RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C IMP2P46972 177 aa0.35□□□□□ -2.35
RKR1YMR247C YKL065W-AQ2V2P2 73 aa0.35□□□□□ -2.35
RKR1YMR247C OST5Q92316 86 aa0.35□□□□□ -2.35
RKR1YMR247C YHR214C-DP0CX93 97 aa0.35□□□□□ -2.35
RKR1YMR247C YIL102C-AQ2V2P5 75 aa0.35□□□□□ -2.35
RKR1YMR247C YKL018C-AQ3E7A7 99 aa0.35□□□□□ -2.35
RKR1YMR247C URA2P07259 2214 aaKnown RBP0.35□□□□□ -2.35
RKR1YMR247C RPL38P49167 78 aaKnown RBP0.34□□□□□ -2.35
RKR1YMR247C MRPS12P53732 153 aa0.34□□□□□ -2.35
RKR1YMR247C LSM6Q06406 86 aaKnown RBP0.34□□□□□ -2.35
RKR1YMR247C YOL164W-AQ3E7A5 60 aa0.34□□□□□ -2.35
RKR1YMR247C GCV3P39726 170 aaPredicted RBP0.34□□□□□ -2.35
RKR1YMR247C MHF2Q3E829 80 aa0.34□□□□□ -2.35
RKR1YMR247C IRA1P18963 3092 aa0.34□□□□□ -2.36
RKR1YMR247C YDL022C-AP0C5L6 82 aa0.34□□□□□ -2.36
RKR1YMR247C TIM12P32830 109 aa0.34□□□□□ -2.36
RKR1YMR247C COX23P38824 151 aa0.34□□□□□ -2.36
RKR1YMR247C YOR304C-AO14468 76 aa0.33□□□□□ -2.36
RKR1YMR247C YLR285C-AQ3E771 56 aa0.33□□□□□ -2.36
RKR1YMR247C IRA2P19158 3079 aa0.33□□□□□ -2.36
RKR1YMR247C PAU1P0CE88 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU14P0CE89 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU6P0CE90 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU18P0CE91 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU8P0CE92 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU11P0CE93 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU2P32612 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU24P38155 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU13P38725 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU12P53343 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU10Q03050 120 aa0.33□□□□□ -2.36
RKR1YMR247C PAU9Q3E770 120 aa0.33□□□□□ -2.36
RKR1YMR247C MRPL38P35996 138 aaPredicted RBP0.33□□□□□ -2.36
RKR1YMR247C SHU1P38751 150 aa0.33□□□□□ -2.36
RKR1YMR247C PAM16P42949 149 aa0.33□□□□□ -2.36
RKR1YMR247C WIP1Q2V2P8 89 aa0.33□□□□□ -2.36
RKR1YMR247C RPS11AP0CX47 156 aaKnown RBP0.32□□□□□ -2.36
RKR1YMR247C RPS11BP0CX48 156 aaKnown RBP0.32□□□□□ -2.36
RKR1YMR247C YIL086CP40503 102 aa0.32□□□□□ -2.36
RKR1YMR247C TOS6P48560 102 aa0.32□□□□□ -2.36
RKR1YMR247C YBR292CP38357 123 aa0.32□□□□□ -2.36
RKR1YMR247C ICY1Q04329 127 aa0.32□□□□□ -2.36
RKR1YMR247C MIC10Q96VH5 97 aa0.32□□□□□ -2.36
RKR1YMR247C MPC2P38857 129 aa0.32□□□□□ -2.36
RKR1YMR247C YJR107C-AP0CT86 78 aa0.32□□□□□ -2.36
RKR1YMR247C PAU4P53427 120 aa0.32□□□□□ -2.36
RKR1YMR247C AIM4P38305 123 aaPredicted RBP0.31□□□□□ -2.36
RKR1YMR247C SUS1Q6WNK7 96 aa0.31□□□□□ -2.36
RKR1YMR247C YHR130CP38834 111 aa0.31□□□□□ -2.36
RKR1YMR247C YLR365WQ7LIF2 110 aa0.31□□□□□ -2.36
RKR1YMR247C COX9P07255 59 aa0.31□□□□□ -2.36
RKR1YMR247C MRX7P53869 86 aa0.31□□□□□ -2.36
RKR1YMR247C YOL131WQ08270 108 aa0.31□□□□□ -2.36
RKR1YMR247C YGL194C-AQ2V2P6 80 aa0.31□□□□□ -2.36
RKR1YMR247C BRR2P32639 2163 aaKnown RBP0.31□□□□□ -2.36
RKR1YMR247C HMRA1P0CY11 126 aa0.3□□□□□ -2.36
RKR1YMR247C PAU5P43575 122 aa0.3□□□□□ -2.36
RKR1YMR247C EDC1P53080 175 aaPredicted RBP0.3□□□□□ -2.36
RKR1YMR247C YNL190WP53872 204 aa0.3□□□□□ -2.36
RKR1YMR247C YCR095W-AQ3E787 52 aa0.3□□□□□ -2.36
RKR1YMR247C PAI3P01094 68 aa0.3□□□□□ -2.36
RKR1YMR247C POL2P21951 2222 aaKnown RBP0.3□□□□□ -2.36
RKR1YMR247C YLR042CQ07990 161 aa0.29□□□□□ -2.36
RKR1YMR247C COX7P10174 60 aa0.29□□□□□ -2.36
RKR1YMR247C ZEO1Q08245 113 aa0.29□□□□□ -2.36
RKR1YMR247C FPR2P32472 135 aa0.29□□□□□ -2.36
RKR1YMR247C YAR029WP39549 74 aa0.29□□□□□ -2.36
RKR1YMR247C LCL1Q02786 101 aa0.29□□□□□ -2.36
RKR1YMR247C RRT15Q3E811 62 aa0.29□□□□□ -2.36
RKR1YMR247C COA2Q3E823 68 aa0.28□□□□□ -2.36
RKR1YMR247C RSM18P40033 138 aa0.28□□□□□ -2.36
RKR1YMR247C SDH6Q3E785 79 aa0.28□□□□□ -2.36
RKR1YMR247C YFR009W-AP0C5M9 85 aa0.28□□□□□ -2.36
RKR1YMR247C BSC4P53841 131 aa0.28□□□□□ -2.37
RKR1YMR247C ERI1P62651 68 aaKnown RBP0.28□□□□□ -2.37
RKR1YMR247C SEN1Q00416 2231 aaKnown RBP0.27□□□□□ -2.37
RKR1YMR247C YGR025WP53216 100 aa0.27□□□□□ -2.37
RKR1YMR247C YOL097W-AQ3E7Y9 61 aa0.27□□□□□ -2.37
RKR1YMR247C YOR011W-AQ3E807 68 aa0.27□□□□□ -2.37
RKR1YMR247C QCR9P22289 66 aa0.26□□□□□ -2.37
RKR1YMR247C YLR255CO13574 117 aa0.26□□□□□ -2.37
RKR1YMR247C OLI1P61829 76 aa0.26□□□□□ -2.37
RKR1YMR247C SSS1P35179 80 aa0.26□□□□□ -2.37
RKR1YMR247C ATP17Q06405 101 aa0.26□□□□□ -2.37
RKR1YMR247C RPS27BP38711 82 aa0.25□□□□□ -2.37
RKR1YMR247C RPC10P40422 70 aa0.25□□□□□ -2.37
RKR1YMR247C YOR008C-AQ3E7B9 74 aa0.25□□□□□ -2.37
RKR1YMR247C SEC16P48415 2195 aaKnown RBP0.25□□□□□ -2.37
RKR1YMR247C LSM2P38203 95 aaKnown RBP0.25□□□□□ -2.37
RKR1YMR247C YSY6P38374 65 aa0.25□□□□□ -2.37
RKR1YMR247C YOR376W-AQ3E805 51 aa0.25□□□□□ -2.37
RKR1YMR247C AUA1P32450 94 aa0.24□□□□□ -2.37
RKR1YMR247C YBR016WP38216 128 aa0.24□□□□□ -2.37
RKR1YMR247C YNL042W-BQ3E7Z2 85 aa0.24□□□□□ -2.37
RKR1YMR247C YMR001C-AQ8TGS9 76 aa0.24□□□□□ -2.37
RKR1YMR247C Q0032Q9ZZX7 96 aa0.24□□□□□ -2.37
RKR1YMR247C YBL071CP38185 102 aa0.24□□□□□ -2.37
RKR1YMR247C RPL29P05747 59 aaPredicted RBP0.24□□□□□ -2.37
RKR1YMR247C RPS27AP35997 82 aaKnown RBP0.24□□□□□ -2.37
RKR1YMR247C YOR105WQ08504 108 aa0.24□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms