RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W FRQ1Q06389 190 aa-0.54□□□□□ -2.5
PRP39YML046W NAT5Q08689 176 aa-0.54□□□□□ -2.5
PRP39YML046W YLR342W-AQ3E810 57 aa-0.54□□□□□ -2.5
PRP39YML046W YJL127C-BQ3E828 52 aa-0.54□□□□□ -2.5
PRP39YML046W HTB2P02294 131 aa-0.55□□□□□ -2.5
PRP39YML046W LSM2P38203 95 aaKnown RBP-0.55□□□□□ -2.5
PRP39YML046W ATP19P81451 68 aa-0.55□□□□□ -2.5
PRP39YML046W TLG1Q03322 224 aa-0.55□□□□□ -2.5
PRP39YML046W PKR1Q03880 122 aaKnown RBP-0.55□□□□□ -2.5
PRP39YML046W SOM1Q05676 74 aa-0.55□□□□□ -2.5
PRP39YML046W YDR119W-AQ2V2P9 66 aa-0.55□□□□□ -2.5
PRP39YML046W YBR230W-AQ3E762 66 aa-0.55□□□□□ -2.5
PRP39YML046W YDL085C-AQ3E7B7 68 aaKnown RBP-0.55□□□□□ -2.5
PRP39YML046W ATP5P09457 212 aa-0.56□□□□□ -2.5
PRP39YML046W RPS30AP0CX33 63 aaKnown RBP-0.56□□□□□ -2.5
PRP39YML046W RPS30BP0CX34 63 aaKnown RBP-0.56□□□□□ -2.5
PRP39YML046W PAU2P32612 120 aa-0.56□□□□□ -2.5
PRP39YML046W YKL044WP36092 106 aa-0.56□□□□□ -2.5
PRP39YML046W NVJ1P38881 321 aa-0.56□□□□□ -2.5
PRP39YML046W TVP18Q04767 167 aa-0.56□□□□□ -2.5
PRP39YML046W YIL156W-BQ2V2P4 73 aa-0.56□□□□□ -2.5
PRP39YML046W QCR7P00128 127 aa-0.56□□□□□ -2.5
PRP39YML046W UBI4P0CG63 381 aaKnown RBP-0.56□□□□□ -2.5
PRP39YML046W YJR107C-AP0CT86 78 aa-0.56□□□□□ -2.5
PRP39YML046W YKT6P36015 200 aaKnown RBP-0.56□□□□□ -2.5
PRP39YML046W TMA20P89886 181 aaPredicted RBP-0.56□□□□□ -2.5
PRP39YML046W YPL261CQ08976 102 aa-0.56□□□□□ -2.5
PRP39YML046W COA2Q3E823 68 aa-0.56□□□□□ -2.5
PRP39YML046W RPL36AP05745 100 aaPredicted RBP-0.57□□□□□ -2.5
PRP39YML046W CMD1P06787 147 aaKnown RBP-0.57□□□□□ -2.5
PRP39YML046W PAU1P0CE88 120 aa-0.57□□□□□ -2.5
PRP39YML046W PAU14P0CE89 120 aa-0.57□□□□□ -2.5
PRP39YML046W PAU8P0CE92 120 aa-0.57□□□□□ -2.5
PRP39YML046W PAU11P0CE93 120 aa-0.57□□□□□ -2.5
PRP39YML046W MRPL44P19956 98 aa-0.57□□□□□ -2.5
PRP39YML046W PAU24P38155 120 aa-0.57□□□□□ -2.5
PRP39YML046W EGD2P38879 174 aaKnown RBP-0.57□□□□□ -2.5
PRP39YML046W CYB5P40312 120 aa-0.57□□□□□ -2.5
PRP39YML046W YGL204CP53089 101 aa-0.57□□□□□ -2.5
PRP39YML046W PAU12P53343 120 aa-0.57□□□□□ -2.5
PRP39YML046W NSL1Q12143 216 aa-0.57□□□□□ -2.5
PRP39YML046W PAU9Q3E770 120 aa-0.57□□□□□ -2.5
PRP39YML046W YLR285C-AQ3E771 56 aa-0.57□□□□□ -2.5
PRP39YML046W YMR001C-AQ8TGS9 76 aa-0.57□□□□□ -2.5
PRP39YML046W RPS28BP0C0X0 67 aaKnown RBP-0.58□□□□□ -2.5
PRP39YML046W HMRA2P0CY13 119 aa-0.58□□□□□ -2.5
PRP39YML046W HSP12P22943 109 aaKnown RBP-0.58□□□□□ -2.5
PRP39YML046W QCR10P37299 77 aa-0.58□□□□□ -2.5
PRP39YML046W AME1P38313 324 aa-0.58□□□□□ -2.5
PRP39YML046W HSP10P38910 106 aa-0.58□□□□□ -2.5
PRP39YML046W YER181CP40097 107 aa-0.58□□□□□ -2.5
PRP39YML046W MSS2P40990 351 aa-0.58□□□□□ -2.5
PRP39YML046W JAC1P53193 184 aa-0.58□□□□□ -2.5
PRP39YML046W COX19Q3E731 98 aa-0.58□□□□□ -2.5
PRP39YML046W SFT1P43682 97 aa-0.58□□□□□ -2.5
PRP39YML046W LSM1P47017 172 aaKnown RBP-0.58□□□□□ -2.5
PRP39YML046W YIL014C-AQ02598 104 aa-0.58□□□□□ -2.5
PRP39YML046W YKL018C-AQ3E7A7 99 aa-0.58□□□□□ -2.5
PRP39YML046W RPS28AQ3E7X9 67 aaPredicted RBP-0.58□□□□□ -2.5
PRP39YML046W SHG1P38337 142 aa-0.59□□□□□ -2.5
PRP39YML046W SMX2P40204 77 aaKnown RBP-0.59□□□□□ -2.5
PRP39YML046W LSM8P47093 109 aaKnown RBP-0.59□□□□□ -2.5
PRP39YML046W RPL38P49167 78 aaKnown RBP-0.59□□□□□ -2.5
PRP39YML046W MRPS17Q03246 237 aaPredicted RBP-0.59□□□□□ -2.5
PRP39YML046W PAU23Q07987 124 aa-0.59□□□□□ -2.5
PRP39YML046W POC4Q12245 148 aaPredicted RBP-0.59□□□□□ -2.5
PRP39YML046W COX9P07255 59 aa-0.6□□□□□ -2.51
PRP39YML046W NHP2P32495 156 aaPredicted RBP-0.6□□□□□ -2.51
PRP39YML046W OLI1P61829 76 aa-0.6□□□□□ -2.51
PRP39YML046W YOR394C-AQ8TGJ0 55 aa-0.6□□□□□ -2.51
PRP39YML046W RPL22BP56628 122 aaKnown RBP-0.61□□□□□ -2.51
PRP39YML046W PAU10Q03050 120 aa-0.61□□□□□ -2.51
PRP39YML046W ICY1Q04329 127 aa-0.61□□□□□ -2.51
PRP39YML046W YLR050CQ12155 161 aaKnown RBP-0.61□□□□□ -2.51
PRP39YML046W YLR363W-AQ3E747 85 aa-0.61□□□□□ -2.51
PRP39YML046W YPL038W-AQ3E7B4 63 aa-0.61□□□□□ -2.51
PRP39YML046W YLL006W-AQ3E814 58 aa-0.61□□□□□ -2.51
PRP39YML046W YKL068W-AQ3E826 78 aa-0.61□□□□□ -2.51
PRP39YML046W MIC10Q96VH5 97 aa-0.61□□□□□ -2.51
PRP39YML046W YCR050CP25630 102 aa-0.61□□□□□ -2.51
PRP39YML046W MRX7P53869 86 aa-0.61□□□□□ -2.51
PRP39YML046W SLO1Q3E784 85 aa-0.61□□□□□ -2.51
PRP39YML046W MRP17P28778 131 aa-0.62□□□□□ -2.51
PRP39YML046W SWM2P40342 146 aa-0.62□□□□□ -2.51
PRP39YML046W ERV14P53173 138 aa-0.62□□□□□ -2.51
PRP39YML046W CNL1Q06333 122 aa-0.62□□□□□ -2.51
PRP39YML046W ACP1P32463 125 aa-0.63□□□□□ -2.51
PRP39YML046W YBR292CP38357 123 aa-0.63□□□□□ -2.51
PRP39YML046W GTT1P40582 234 aa-0.63□□□□□ -2.51
PRP39YML046W PAU5P43575 122 aa-0.63□□□□□ -2.51
PRP39YML046W RSM19P53733 91 aaPredicted RBP-0.63□□□□□ -2.51
PRP39YML046W MAK3Q03503 176 aa-0.63□□□□□ -2.51
PRP39YML046W LSM6Q06406 86 aaKnown RBP-0.63□□□□□ -2.51
PRP39YML046W OST5Q92316 86 aa-0.63□□□□□ -2.51
PRP39YML046W YHR130CP38834 111 aa-0.63□□□□□ -2.51
PRP39YML046W TDA2P40045 126 aa-0.63□□□□□ -2.51
PRP39YML046W GIM3P53900 129 aa-0.63□□□□□ -2.51
PRP39YML046W GPI19Q04082 140 aa-0.63□□□□□ -2.51
PRP39YML046W YIR021W-AQ3E739 70 aa-0.63□□□□□ -2.51
PRP39YML046W PAU6P0CE90 120 aa-0.64□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 325.2 ms