RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W YBR126W-AQ8TGU7 68 aa4.26□□□□□ -1.73
VPS5YOR069W URA2P07259 2214 aaKnown RBP4.26□□□□□ -1.73
VPS5YOR069W YCR041WP37265 110 aa4.26□□□□□ -1.73
VPS5YOR069W YGR240C-AQ3E786 66 aa4.26□□□□□ -1.73
VPS5YOR069W YNL162W-AQ3E7A8 72 aa4.26□□□□□ -1.73
VPS5YOR069W YNL277W-AQ3E7Z0 62 aa4.26□□□□□ -1.73
VPS5YOR069W YOR381W-AQ3E804 55 aa4.25□□□□□ -1.73
VPS5YOR069W YGR121W-AQ3E816 71 aa4.25□□□□□ -1.73
VPS5YOR069W AQY2P0CD90 149 aa4.24□□□□□ -1.73
VPS5YOR069W YCR001WP25347 104 aa4.24□□□□□ -1.73
VPS5YOR069W FYV5P25585 152 aa4.24□□□□□ -1.73
VPS5YOR069W COX23P38824 151 aa4.24□□□□□ -1.73
VPS5YOR069W AIR2Q12476 344 aaKnown RBP4.24□□□□□ -1.73
VPS5YOR069W YBL039W-BP0C268 59 aa4.23□□□□□ -1.73
VPS5YOR069W EDC2P40023 145 aaPredicted RBP4.23□□□□□ -1.73
VPS5YOR069W RPC10P40422 70 aa4.23□□□□□ -1.73
VPS5YOR069W RPS30AP0CX33 63 aaKnown RBP4.22□□□□□ -1.73
VPS5YOR069W RPS30BP0CX34 63 aaKnown RBP4.22□□□□□ -1.73
VPS5YOR069W MLF3P32047 452 aa4.22□□□□□ -1.73
VPS5YOR069W YBR230W-AQ3E762 66 aa4.22□□□□□ -1.73
VPS5YOR069W YHR213W-BQ8TGK1 99 aa4.22□□□□□ -1.73
VPS5YOR069W YJL127C-BQ3E828 52 aa4.22□□□□□ -1.73
VPS5YOR069W YBL081WP38180 368 aaKnown RBP4.21□□□□□ -1.74
VPS5YOR069W YAL064WP39711 94 aa4.21□□□□□ -1.74
VPS5YOR069W MIC10Q96VH5 97 aa4.21□□□□□ -1.74
VPS5YOR069W YHR212W-AP0CX91 67 aa4.21□□□□□ -1.74
VPS5YOR069W YIL102CP40488 101 aa4.21□□□□□ -1.74
VPS5YOR069W RDS3Q06835 107 aaPredicted RBP4.21□□□□□ -1.74
VPS5YOR069W GCN1P33892 2672 aaKnown RBP4.2□□□□□ -1.74
VPS5YOR069W YPR010C-AA5Z2X5 72 aa4.2□□□□□ -1.74
VPS5YOR069W LIP1Q03579 150 aa4.2□□□□□ -1.74
VPS5YOR069W SPT4P32914 102 aaPredicted RBP4.19□□□□□ -1.74
VPS5YOR069W IGD1P43598 195 aa4.19□□□□□ -1.74
VPS5YOR069W YDR274CP87283 123 aa4.19□□□□□ -1.74
VPS5YOR069W YJL133C-AQ3E7A3 74 aa4.19□□□□□ -1.74
VPS5YOR069W YGR035W-AQ45U48 73 aa4.19□□□□□ -1.74
VPS5YOR069W Q0297Q9ZZV8 51 aa4.19□□□□□ -1.74
VPS5YOR069W TOR2P32600 2474 aaKnown RBP4.19□□□□□ -1.74
VPS5YOR069W SPC1P46965 94 aa4.18□□□□□ -1.74
VPS5YOR069W YMR122CQ03879 124 aa4.18□□□□□ -1.74
VPS5YOR069W YKL065W-AQ2V2P2 73 aa4.17□□□□□ -1.74
VPS5YOR069W YAR023CD6VPM8 179 aa4.17□□□□□ -1.74
VPS5YOR069W HHF1P02309 103 aaKnown RBP4.16□□□□□ -1.74
VPS5YOR069W YBR056W-AI2HB52 66 aa4.16□□□□□ -1.74
VPS5YOR069W RPL33AP05744 107 aaKnown RBP4.16□□□□□ -1.74
VPS5YOR069W RPL33BP41056 107 aaKnown RBP4.16□□□□□ -1.74
VPS5YOR069W YNL042W-BQ3E7Z2 85 aa4.16□□□□□ -1.74
VPS5YOR069W YLR307C-AQ3E825 87 aa4.16□□□□□ -1.74
VPS5YOR069W DIF1O13577 133 aa4.14□□□□□ -1.75
VPS5YOR069W OST5Q92316 86 aa4.14□□□□□ -1.75
VPS5YOR069W YER188C-AP0C0V2 99 aa4.14□□□□□ -1.75
VPS5YOR069W PEX22P39718 180 aa4.14□□□□□ -1.75
VPS5YOR069W ECM19Q06011 112 aa4.14□□□□□ -1.75
VPS5YOR069W YER145C-AA0A023PYF4 145 aa4.13□□□□□ -1.75
VPS5YOR069W YOL013W-AP0C272 63 aaPredicted RBP4.13□□□□□ -1.75
VPS5YOR069W RPB9P27999 122 aa4.13□□□□□ -1.75
VPS5YOR069W HOT13P36078 116 aa4.13□□□□□ -1.75
VPS5YOR069W YBR144CP34215 104 aa4.12□□□□□ -1.75
VPS5YOR069W Q0032Q9ZZX7 96 aa4.12□□□□□ -1.75
VPS5YOR069W YEL045CP32616 141 aa4.12□□□□□ -1.75
VPS5YOR069W SAP30P38429 201 aa4.12□□□□□ -1.75
VPS5YOR069W YDR115WQ04598 105 aa4.12□□□□□ -1.75
VPS5YOR069W YPR153WQ06537 140 aa4.12□□□□□ -1.75
VPS5YOR069W SGF11Q03067 99 aa4.11□□□□□ -1.75
VPS5YOR069W YHR007C-AQ07074 71 aa4.09□□□□□ -1.75
VPS5YOR069W MMS2P53152 137 aa4.08□□□□□ -1.76
VPS5YOR069W BSC4P53841 131 aa4.08□□□□□ -1.76
VPS5YOR069W YDR010CQ12426 110 aa4.08□□□□□ -1.76
VPS5YOR069W SNA2P56508 79 aa4.07□□□□□ -1.76
VPS5YOR069W YOR072WQ08486 104 aa4.07□□□□□ -1.76
VPS5YOR069W SDH6Q3E785 79 aa4.07□□□□□ -1.76
VPS5YOR069W DDR2P89113 61 aa4.06□□□□□ -1.76
VPS5YOR069W HUB1Q6Q546 73 aa4.06□□□□□ -1.76
VPS5YOR069W YLL066W-BQ8TGJ7 56 aa4.06□□□□□ -1.76
VPS5YOR069W YBR182C-AQ8TGU6 64 aa4.06□□□□□ -1.76
VPS5YOR069W YLR157W-DP0CE99 70 aa4.05□□□□□ -1.76
VPS5YOR069W YAR064WP39563 99 aa4.05□□□□□ -1.76
VPS5YOR069W YOR376W-AQ3E805 51 aa4.05□□□□□ -1.76
VPS5YOR069W YHR125WP38831 101 aa4.04□□□□□ -1.76
VPS5YOR069W YGL034CP53186 121 aa4.04□□□□□ -1.76
VPS5YOR069W GIS2P53849 153 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
VPS5YOR069W RTC6O14464 93 aa4.04□□□□□ -1.76
VPS5YOR069W YCR095W-AQ3E787 52 aa4.04□□□□□ -1.76
VPS5YOR069W YMR001C-AQ8TGS9 76 aa4.04□□□□□ -1.76
VPS5YOR069W YGL041C-BQ3E750 60 aa4.02□□□□□ -1.77
VPS5YOR069W AUA1P32450 94 aa4.02□□□□□ -1.77
VPS5YOR069W YGL193CP53097 103 aa4.01□□□□□ -1.77
VPS5YOR069W YML100W-AQ8TGT0 57 aa4□□□□□ -1.77
VPS5YOR069W PRP8P33334 2413 aaKnown RBP3.99□□□□□ -1.77
VPS5YOR069W YJL197C-AP0C5P0 93 aa3.99□□□□□ -1.77
VPS5YOR069W YCR043CP25361 127 aa3.99□□□□□ -1.77
VPS5YOR069W YMR230W-AQ3E7B5 62 aa3.98□□□□□ -1.77
VPS5YOR069W YIL156W-BQ2V2P4 73 aa3.97□□□□□ -1.77
VPS5YOR069W TEL1P38110 2787 aa3.96□□□□□ -1.78
VPS5YOR069W YBR027CP38220 110 aa3.96□□□□□ -1.78
VPS5YOR069W RPL43AP0CX25 92 aaKnown RBP3.95□□□□□ -1.78
VPS5YOR069W RPL43BP0CX26 92 aa3.95□□□□□ -1.78
VPS5YOR069W MEC1P38111 2368 aa3.94□□□□□ -1.78
VPS5YOR069W YDL012CQ12489 107 aa3.92□□□□□ -1.78
VPS5YOR069W YFR032C-BQ8TGU2 87 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms