RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YMR122W-AQ3E842 84 aa1.71□□□□□ -2.14
CSF1YLR087C FPR1P20081 114 aaKnown RBP1.7□□□□□ -2.14
CSF1YLR087C RPB10P22139 70 aa1.7□□□□□ -2.14
CSF1YLR087C PMP3P87284 55 aa1.7□□□□□ -2.14
CSF1YLR087C MIM1Q08176 113 aa1.7□□□□□ -2.14
CSF1YLR087C SNA2P56508 79 aa1.7□□□□□ -2.14
CSF1YLR087C RPS21BQ3E754 87 aaKnown RBP1.7□□□□□ -2.14
CSF1YLR087C YGR240C-AQ3E786 66 aa1.7□□□□□ -2.14
CSF1YLR087C YDR274CP87283 123 aa1.69□□□□□ -2.14
CSF1YLR087C SEN15Q04675 128 aa1.69□□□□□ -2.14
CSF1YLR087C RPS23AP0CX29 145 aaKnown RBP1.69□□□□□ -2.14
CSF1YLR087C RPS23BP0CX30 145 aa1.69□□□□□ -2.14
CSF1YLR087C YMR122CQ03879 124 aa1.69□□□□□ -2.14
CSF1YLR087C SOM1Q05676 74 aa1.69□□□□□ -2.14
CSF1YLR087C YNL146C-AQ3E7Z1 64 aa1.69□□□□□ -2.14
CSF1YLR087C YCR025CP25352 136 aa1.69□□□□□ -2.14
CSF1YLR087C ATP18P81450 59 aa1.69□□□□□ -2.14
CSF1YLR087C YBR027CP38220 110 aa1.69□□□□□ -2.14
CSF1YLR087C YDR246W-AQ3E763 66 aa1.68□□□□□ -2.14
CSF1YLR087C RPL15AP05748 204 aaKnown RBP1.68□□□□□ -2.14
CSF1YLR087C RPL15BP54780 204 aaPredicted RBP1.68□□□□□ -2.14
CSF1YLR087C FIT2Q08906 153 aa1.68□□□□□ -2.14
CSF1YLR087C SDH6Q3E785 79 aa1.68□□□□□ -2.14
CSF1YLR087C YHR214C-EQ8TGK0 99 aa1.68□□□□□ -2.14
CSF1YLR087C YBR219CP38317 127 aa1.68□□□□□ -2.14
CSF1YLR087C YJR146WP47174 117 aa1.68□□□□□ -2.14
CSF1YLR087C NCE101Q02820 53 aa1.68□□□□□ -2.14
CSF1YLR087C YOR316C-AQ3E806 69 aa1.68□□□□□ -2.14
CSF1YLR087C RPL33BP41056 107 aaKnown RBP1.67□□□□□ -2.14
CSF1YLR087C SPC1P46965 94 aa1.67□□□□□ -2.14
CSF1YLR087C YIL086CP40503 102 aa1.67□□□□□ -2.14
CSF1YLR087C YLR255CO13574 117 aa1.67□□□□□ -2.14
CSF1YLR087C RTC6O14464 93 aa1.67□□□□□ -2.14
CSF1YLR087C YGR035W-AQ45U48 73 aa1.67□□□□□ -2.14
CSF1YLR087C COX8P04039 78 aa1.66□□□□□ -2.14
CSF1YLR087C YSF3P0C074 85 aaPredicted RBP1.66□□□□□ -2.14
CSF1YLR087C RPS21AP0C0V8 87 aaKnown RBP1.66□□□□□ -2.14
CSF1YLR087C YCR095W-AQ3E787 52 aa1.66□□□□□ -2.14
CSF1YLR087C SHU1P38751 150 aa1.66□□□□□ -2.14
CSF1YLR087C YHR125WP38831 101 aa1.65□□□□□ -2.14
CSF1YLR087C YMR001C-AQ8TGS9 76 aa1.65□□□□□ -2.14
CSF1YLR087C YLR285C-AQ3E771 56 aa1.65□□□□□ -2.14
CSF1YLR087C YNL042W-BQ3E7Z2 85 aa1.65□□□□□ -2.14
CSF1YLR087C YPR053CQ6Q5F3 151 aa1.65□□□□□ -2.14
CSF1YLR087C RPL38P49167 78 aaKnown RBP1.65□□□□□ -2.14
CSF1YLR087C YMR007WQ03675 126 aa1.65□□□□□ -2.15
CSF1YLR087C YHR073W-AP0C5N7 58 aa1.65□□□□□ -2.15
CSF1YLR087C YGR121W-AQ3E816 71 aa1.65□□□□□ -2.15
CSF1YLR087C YBL039W-BP0C268 59 aa1.65□□□□□ -2.15
CSF1YLR087C YLR156WP0CE96 114 aa1.65□□□□□ -2.15
CSF1YLR087C YLR159WP0CE97 114 aa1.65□□□□□ -2.15
CSF1YLR087C YLR161WP0CE98 114 aa1.65□□□□□ -2.15
CSF1YLR087C YEL008WP40001 126 aa1.65□□□□□ -2.15
CSF1YLR087C MIC10Q96VH5 97 aa1.65□□□□□ -2.15
CSF1YLR087C LEE1Q02799 301 aaKnown RBP1.64□□□□□ -2.15
CSF1YLR087C YBR072C-AQ3E794 53 aa1.64□□□□□ -2.15
CSF1YLR087C YOL166W-AQ8TGJ1 51 aa1.64□□□□□ -2.15
CSF1YLR087C YEL045CP32616 141 aa1.64□□□□□ -2.15
CSF1YLR087C YNL122CP53921 115 aaPredicted RBP1.64□□□□□ -2.15
CSF1YLR087C YEL014CP39999 101 aa1.64□□□□□ -2.15
CSF1YLR087C AGA2P32781 87 aa1.63□□□□□ -2.15
CSF1YLR087C YCR022CP25620 114 aa1.63□□□□□ -2.15
CSF1YLR087C Q0032Q9ZZX7 96 aa1.63□□□□□ -2.15
CSF1YLR087C RPC10P40422 70 aa1.62□□□□□ -2.15
CSF1YLR087C NUM1Q00402 2748 aa1.62□□□□□ -2.15
CSF1YLR087C YOR381W-AQ3E804 55 aa1.62□□□□□ -2.15
CSF1YLR087C HSK3P69852 69 aa1.61□□□□□ -2.15
CSF1YLR087C YOL013W-AP0C272 63 aaPredicted RBP1.61□□□□□ -2.15
CSF1YLR087C HUG1Q6Q5K6 68 aa1.61□□□□□ -2.15
CSF1YLR087C YIR020CP40575 100 aa1.61□□□□□ -2.15
CSF1YLR087C MRPS12P53732 153 aa1.61□□□□□ -2.15
CSF1YLR087C YOR268CQ08734 132 aa1.6□□□□□ -2.15
CSF1YLR087C YBR200W-AQ3E755 54 aa1.6□□□□□ -2.15
CSF1YLR087C SIP18P50263 79 aa1.6□□□□□ -2.15
CSF1YLR087C DAD4P69851 72 aa1.6□□□□□ -2.15
CSF1YLR087C YIL102CP40488 101 aa1.6□□□□□ -2.15
CSF1YLR087C RPL33AP05744 107 aaKnown RBP1.6□□□□□ -2.15
CSF1YLR087C MRPL38P35996 138 aaPredicted RBP1.6□□□□□ -2.15
CSF1YLR087C YGL014C-AP0C5N1 53 aa1.59□□□□□ -2.15
CSF1YLR087C YER145C-AA0A023PYF4 145 aa1.59□□□□□ -2.15
CSF1YLR087C YFR032C-BQ8TGU2 87 aa1.59□□□□□ -2.15
CSF1YLR087C YAR064WP39563 99 aa1.59□□□□□ -2.16
CSF1YLR087C YNL162W-AQ3E7A8 72 aa1.59□□□□□ -2.16
CSF1YLR087C YHR213W-BQ8TGK1 99 aa1.58□□□□□ -2.16
CSF1YLR087C YFR009W-AP0C5M9 85 aa1.58□□□□□ -2.16
CSF1YLR087C MRP10O75012 95 aa1.58□□□□□ -2.16
CSF1YLR087C YJL027CP47063 138 aaPredicted RBP1.58□□□□□ -2.16
CSF1YLR087C YLR157W-DP0CE99 70 aa1.58□□□□□ -2.16
CSF1YLR087C YHR032W-AP0C5N6 59 aa1.57□□□□□ -2.16
CSF1YLR087C NOP10Q6Q547 58 aaPredicted RBP1.57□□□□□ -2.16
CSF1YLR087C YBL081WP38180 368 aaKnown RBP1.57□□□□□ -2.16
CSF1YLR087C YGR146C-AQ8TGT9 53 aa1.57□□□□□ -2.16
CSF1YLR087C MVB12P42939 101 aa1.56□□□□□ -2.16
CSF1YLR087C YOR394C-AQ8TGJ0 55 aa1.56□□□□□ -2.16
CSF1YLR087C YJR085CP47131 105 aaKnown RBP1.56□□□□□ -2.16
CSF1YLR087C RPL37BP51402 88 aaKnown RBP1.56□□□□□ -2.16
CSF1YLR087C YML054C-AQ3E809 52 aa1.55□□□□□ -2.16
CSF1YLR087C YOR072W-BQ3E832 53 aa1.55□□□□□ -2.16
CSF1YLR087C YLL006W-AQ3E814 58 aa1.54□□□□□ -2.16
CSF1YLR087C RPS30AP0CX33 63 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms