RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C YPL038W-AQ3E7B4 63 aa3.5□□□□□ -1.85
PAN1YIR006C YDL022C-AP0C5L6 82 aa3.49□□□□□ -1.85
PAN1YIR006C RPL43AP0CX25 92 aaKnown RBP3.49□□□□□ -1.85
PAN1YIR006C RPL43BP0CX26 92 aa3.49□□□□□ -1.85
PAN1YIR006C SBH1P52870 82 aa3.49□□□□□ -1.85
PAN1YIR006C YJL133C-AQ3E7A3 74 aa3.49□□□□□ -1.85
PAN1YIR006C MLF3P32047 452 aa3.49□□□□□ -1.85
PAN1YIR006C ICS3P47034 131 aa3.49□□□□□ -1.85
PAN1YIR006C YDL241WQ07738 123 aa3.49□□□□□ -1.85
PAN1YIR006C YHR007C-AQ07074 71 aa3.49□□□□□ -1.85
PAN1YIR006C YDR119W-AQ2V2P9 66 aa3.49□□□□□ -1.85
PAN1YIR006C TAR1Q8TGM6 124 aa3.48□□□□□ -1.85
PAN1YIR006C BSC4P53841 131 aa3.48□□□□□ -1.85
PAN1YIR006C RPC10P40422 70 aa3.48□□□□□ -1.85
PAN1YIR006C YOR072WQ08486 104 aa3.48□□□□□ -1.85
PAN1YIR006C RRT15Q3E811 62 aa3.48□□□□□ -1.85
PAN1YIR006C YHR213W-BQ8TGK1 99 aa3.48□□□□□ -1.85
PAN1YIR006C YNL042W-BQ3E7Z2 85 aa3.47□□□□□ -1.85
PAN1YIR006C YDR381C-AQ3E6R5 114 aa3.47□□□□□ -1.85
PAN1YIR006C SHH4Q06236 168 aa3.47□□□□□ -1.85
PAN1YIR006C SPT4P32914 102 aaPredicted RBP3.47□□□□□ -1.85
PAN1YIR006C MRPS12P53732 153 aa3.47□□□□□ -1.85
PAN1YIR006C YOR381W-AQ3E804 55 aa3.47□□□□□ -1.85
PAN1YIR006C YBR121C-AP0C5L4 52 aa3.46□□□□□ -1.86
PAN1YIR006C MMS2P53152 137 aa3.46□□□□□ -1.86
PAN1YIR006C YDR034C-AP0C289 58 aa3.45□□□□□ -1.86
PAN1YIR006C MSA2P36157 363 aa3.45□□□□□ -1.86
PAN1YIR006C HUB1Q6Q546 73 aa3.45□□□□□ -1.86
PAN1YIR006C YGL015CP33199 130 aa3.45□□□□□ -1.86
PAN1YIR006C YHL005CP38752 130 aa3.45□□□□□ -1.86
PAN1YIR006C YBR230W-AQ3E762 66 aa3.45□□□□□ -1.86
PAN1YIR006C SDH6Q3E785 79 aa3.45□□□□□ -1.86
PAN1YIR006C EDC1P53080 175 aaPredicted RBP3.45□□□□□ -1.86
PAN1YIR006C YAL065CO13511 128 aa3.44□□□□□ -1.86
PAN1YIR006C PEX22P39718 180 aa3.44□□□□□ -1.86
PAN1YIR006C LIP1Q03579 150 aa3.44□□□□□ -1.86
PAN1YIR006C YBR219CP38317 127 aa3.44□□□□□ -1.86
PAN1YIR006C ECM19Q06011 112 aa3.44□□□□□ -1.86
PAN1YIR006C YCR095W-AQ3E787 52 aa3.43□□□□□ -1.86
PAN1YIR006C YGL149WP53116 101 aa3.43□□□□□ -1.86
PAN1YIR006C AIR2Q12476 344 aaKnown RBP3.42□□□□□ -1.86
PAN1YIR006C OST5Q92316 86 aa3.42□□□□□ -1.86
PAN1YIR006C RPL29P05747 59 aaPredicted RBP3.41□□□□□ -1.86
PAN1YIR006C RPL36AP05745 100 aaPredicted RBP3.41□□□□□ -1.86
PAN1YIR006C YCR043CP25361 127 aa3.41□□□□□ -1.86
PAN1YIR006C HOT13P36078 116 aa3.41□□□□□ -1.86
PAN1YIR006C COX23P38824 151 aa3.41□□□□□ -1.86
PAN1YIR006C MRP10O75012 95 aa3.39□□□□□ -1.87
PAN1YIR006C YFR009W-AP0C5M9 85 aa3.39□□□□□ -1.87
PAN1YIR006C NOP10Q6Q547 58 aaPredicted RBP3.39□□□□□ -1.87
PAN1YIR006C RPS30AP0CX33 63 aaKnown RBP3.39□□□□□ -1.87
PAN1YIR006C RPS30BP0CX34 63 aaKnown RBP3.39□□□□□ -1.87
PAN1YIR006C YER145C-AA0A023PYF4 145 aa3.39□□□□□ -1.87
PAN1YIR006C RPL33AP05744 107 aaKnown RBP3.39□□□□□ -1.87
PAN1YIR006C RPL33BP41056 107 aaKnown RBP3.39□□□□□ -1.87
PAN1YIR006C YLR412C-AQ3E742 68 aa3.39□□□□□ -1.87
PAN1YIR006C RDS3Q06835 107 aaPredicted RBP3.38□□□□□ -1.87
PAN1YIR006C VPS13Q07878 3144 aa3.38□□□□□ -1.87
PAN1YIR006C YAR064WP39563 99 aa3.37□□□□□ -1.87
PAN1YIR006C YGR164WP53291 111 aa3.37□□□□□ -1.87
PAN1YIR006C YBR201C-AQ2V2Q3 67 aa3.36□□□□□ -1.87
PAN1YIR006C SAP30P38429 201 aa3.35□□□□□ -1.87
PAN1YIR006C GCN1P33892 2672 aaKnown RBP3.34□□□□□ -1.87
PAN1YIR006C YNL162W-AQ3E7A8 72 aa3.34□□□□□ -1.87
PAN1YIR006C YBL081WP38180 368 aaKnown RBP3.34□□□□□ -1.87
PAN1YIR006C YKL065W-AQ2V2P2 73 aa3.34□□□□□ -1.87
PAN1YIR006C LCL1Q02786 101 aa3.34□□□□□ -1.88
PAN1YIR006C COX7P10174 60 aa3.33□□□□□ -1.88
PAN1YIR006C YDR182W-AQ3E796 67 aa3.33□□□□□ -1.88
PAN1YIR006C YFR032C-BQ8TGU2 87 aa3.33□□□□□ -1.88
PAN1YIR006C MIC10Q96VH5 97 aa3.32□□□□□ -1.88
PAN1YIR006C OLI1P61829 76 aa3.32□□□□□ -1.88
PAN1YIR006C KSH1Q8TGJ3 72 aa3.32□□□□□ -1.88
PAN1YIR006C IGD1P43598 195 aa3.31□□□□□ -1.88
PAN1YIR006C YLR162WQ06235 118 aa3.31□□□□□ -1.88
PAN1YIR006C YMR001C-AQ8TGS9 76 aa3.31□□□□□ -1.88
PAN1YIR006C YDR246W-AQ3E763 66 aa3.31□□□□□ -1.88
PAN1YIR006C YIL156W-BQ2V2P4 73 aa3.31□□□□□ -1.88
PAN1YIR006C COX8P04039 78 aa3.3□□□□□ -1.88
PAN1YIR006C YGL193CP53097 103 aa3.3□□□□□ -1.88
PAN1YIR006C YOR268CQ08734 132 aa3.3□□□□□ -1.88
PAN1YIR006C SPG1P50088 95 aa3.3□□□□□ -1.88
PAN1YIR006C YMR122CQ03879 124 aa3.3□□□□□ -1.88
PAN1YIR006C YPR153WQ06537 140 aa3.29□□□□□ -1.88
PAN1YIR006C YOL097W-AQ3E7Y9 61 aa3.29□□□□□ -1.88
PAN1YIR006C YOL014WQ08110 124 aa3.28□□□□□ -1.88
PAN1YIR006C YNL277W-AQ3E7Z0 62 aa3.28□□□□□ -1.88
PAN1YIR006C YOL013W-AP0C272 63 aaPredicted RBP3.28□□□□□ -1.88
PAN1YIR006C YGR121W-AQ3E816 71 aa3.28□□□□□ -1.88
PAN1YIR006C DDR48P18899 430 aaKnown RBP3.28□□□□□ -1.88
PAN1YIR006C YDR115WQ04598 105 aa3.28□□□□□ -1.88
PAN1YIR006C YDR010CQ12426 110 aa3.27□□□□□ -1.89
PAN1YIR006C YBR027CP38220 110 aa3.26□□□□□ -1.89
PAN1YIR006C YPR195CQ06594 109 aa3.25□□□□□ -1.89
PAN1YIR006C TDA8Q6B2U8 126 aa3.25□□□□□ -1.89
PAN1YIR006C YLR307C-AQ3E825 87 aa3.25□□□□□ -1.89
PAN1YIR006C GAT4P40569 121 aa3.24□□□□□ -1.89
PAN1YIR006C YMR230W-AQ3E7B5 62 aa3.24□□□□□ -1.89
PAN1YIR006C YEL014CP39999 101 aa3.24□□□□□ -1.89
PAN1YIR006C CUP1-1P0CX80 61 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms