa2.36□□□□□ -2.03
RPA135YPR010C EMC6Q12431 108 aa2.36□□□□□ -2.03
RPA135YPR010C YKL023C-AQ2V2P3 75 aa2.36□□□□□ -2.03
RPA135YPR010C KRE1P17260 313 aa2.35□□□□□ -2.03
RPA135YPR010C YDR115WQ04598 105 aa2.35□□□□□ -2.03
RPA135YPR010C ECM19Q06011 112 aa2.35□□□□□ -2.03
RPA135YPR010C YHR007C-AQ07074 71 aa2.35□□□□□ -2.03
RPA135YPR010C YML100W-AQ8TGT0 57 aa2.35□□□□□ -2.03
RPA135YPR010C YLR156WP0CE96 114 aa2.35□□□□□ -2.03
RPA135YPR010C YLR159WP0CE97 114 aa2.35□□□□□ -2.03
RPA135YPR010C YLR161WP0CE98 114 aa2.35□□□□□ -2.03
RPA135YPR010C DDR2P89113 61 aa2.35□□□□□ -2.03
RPA135YPR010C YHL042WP38729 150 aa2.35□□□□□ -2.03
RPA135YPR010C TDA2P40045 126 aa2.35□□□□□ -2.03
RPA135YPR010C BSC4P53841 131 aa2.35□□□□□ -2.03
RPA135YPR010C ATP20Q12233 115 aa2.34□□□□□ -2.03
RPA135YPR010C AUA1P32450 94 aa2.34□□□□□ -2.04
RPA135YPR010C YGL041C-BQ3E750 60 aa2.34□□□□□ -2.04
RPA135YPR010C FYV5P25585 152 aa2.33□□□□□ -2.04
RPA135YPR010C ECM12O13529 151 aa2.32□□□□□ -2.04
RPA135YPR010C YIL102CP40488 101 aa2.32□□□□□ -2.04
RPA135YPR010C IGD1P43598 195 aa2.32□□□□□ -2.04
RPA135YPR010C YGL193CP53097 103 aa2.32□□□□□ -2.04
RPA135YPR010C YLR412C-AQ3E742 68 aa2.32□□□□□ -2.04
RPA135YPR010C YLL066W-BQ8TGJ7 56 aa2.32□□□□□ -2.04
RPA135YPR010C YCR085WP25650 117 aa2.32□□□□□ -2.04
RPA135YPR010C ICY1Q04329 127 aa2.32□□□□□ -2.04
RPA135YPR010C YGL149WP53116 101 aa2.31□□□□□ -2.04
RPA135YPR010C YMR230W-AQ3E7B5 62 aa2.31□□□□□ -2.04
RPA135YPR010C YBR230W-AQ3E762 66 aa2.31□□□□□ -2.04
RPA135YPR010C KSH1Q8TGJ3 72 aa2.31□□□□□ -2.04
RPA135YPR010C RPL36BO14455 100 aaKnown RBP2.31□□□□□ -2.04
RPA135YPR010C MIC10Q96VH5 97 aa2.31□□□□□ -2.04
RPA135YPR010C ATP18P81450 59 aa2.3□□□□□ -2.04
RPA135YPR010C KTI11Q3E840 82 aa2.3□□□□□ -2.04
RPA135YPR010C YNL162W-AQ3E7A8 72 aa2.3□□□□□ -2.04
RPA135YPR010C YLR236CA0A023PZG4 107 aa2.3□□□□□ -2.04
RPA135YPR010C RSM18P40033 138 aa2.3□□□□□ -2.04
RPA135YPR010C YER078W-AQ3E7A2 54 aa2.3□□□□□ -2.04
RPA135YPR010C ICS3P47034 131 aa2.29□□□□□ -2.04
RPA135YPR010C LCL2Q08045 131 aa2.29□□□□□ -2.04
RPA135YPR010C YNL042W-BQ3E7Z2 85 aa2.29□□□□□ -2.04
RPA135YPR010C UBC4P15731 148 aa2.29□□□□□ -2.04
RPA135YPR010C HOT13P36078 116 aa2.29□□□□□ -2.04
RPA135YPR010C YOR381W-AQ3E804 55 aa2.29□□□□□ -2.04
RPA135YPR010C YHR213W-BQ8TGK1 99 aa2.29□□□□□ -2.04
RPA135YPR010C HHF1P02309 103 aaKnown RBP2.29□□□□□ -2.04
RPA135YPR010C YDL241WQ07738 123 aa2.29□□□□□ -2.04
RPA135YPR010C YDR381C-AQ3E6R5 114 aa2.29□□□□□ -2.04
RPA135YPR010C YHL018WP38744 120 aaPredicted RBP2.28□□□□□ -2.04
RPA135YPR010C YOR072WQ08486 104 aa2.28□□□□□ -2.04
RPA135YPR010C YJL133C-AQ3E7A3 74 aa2.28□□□□□ -2.04
RPA135YPR010C YFR009W-AP0C5M9 85 aa2.28□□□□□ -2.05
RPA135YPR010C YFL041W-AQ3E817 63 aa2.28□□□□□ -2.05
RPA135YPR010C RSM19P53733 91 aaPredicted RBP2.27□□□□□ -2.05
RPA135YPR010C RPL29P05747 59 aaPredicted RBP2.26□□□□□ -2.05
RPA135YPR010C YSY6P38374 65 aa2.26□□□□□ -2.05
RPA135YPR010C YFL067WP43537 175 aa2.26□□□□□ -2.05
RPA135YPR010C YBR027CP38220 110 aa2.25□□□□□ -2.05
RPA135YPR010C YEL045CP32616 141 aa2.25□□□□□ -2.05
RPA135YPR010C GIS2P53849 153 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
RPA135YPR010C YCR043CP25361 127 aa2.24□□□□□ -2.05
RPA135YPR010C YAL067W-AQ8TGK6 75 aa2.24□□□□□ -2.05
RPA135YPR010C YOR268CQ08734 132 aa2.24□□□□□ -2.05
RPA135YPR010C LCL1Q02786 101 aa2.23□□□□□ -2.05
RPA135YPR010C YLR307C-AQ3E825 87 aa2.23□□□□□ -2.05
RPA135YPR010C YHR125WP38831 101 aa2.22□□□□□ -2.05
RPA135YPR010C YLR157W-DP0CE99 70 aa2.22□□□□□ -2.05
RPA135YPR010C YDR119W-AQ2V2P9 66 aa2.21□□□□□ -2.06
RPA135YPR010C AIM4P38305 123 aaPredicted RBP2.21□□□□□ -2.06
RPA135YPR010C YER187WP40102 141 aa2.21□□□□□ -2.06
RPA135YPR010C NOP10Q6Q547 58 aaPredicted RBP2.21□□□□□ -2.06
RPA135YPR010C LIP1Q03579 150 aa2.21□□□□□ -2.06
RPA135YPR010C SOM1Q05676 74 aa2.21□□□□□ -2.06
RPA135YPR010C YOR314WQ12506 109 aa2.21□□□□□ -2.06
RPA135YPR010C YHR032W-AP0C5N6 59 aa2.2□□□□□ -2.06
RPA135YPR010C QCR10P37299 77 aa2.2□□□□□ -2.06
RPA135YPR010C YGR164WP53291 111 aa2.2□□□□□ -2.06
RPA135YPR010C COX23P38824 151 aa2.19□□□□□ -2.06
RPA135YPR010C YAR064WP39563 99 aa2.19□□□□□ -2.06
RPA135YPR010C CMC4Q3E7A9 73 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms