RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YPR010C-AA5Z2X5 72 aa2.7□□□□□ -1.98
SNF8YPL002C SEC11P15367 167 aa2.7□□□□□ -1.98
SNF8YPL002C YHR125WP38831 101 aa2.7□□□□□ -1.98
SNF8YPL002C BNS1P50084 137 aa2.7□□□□□ -1.98
SNF8YPL002C RPL33AP05744 107 aaKnown RBP2.69□□□□□ -1.98
SNF8YPL002C MRPL31P14063 131 aaPredicted RBP2.69□□□□□ -1.98
SNF8YPL002C QCR9P22289 66 aa2.69□□□□□ -1.98
SNF8YPL002C RPL33BP41056 107 aaKnown RBP2.69□□□□□ -1.98
SNF8YPL002C ERI1P62651 68 aaKnown RBP2.69□□□□□ -1.98
SNF8YPL002C BRP1P53194 125 aa2.68□□□□□ -1.98
SNF8YPL002C RGM1Q00453 211 aa2.68□□□□□ -1.98
SNF8YPL002C YMR007WQ03675 126 aa2.68□□□□□ -1.98
SNF8YPL002C YDL241WQ07738 123 aa2.68□□□□□ -1.98
SNF8YPL002C FIT2Q08906 153 aa2.68□□□□□ -1.98
SNF8YPL002C YKL023C-AQ2V2P3 75 aa2.68□□□□□ -1.98
SNF8YPL002C YBR209WP38311 105 aa2.67□□□□□ -1.98
SNF8YPL002C SPI1P40092 148 aa2.67□□□□□ -1.98
SNF8YPL002C YLR307C-AQ3E825 87 aa2.67□□□□□ -1.98
SNF8YPL002C RPS22AP0C0W1 130 aaKnown RBP2.66□□□□□ -1.98
SNF8YPL002C DCV1P43595 202 aa2.66□□□□□ -1.98
SNF8YPL002C YIL014C-AQ02598 104 aa2.66□□□□□ -1.98
SNF8YPL002C ECM19Q06011 112 aa2.66□□□□□ -1.98
SNF8YPL002C YOR314WQ12506 109 aa2.66□□□□□ -1.98
SNF8YPL002C YBR200W-AQ3E755 54 aa2.66□□□□□ -1.98
SNF8YPL002C RPL36BO14455 100 aaKnown RBP2.65□□□□□ -1.99
SNF8YPL002C RPL36AP05745 100 aaPredicted RBP2.65□□□□□ -1.99
SNF8YPL002C YSY6P38374 65 aa2.65□□□□□ -1.99
SNF8YPL002C PMP3P87284 55 aa2.65□□□□□ -1.99
SNF8YPL002C YDR115WQ04598 105 aa2.65□□□□□ -1.99
SNF8YPL002C YDR010CQ12426 110 aa2.65□□□□□ -1.99
SNF8YPL002C COX19Q3E731 98 aa2.65□□□□□ -1.99
SNF8YPL002C YHR173CP38864 112 aa2.64□□□□□ -1.99
SNF8YPL002C YEL067CP39978 195 aa2.64□□□□□ -1.99
SNF8YPL002C HUA1P40325 198 aa2.64□□□□□ -1.99
SNF8YPL002C DAD4P69851 72 aa2.64□□□□□ -1.99
SNF8YPL002C YPR153WQ06537 140 aa2.64□□□□□ -1.99
SNF8YPL002C YKL065W-AQ2V2P2 73 aa2.64□□□□□ -1.99
SNF8YPL002C RPS22BQ3E7Y3 130 aaKnown RBP2.64□□□□□ -1.99
SNF8YPL002C YLR342W-AQ3E810 57 aa2.64□□□□□ -1.99
SNF8YPL002C YMR122W-AQ3E842 84 aa2.64□□□□□ -1.99
SNF8YPL002C COX23P38824 151 aa2.63□□□□□ -1.99
SNF8YPL002C YMR141CP40211 102 aa2.63□□□□□ -1.99
SNF8YPL002C YLR194CQ05777 254 aa2.63□□□□□ -1.99
SNF8YPL002C AIM4P38305 123 aaPredicted RBP2.62□□□□□ -1.99
SNF8YPL002C SNA2P56508 79 aa2.62□□□□□ -1.99
SNF8YPL002C YCR095W-AQ3E787 52 aa2.62□□□□□ -1.99
SNF8YPL002C YAL065CO13511 128 aa2.61□□□□□ -1.99
SNF8YPL002C PFY1P07274 126 aa2.61□□□□□ -1.99
SNF8YPL002C YER188C-AP0C0V2 99 aa2.61□□□□□ -1.99
SNF8YPL002C PAU6P0CE90 120 aa2.61□□□□□ -1.99
SNF8YPL002C PAU18P0CE91 120 aa2.61□□□□□ -1.99
SNF8YPL002C PAU8P0CE92 120 aa2.61□□□□□ -1.99
SNF8YPL002C PAU11P0CE93 120 aa2.61□□□□□ -1.99
SNF8YPL002C HMRA2P0CY13 119 aa2.61□□□□□ -1.99
SNF8YPL002C PAU13P38725 120 aa2.61□□□□□ -1.99
SNF8YPL002C IGD1P43598 195 aa2.61□□□□□ -1.99
SNF8YPL002C PAU4P53427 120 aa2.61□□□□□ -1.99
SNF8YPL002C PAU10Q03050 120 aa2.61□□□□□ -1.99
SNF8YPL002C PAU9Q3E770 120 aa2.61□□□□□ -1.99
SNF8YPL002C YHR032W-AP0C5N6 59 aa2.6□□□□□ -1.99
SNF8YPL002C QCR8P08525 94 aa2.59□□□□□ -1.99
SNF8YPL002C AIM19P40502 157 aa2.59□□□□□ -1.99
SNF8YPL002C YLR162WQ06235 118 aa2.59□□□□□ -1.99
SNF8YPL002C YGR121W-AQ3E816 71 aa2.59□□□□□ -1.99
SNF8YPL002C YLR236CA0A023PZG4 107 aa2.58□□□□□ -2
SNF8YPL002C DSE2P38844 325 aa2.58□□□□□ -2
SNF8YPL002C YMR122CQ03879 124 aa2.58□□□□□ -2
SNF8YPL002C YAL067W-AQ8TGK6 75 aa2.58□□□□□ -2
SNF8YPL002C RPL26BP53221 127 aaKnown RBP2.57□□□□□ -2
SNF8YPL002C IRC21Q04772 201 aa2.57□□□□□ -2
SNF8YPL002C YKR032WP36127 104 aa2.56□□□□□ -2
SNF8YPL002C YNR077CP53758 84 aa2.56□□□□□ -2
SNF8YPL002C PAU7P39545 55 aa2.55□□□□□ -2
SNF8YPL002C YIL163CP40448 117 aa2.55□□□□□ -2
SNF8YPL002C YGL041C-BQ3E750 60 aa2.55□□□□□ -2
SNF8YPL002C YLR285C-AQ3E771 56 aa2.55□□□□□ -2
SNF8YPL002C CMC4Q3E7A9 73 aa2.55□□□□□ -2
SNF8YPL002C COA3Q3E7B2 85 aa2.55□□□□□ -2
SNF8YPL002C PAU1P0CE88 120 aa2.54□□□□□ -2
SNF8YPL002C PAU14P0CE89 120 aa2.54□□□□□ -2
SNF8YPL002C YEL014CP39999 101 aa2.54□□□□□ -2
SNF8YPL002C RPC10P40422 70 aa2.54□□□□□ -2
SNF8YPL002C MRX7P53869 86 aa2.54□□□□□ -2
SNF8YPL002C PAU20Q08322 120 aa2.54□□□□□ -2
SNF8YPL002C YDR246W-AQ3E763 66 aa2.54□□□□□ -2
SNF8YPL002C COX8P04039 78 aa2.53□□□□□ -2
SNF8YPL002C YBR027CP38220 110 aa2.53□□□□□ -2
SNF8YPL002C BSC4P53841 131 aa2.53□□□□□ -2
SNF8YPL002C YDR182W-AQ3E796 67 aa2.51□□□□□ -2.01
SNF8YPL002C YIL156W-BQ2V2P4 73 aa2.5□□□□□ -2.01
SNF8YPL002C NOP10Q6Q547 58 aaPredicted RBP2.5□□□□□ -2.01
SNF8YPL002C YGL014C-AP0C5N1 53 aa2.46□□□□□ -2.02
SNF8YPL002C RPS30AP0CX33 63 aaKnown RBP2.46□□□□□ -2.02
SNF8YPL002C RPS30BP0CX34 63 aaKnown RBP2.46□□□□□ -2.02
SNF8YPL002C EDC1P53080 175 aaPredicted RBP2.46□□□□□ -2.02
SNF8YPL002C Q0032Q9ZZX7 96 aa2.46□□□□□ -2.02
SNF8YPL002C HUB1Q6Q546 73 aa2.45□□□□□ -2.02
SNF8YPL002C AQY2P0CD90 149 aa2.44□□□□□ -2.02
SNF8YPL002C YOR034C-AQ3E735 80 aa2.44□□□□□ -2.02
SNF8YPL002C YNL042W-BQ3E7Z2 85 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms