RNA–Protein interactions for RNA: YLR398C

SKI2, Transcript of Ski complex component and putative RNA helicase, yeastyeast

Gene SKI2, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI2YLR398C YJL127C-BQ3E828 52 aa4.69□□□□□ -1.66
SKI2YLR398C YLR157W-DP0CE99 70 aa4.68□□□□□ -1.66
SKI2YLR398C MVB12P42939 101 aa4.68□□□□□ -1.66
SKI2YLR398C YMR122CQ03879 124 aa4.68□□□□□ -1.66
SKI2YLR398C RPS28BP0C0X0 67 aaKnown RBP4.67□□□□□ -1.66
SKI2YLR398C RPS28AQ3E7X9 67 aaPredicted RBP4.67□□□□□ -1.66
SKI2YLR398C HUB1Q6Q546 73 aa4.67□□□□□ -1.66
SKI2YLR398C RPR2P40571 144 aa4.66□□□□□ -1.66
SKI2YLR398C YGL149WP53116 101 aa4.66□□□□□ -1.66
SKI2YLR398C YGL034CP53186 121 aa4.66□□□□□ -1.66
SKI2YLR398C YHR213W-BQ8TGK1 99 aa4.65□□□□□ -1.67
SKI2YLR398C YDR274CP87283 123 aa4.64□□□□□ -1.67
SKI2YLR398C AIR2Q12476 344 aaKnown RBP4.64□□□□□ -1.67
SKI2YLR398C YJL133C-AQ3E7A3 74 aa4.64□□□□□ -1.67
SKI2YLR398C COX14P39103 70 aa4.64□□□□□ -1.67
SKI2YLR398C YHR007C-AQ07074 71 aa4.64□□□□□ -1.67
SKI2YLR398C SHH4Q06236 168 aa4.63□□□□□ -1.67
SKI2YLR398C BSC4P53841 131 aa4.63□□□□□ -1.67
SKI2YLR398C YMR244WQ04018 355 aa4.63□□□□□ -1.67
SKI2YLR398C SPT4P32914 102 aaPredicted RBP4.62□□□□□ -1.67
SKI2YLR398C SPO24Q3E752 67 aa4.62□□□□□ -1.67
SKI2YLR398C YAL065CO13511 128 aa4.61□□□□□ -1.67
SKI2YLR398C YMR122W-AQ3E842 84 aa4.61□□□□□ -1.67
SKI2YLR398C HOR7Q05827 59 aa4.61□□□□□ -1.67
SKI2YLR398C YGL015CP33199 130 aa4.61□□□□□ -1.67
SKI2YLR398C SDH6Q3E785 79 aa4.6□□□□□ -1.67
SKI2YLR398C YNL146C-AQ3E7Z1 64 aa4.6□□□□□ -1.67
SKI2YLR398C FYV5P25585 152 aa4.6□□□□□ -1.67
SKI2YLR398C YLR412C-AQ3E742 68 aa4.6□□□□□ -1.67
SKI2YLR398C YFR009W-AP0C5M9 85 aa4.59□□□□□ -1.67
SKI2YLR398C SGF11Q03067 99 aa4.59□□□□□ -1.67
SKI2YLR398C YBR219CP38317 127 aa4.59□□□□□ -1.67
SKI2YLR398C DDR2P89113 61 aa4.59□□□□□ -1.67
SKI2YLR398C MRPS8Q03799 155 aa4.59□□□□□ -1.67
SKI2YLR398C IRA1P18963 3092 aa4.59□□□□□ -1.67
SKI2YLR398C RPL36BO14455 100 aaKnown RBP4.59□□□□□ -1.68
SKI2YLR398C YPR010C-AA5Z2X5 72 aa4.58□□□□□ -1.68
SKI2YLR398C RPL36AP05745 100 aaPredicted RBP4.58□□□□□ -1.68
SKI2YLR398C YBL039W-BP0C268 59 aa4.58□□□□□ -1.68
SKI2YLR398C YBR144CP34215 104 aa4.58□□□□□ -1.68
SKI2YLR398C YLR236CA0A023PZG4 107 aa4.57□□□□□ -1.68
SKI2YLR398C YOL014WQ08110 124 aa4.55□□□□□ -1.68
SKI2YLR398C NUM1Q00402 2748 aa4.54□□□□□ -1.68
SKI2YLR398C YCR043CP25361 127 aa4.54□□□□□ -1.68
SKI2YLR398C YER188C-AP0C0V2 99 aa4.54□□□□□ -1.68
SKI2YLR398C YMR175W-AQ3E766 64 aa4.53□□□□□ -1.68
SKI2YLR398C YMR001C-AQ8TGS9 76 aa4.53□□□□□ -1.68
SKI2YLR398C YHR212W-AP0CX91 67 aa4.52□□□□□ -1.69
SKI2YLR398C TDA8Q6B2U8 126 aa4.52□□□□□ -1.69
SKI2YLR398C YBR126W-AQ8TGU7 68 aa4.52□□□□□ -1.69
SKI2YLR398C CSF1Q12150 2958 aa4.52□□□□□ -1.69
SKI2YLR398C YLR162WQ06235 118 aa4.5□□□□□ -1.69
SKI2YLR398C RPB9P27999 122 aa4.5□□□□□ -1.69
SKI2YLR398C YIL156W-BQ2V2P4 73 aa4.49□□□□□ -1.69
SKI2YLR398C TAR1Q8TGM6 124 aa4.49□□□□□ -1.69
SKI2YLR398C YAR064WP39563 99 aa4.49□□□□□ -1.69
SKI2YLR398C YOR072WQ08486 104 aa4.49□□□□□ -1.69
SKI2YLR398C YBR230W-AQ3E762 66 aa4.49□□□□□ -1.69
SKI2YLR398C YKL065W-AQ2V2P2 73 aa4.48□□□□□ -1.69
SKI2YLR398C YNL042W-BQ3E7Z2 85 aa4.48□□□□□ -1.69
SKI2YLR398C YPL278CQ08990 100 aa4.48□□□□□ -1.69
SKI2YLR398C YFR032C-BQ8TGU2 87 aa4.47□□□□□ -1.69
SKI2YLR398C YGL193CP53097 103 aa4.47□□□□□ -1.69
SKI2YLR398C YGL041C-BQ3E750 60 aa4.47□□□□□ -1.69
SKI2YLR398C YBR201C-AQ2V2Q3 67 aa4.47□□□□□ -1.69
SKI2YLR398C YML100W-AQ8TGT0 57 aa4.47□□□□□ -1.69
SKI2YLR398C YGR164WP53291 111 aa4.46□□□□□ -1.7
SKI2YLR398C YBR182C-AQ8TGU6 64 aa4.46□□□□□ -1.7
SKI2YLR398C YEL014CP39999 101 aa4.46□□□□□ -1.7
SKI2YLR398C COX23P38824 151 aa4.45□□□□□ -1.7
SKI2YLR398C ECM19Q06011 112 aa4.45□□□□□ -1.7
SKI2YLR398C YMR230W-AQ3E7B5 62 aa4.45□□□□□ -1.7
SKI2YLR398C YNL122CP53921 115 aaPredicted RBP4.44□□□□□ -1.7
SKI2YLR398C YOL013W-AP0C272 63 aaPredicted RBP4.44□□□□□ -1.7
SKI2YLR398C YDR246W-AQ3E763 66 aa4.42□□□□□ -1.7
SKI2YLR398C YDR182W-AQ3E796 67 aa4.42□□□□□ -1.7
SKI2YLR398C GAT4P40569 121 aa4.41□□□□□ -1.7
SKI2YLR398C RPL33BP41056 107 aaKnown RBP4.41□□□□□ -1.7
SKI2YLR398C YGR240C-AQ3E786 66 aa4.4□□□□□ -1.7
SKI2YLR398C LCL2Q08045 131 aa4.4□□□□□ -1.71
SKI2YLR398C YNL162W-AQ3E7A8 72 aa4.4□□□□□ -1.71
SKI2YLR398C YGR121W-AQ3E816 71 aa4.39□□□□□ -1.71
SKI2YLR398C YGR035W-AQ45U48 73 aa4.39□□□□□ -1.71
SKI2YLR398C YER145C-AA0A023PYF4 145 aa4.39□□□□□ -1.71
SKI2YLR398C YBL044WP38194 122 aa4.39□□□□□ -1.71
SKI2YLR398C YHL037CP38733 133 aa4.39□□□□□ -1.71
SKI2YLR398C QCR10P37299 77 aa4.38□□□□□ -1.71
SKI2YLR398C RPC10P40422 70 aa4.38□□□□□ -1.71
SKI2YLR398C IGD1P43598 195 aa4.38□□□□□ -1.71
SKI2YLR398C YOL166W-AQ8TGJ1 51 aa4.38□□□□□ -1.71
SKI2YLR398C RTC6O14464 93 aa4.37□□□□□ -1.71
SKI2YLR398C SPG1P50088 95 aa4.37□□□□□ -1.71
SKI2YLR398C YPR195CQ06594 109 aa4.37□□□□□ -1.71
SKI2YLR398C AUA1P32450 94 aa4.36□□□□□ -1.71
SKI2YLR398C YCL042WP25572 119 aa4.36□□□□□ -1.71
SKI2YLR398C YHR125WP38831 101 aa4.36□□□□□ -1.71
SKI2YLR398C YDR034C-AP0C289 58 aa4.35□□□□□ -1.71
SKI2YLR398C YBR027CP38220 110 aa4.35□□□□□ -1.71
SKI2YLR398C YLR122CQ12312 125 aa4.34□□□□□ -1.72
SKI2YLR398C COX8P04039 78 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms