RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YFL065C	P43539	102 aa		2.31	□□□□□ -2.04
TPM1	YNL079C	YPR203W	Q08994	102 aa		2.31	□□□□□ -2.04
TPM1	YNL079C	YLR361C-A	Q3E795	98 aa		2.31	□□□□□ -2.04
TPM1	YNL079C	RPL26A	P05743	127 aa	Known RBP	2.3	□□□□□ -2.04
TPM1	YNL079C	YJR107C-A	P0CT86	78 aa		2.3	□□□□□ -2.04
TPM1	YNL079C	UBC4	P15731	148 aa		2.3	□□□□□ -2.04
TPM1	YNL079C	YCR085W	P25650	117 aa		2.3	□□□□□ -2.04
TPM1	YNL079C	RPL26B	P53221	127 aa	Known RBP	2.3	□□□□□ -2.04
TPM1	YNL079C	RAD6	P06104	172 aa		2.29	□□□□□ -2.04
TPM1	YNL079C	PBI2	P0CT04	75 aa	Known RBP	2.29	□□□□□ -2.04
TPM1	YNL079C	MPC3	P53311	146 aa		2.29	□□□□□ -2.04
TPM1	YNL079C	SNA2	P56508	79 aa		2.29	□□□□□ -2.04
TPM1	YNL079C	YDR381C-A	Q3E6R5	114 aa		2.29	□□□□□ -2.04
TPM1	YNL079C	SKI6	P46948	246 aa	Predicted RBP	2.28	□□□□□ -2.04
TPM1	YNL079C	YGL041C-B	Q3E750	60 aa		2.28	□□□□□ -2.04
TPM1	YNL079C	YBR230W-A	Q3E762	66 aa		2.28	□□□□□ -2.04
TPM1	YNL079C	YLR307C-A	Q3E825	87 aa		2.28	□□□□□ -2.04
TPM1	YNL079C	Q0032	Q9ZZX7	96 aa		2.28	□□□□□ -2.04
TPM1	YNL079C	FYV5	P25585	152 aa		2.27	□□□□□ -2.05
TPM1	YNL079C	ATP18	P81450	59 aa		2.27	□□□□□ -2.05
TPM1	YNL079C	YDR029W	Q12111	104 aa		2.27	□□□□□ -2.05
TPM1	YNL079C	YBL112C	Q3E7Y4	105 aa		2.27	□□□□□ -2.05
TPM1	YNL079C	YJL127C-B	Q3E828	52 aa		2.27	□□□□□ -2.05
TPM1	YNL079C	ECM12	O13529	151 aa		2.26	□□□□□ -2.05
TPM1	YNL079C	RPS28B	P0C0X0	67 aa	Known RBP	2.26	□□□□□ -2.05
TPM1	YNL079C	TSC3	Q3E790	80 aa		2.26	□□□□□ -2.05
TPM1	YNL079C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.26	□□□□□ -2.05
TPM1	YNL079C	YNL042W-B	Q3E7Z2	85 aa		2.26	□□□□□ -2.05
TPM1	YNL079C	YFL041W-A	Q3E817	63 aa		2.26	□□□□□ -2.05
TPM1	YNL079C	YDR034C-A	P0C289	58 aa		2.25	□□□□□ -2.05
TPM1	YNL079C	GAT4	P40569	121 aa		2.25	□□□□□ -2.05
TPM1	YNL079C	SFT1	P43682	97 aa		2.25	□□□□□ -2.05
TPM1	YNL079C	YHR139C-A	O13536	103 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YBR121C-A	P0C5L4	52 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YFR009W-A	P0C5M9	85 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YLR156W	P0CE96	114 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YLR159W	P0CE97	114 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YLR161W	P0CE98	114 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	BET1	P22804	142 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YGL193C	P53097	103 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	RSM19	P53733	91 aa	Predicted RBP	2.24	□□□□□ -2.05
TPM1	YNL079C	EMC6	Q12431	108 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YDR119W-A	Q2V2P9	66 aa		2.24	□□□□□ -2.05
TPM1	YNL079C	YER039C-A	P0CD97	72 aa		2.23	□□□□□ -2.05
TPM1	YNL079C	EDC1	P53080	175 aa	Predicted RBP	2.23	□□□□□ -2.05
TPM1	YNL079C	DDR2	P89113	61 aa		2.23	□□□□□ -2.05
TPM1	YNL079C	TOM6	P33448	61 aa		2.22	□□□□□ -2.05
TPM1	YNL079C	YHL042W	P38729	150 aa		2.22	□□□□□ -2.05
TPM1	YNL079C	YGR039W	P53225	103 aa		2.22	□□□□□ -2.05
TPM1	YNL079C	SHH4	Q06236	168 aa		2.22	□□□□□ -2.05
TPM1	YNL079C	RPL36B	O14455	100 aa	Known RBP	2.21	□□□□□ -2.06
TPM1	YNL079C	YSY6	P38374	65 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	TDA2	P40045	126 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	ICS3	P47034	131 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	RPL38	P49167	78 aa	Known RBP	2.21	□□□□□ -2.06
TPM1	YNL079C	SBH1	P52870	82 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	BSC4	P53841	131 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	YHR007C-A	Q07074	71 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	YOR072W	Q08486	104 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	YPL038W-A	Q3E7B4	63 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	KTI11	Q3E840	82 aa		2.21	□□□□□ -2.06
TPM1	YNL079C	COX23	P38824	151 aa		2.2	□□□□□ -2.06
TPM1	YNL079C	COF1	Q03048	143 aa	Known RBP	2.2	□□□□□ -2.06
TPM1	YNL079C	YLR285C-A	Q3E771	56 aa		2.2	□□□□□ -2.06
TPM1	YNL079C	YHR213W-B	Q8TGK1	99 aa		2.2	□□□□□ -2.06
TPM1	YNL079C	LCL2	Q08045	131 aa		2.19	□□□□□ -2.06
TPM1	YNL079C	YOR268C	Q08734	132 aa		2.19	□□□□□ -2.06
TPM1	YNL079C	YLR412C-A	Q3E742	68 aa		2.19	□□□□□ -2.06
TPM1	YNL079C	TDA8	Q6B2U8	126 aa		2.19	□□□□□ -2.06
TPM1	YNL079C	YHL018W	P38744	120 aa	Predicted RBP	2.18	□□□□□ -2.06
TPM1	YNL079C	RSM18	P40033	138 aa		2.18	□□□□□ -2.06
TPM1	YNL079C	YGR164W	P53291	111 aa		2.18	□□□□□ -2.06
TPM1	YNL079C	LCL1	Q02786	101 aa		2.18	□□□□□ -2.06
TPM1	YNL079C	YOL014W	Q08110	124 aa		2.18	□□□□□ -2.06
TPM1	YNL079C	ATP20	Q12233	115 aa		2.18	□□□□□ -2.06
TPM1	YNL079C	YJL133C-A	Q3E7A3	74 aa		2.18	□□□□□ -2.06
TPM1	YNL079C	YGR121W-A	Q3E816	71 aa		2.18	□□□□□ -2.06
TPM1	YNL079C	SPG1	P50088	95 aa		2.17	□□□□□ -2.06
TPM1	YNL079C	YCR050C	P25630	102 aa		2.16	□□□□□ -2.06
TPM1	YNL079C	YLR162W	Q06235	118 aa		2.16	□□□□□ -2.06
TPM1	YNL079C	YKL183C-A	Q3E765	70 aa		2.16	□□□□□ -2.06
TPM1	YNL079C	MDN1	Q12019	4910 aa	Known RBP	2.15	□□□□□ -2.06
TPM1	YNL079C	YJL197C-A	P0C5P0	93 aa		2.15	□□□□□ -2.07
TPM1	YNL079C	MIC10	Q96VH5	97 aa		2.15	□□□□□ -2.07
TPM1	YNL079C	YBR027C	P38220	110 aa		2.14	□□□□□ -2.07
TPM1	YNL079C	YER187W	P40102	141 aa		2.14	□□□□□ -2.07
TPM1	YNL079C	MMS2	P53152	137 aa		2.14	□□□□□ -2.07
TPM1	YNL079C	YBL008W-A	Q3E821	79 aa		2.14	□□□□□ -2.07
TPM1	YNL079C	YGL034C	P53186	121 aa		2.13	□□□□□ -2.07
TPM1	YNL079C	YOR314W	Q12506	109 aa		2.13	□□□□□ -2.07
TPM1	YNL079C	KSH1	Q8TGJ3	72 aa		2.13	□□□□□ -2.07
TPM1	YNL079C	YDR246W-A	Q3E763	66 aa		2.12	□□□□□ -2.07
TPM1	YNL079C	YNL277W-A	Q3E7Z0	62 aa		2.12	□□□□□ -2.07
TPM1	YNL079C	YLR157W-D	P0CE99	70 aa		2.11	□□□□□ -2.07
TPM1	YNL079C	YOL097W-A	Q3E7Y9	61 aa		2.11	□□□□□ -2.07
TPM1	YNL079C	NOP10	Q6Q547	58 aa	Predicted RBP	2.11	□□□□□ -2.07
TPM1	YNL079C	DDR48	P18899	430 aa	Known RBP	2.1	□□□□□ -2.07
TPM1	YNL079C	AIM4	P38305	123 aa	Predicted RBP	2.1	□□□□□ -2.07
TPM1	YNL079C	YAR064W	P39563	99 aa		2.1	□□□□□ -2.07
TPM1	YNL079C	YGL149W	P53116	101 aa		2.1	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms