RNA–Protein interactions for RNA: YKL141W

SDH3, Transcript of Subunit of succinate dehydrogenase and of TIM22 translocase, yeastyeast

Gene SDH3, Length 597 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH3YKL141W YAL064WP39711 94 aa2.09□□□□□ -2.07
SDH3YKL141W GAT4P40569 121 aa2.09□□□□□ -2.07
SDH3YKL141W RSM19P53733 91 aaPredicted RBP2.09□□□□□ -2.07
SDH3YKL141W YNL184CP53876 108 aa2.09□□□□□ -2.07
SDH3YKL141W YLL066W-BQ8TGJ7 56 aa2.09□□□□□ -2.07
SDH3YKL141W YOR304C-AO14468 76 aa2.08□□□□□ -2.08
SDH3YKL141W RAD6P06104 172 aa2.08□□□□□ -2.08
SDH3YKL141W FYV5P25585 152 aa2.08□□□□□ -2.08
SDH3YKL141W YBL081WP38180 368 aaKnown RBP2.08□□□□□ -2.08
SDH3YKL141W YGR039WP53225 103 aa2.08□□□□□ -2.08
SDH3YKL141W MPC3P53311 146 aa2.08□□□□□ -2.08
SDH3YKL141W ATP18P81450 59 aa2.08□□□□□ -2.08
SDH3YKL141W COF1Q03048 143 aaKnown RBP2.08□□□□□ -2.08
SDH3YKL141W YGL041C-BQ3E750 60 aa2.08□□□□□ -2.08
SDH3YKL141W YAR023CD6VPM8 179 aa2.07□□□□□ -2.08
SDH3YKL141W YSY6P38374 65 aa2.07□□□□□ -2.08
SDH3YKL141W YDR119W-AQ2V2P9 66 aa2.07□□□□□ -2.08
SDH3YKL141W YPL038W-AQ3E7B4 63 aa2.07□□□□□ -2.08
SDH3YKL141W IGD1P43598 195 aa2.06□□□□□ -2.08
SDH3YKL141W SNA2P56508 79 aa2.06□□□□□ -2.08
SDH3YKL141W YBR230W-AQ3E762 66 aa2.06□□□□□ -2.08
SDH3YKL141W YLR285C-AQ3E771 56 aa2.06□□□□□ -2.08
SDH3YKL141W YNL042W-BQ3E7Z2 85 aa2.06□□□□□ -2.08
SDH3YKL141W YLR307C-AQ3E825 87 aa2.06□□□□□ -2.08
SDH3YKL141W YJL127C-BQ3E828 52 aa2.06□□□□□ -2.08
SDH3YKL141W Q0032Q9ZZX7 96 aa2.06□□□□□ -2.08
SDH3YKL141W YFR009W-AP0C5M9 85 aa2.05□□□□□ -2.08
SDH3YKL141W BET1P22804 142 aa2.05□□□□□ -2.08
SDH3YKL141W AUA1P32450 94 aa2.05□□□□□ -2.08
SDH3YKL141W TDA2P40045 126 aa2.05□□□□□ -2.08
SDH3YKL141W RRT15Q3E811 62 aa2.05□□□□□ -2.08
SDH3YKL141W NUM1Q00402 2748 aa2.04□□□□□ -2.08
SDH3YKL141W ECM12O13529 151 aa2.04□□□□□ -2.08
SDH3YKL141W YER039C-AP0CD97 72 aa2.04□□□□□ -2.08
SDH3YKL141W TOM6P33448 61 aa2.04□□□□□ -2.08
SDH3YKL141W EDC2P40023 145 aaPredicted RBP2.04□□□□□ -2.08
SDH3YKL141W ICS3P47034 131 aa2.04□□□□□ -2.08
SDH3YKL141W YDR029WQ12111 104 aa2.04□□□□□ -2.08
SDH3YKL141W ATP20Q12233 115 aa2.04□□□□□ -2.08
SDH3YKL141W YCR050CP25630 102 aa2.03□□□□□ -2.08
SDH3YKL141W YHL018WP38744 120 aaPredicted RBP2.03□□□□□ -2.08
SDH3YKL141W COX23P38824 151 aa2.03□□□□□ -2.08
SDH3YKL141W RPL38P49167 78 aaKnown RBP2.03□□□□□ -2.08
SDH3YKL141W YGL193CP53097 103 aa2.03□□□□□ -2.08
SDH3YKL141W YIR021W-AQ3E739 70 aa2.03□□□□□ -2.08
SDH3YKL141W RPL36BO14455 100 aaKnown RBP2.02□□□□□ -2.09
SDH3YKL141W YLR156WP0CE96 114 aa2.02□□□□□ -2.09
SDH3YKL141W YLR159WP0CE97 114 aa2.02□□□□□ -2.09
SDH3YKL141W YLR161WP0CE98 114 aa2.02□□□□□ -2.09
SDH3YKL141W YRA2P36036 203 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
SDH3YKL141W RSM18P40033 138 aa2.02□□□□□ -2.09
SDH3YKL141W EDC1P53080 175 aaPredicted RBP2.02□□□□□ -2.09
SDH3YKL141W MMS2P53152 137 aa2.02□□□□□ -2.09
SDH3YKL141W DDR2P89113 61 aa2.02□□□□□ -2.09
SDH3YKL141W TDA8Q6B2U8 126 aa2.02□□□□□ -2.09
SDH3YKL141W YER187WP40102 141 aa2.01□□□□□ -2.09
SDH3YKL141W YBL112CQ3E7Y4 105 aa2.01□□□□□ -2.09
SDH3YKL141W YBL008W-AQ3E821 79 aa2.01□□□□□ -2.09
SDH3YKL141W YHR213W-BQ8TGK1 99 aa2.01□□□□□ -2.09
SDH3YKL141W YDR034C-AP0C289 58 aa2□□□□□ -2.09
SDH3YKL141W YOR072WQ08486 104 aa2□□□□□ -2.09
SDH3YKL141W YOR314WQ12506 109 aa2□□□□□ -2.09
SDH3YKL141W YGR121W-AQ3E816 71 aa2□□□□□ -2.09
SDH3YKL141W UTP20P35194 2493 aaKnown RBP1.99□□□□□ -2.09
SDH3YKL141W BSC4P53841 131 aa1.99□□□□□ -2.09
SDH3YKL141W ECM19Q06011 112 aa1.99□□□□□ -2.09
SDH3YKL141W YHR007C-AQ07074 71 aa1.99□□□□□ -2.09
SDH3YKL141W YDR182W-AQ3E796 67 aa1.99□□□□□ -2.09
SDH3YKL141W YJL133C-AQ3E7A3 74 aa1.99□□□□□ -2.09
SDH3YKL141W AIM4P38305 123 aaPredicted RBP1.98□□□□□ -2.09
SDH3YKL141W YGL034CP53186 121 aa1.98□□□□□ -2.09
SDH3YKL141W YLR162WQ06235 118 aa1.98□□□□□ -2.09
SDH3YKL141W YOL014WQ08110 124 aa1.98□□□□□ -2.09
SDH3YKL141W YDR246W-AQ3E763 66 aa1.98□□□□□ -2.09
SDH3YKL141W MIC10Q96VH5 97 aa1.98□□□□□ -2.09
SDH3YKL141W SPG1P50088 95 aa1.97□□□□□ -2.09
SDH3YKL141W NOP10Q6Q547 58 aaPredicted RBP1.97□□□□□ -2.09
SDH3YKL141W RPL36AP05745 100 aaPredicted RBP1.96□□□□□ -2.1
SDH3YKL141W YPR195CQ06594 109 aa1.96□□□□□ -2.1
SDH3YKL141W YAL067W-AQ8TGK6 75 aa1.96□□□□□ -2.1
SDH3YKL141W YJL197C-AP0C5P0 93 aa1.95□□□□□ -2.1
SDH3YKL141W LCL1Q02786 101 aa1.95□□□□□ -2.1
SDH3YKL141W YOL166W-AQ8TGJ1 51 aa1.95□□□□□ -2.1
SDH3YKL141W YOL013W-AP0C272 63 aaPredicted RBP1.94□□□□□ -2.1
SDH3YKL141W YLR361C-AQ3E795 98 aa1.94□□□□□ -2.1
SDH3YKL141W YOL097W-AQ3E7Y9 61 aa1.94□□□□□ -2.1
SDH3YKL141W YLR157W-DP0CE99 70 aa1.93□□□□□ -2.1
SDH3YKL141W YAR064WP39563 99 aa1.93□□□□□ -2.1
SDH3YKL141W LIP1Q03579 150 aa1.93□□□□□ -2.1
SDH3YKL141W RPS28BP0C0X0 67 aaKnown RBP1.92□□□□□ -2.1
SDH3YKL141W YBR027CP38220 110 aa1.92□□□□□ -2.1
SDH3YKL141W YHL005CP38752 130 aa1.92□□□□□ -2.1
SDH3YKL141W SBH1P52870 82 aa1.92□□□□□ -2.1
SDH3YKL141W RPS28AQ3E7X9 67 aaPredicted RBP1.92□□□□□ -2.1
SDH3YKL141W KTI11Q3E840 82 aa1.92□□□□□ -2.1
SDH3YKL141W YIL102CP40488 101 aa1.91□□□□□ -2.1
SDH3YKL141W LCL2Q08045 131 aa1.91□□□□□ -2.1
SDH3YKL141W YOR268CQ08734 132 aa1.9□□□□□ -2.11
SDH3YKL141W DYN1P36022 4092 aa1.89□□□□□ -2.11
SDH3YKL141W RPS30AP0CX33 63 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 59.7 ms