RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W SMD1Q02260 146 aaPredicted RBP4.02□□□□□ -1.77
SMF2YHR050W RPL29P05747 59 aaPredicted RBP4.01□□□□□ -1.77
SMF2YHR050W YLR156WP0CE96 114 aa4.01□□□□□ -1.77
SMF2YHR050W YLR159WP0CE97 114 aa4.01□□□□□ -1.77
SMF2YHR050W YLR161WP0CE98 114 aa4.01□□□□□ -1.77
SMF2YHR050W YAL064WP39711 94 aa4.01□□□□□ -1.77
SMF2YHR050W MPC3P53311 146 aa4.01□□□□□ -1.77
SMF2YHR050W ATP18P81450 59 aa4.01□□□□□ -1.77
SMF2YHR050W YDR246W-AQ3E763 66 aa4.01□□□□□ -1.77
SMF2YHR050W MVB12P42939 101 aa4□□□□□ -1.77
SMF2YHR050W EDC1P53080 175 aaPredicted RBP4□□□□□ -1.77
SMF2YHR050W RSM19P53733 91 aaPredicted RBP4□□□□□ -1.77
SMF2YHR050W YER175W-AQ8TGU4 54 aa4□□□□□ -1.77
SMF2YHR050W RTC6O14464 93 aa4□□□□□ -1.77
SMF2YHR050W YBL081WP38180 368 aaKnown RBP4□□□□□ -1.77
SMF2YHR050W YDR115WQ04598 105 aa4□□□□□ -1.77
SMF2YHR050W AQY2P0CD90 149 aa3.99□□□□□ -1.77
SMF2YHR050W YLL066W-BQ8TGJ7 56 aa3.99□□□□□ -1.77
SMF2YHR050W YFL019CP43576 117 aa3.98□□□□□ -1.77
SMF2YHR050W YGR164WP53291 111 aa3.98□□□□□ -1.77
SMF2YHR050W YNL277W-AQ3E7Z0 62 aa3.98□□□□□ -1.77
SMF2YHR050W YBL039W-BP0C268 59 aa3.97□□□□□ -1.77
SMF2YHR050W YFR009W-AP0C5M9 85 aa3.97□□□□□ -1.77
SMF2YHR050W AUA1P32450 94 aa3.97□□□□□ -1.77
SMF2YHR050W SFT1P43682 97 aa3.97□□□□□ -1.77
SMF2YHR050W ATP20Q12233 115 aa3.97□□□□□ -1.77
SMF2YHR050W TSC3Q3E790 80 aa3.97□□□□□ -1.77
SMF2YHR050W AIM4P38305 123 aaPredicted RBP3.96□□□□□ -1.78
SMF2YHR050W RRT15Q3E811 62 aa3.96□□□□□ -1.78
SMF2YHR050W RPL26AP05743 127 aaKnown RBP3.95□□□□□ -1.78
SMF2YHR050W RPL26BP53221 127 aaKnown RBP3.95□□□□□ -1.78
SMF2YHR050W YAR023CD6VPM8 179 aa3.94□□□□□ -1.78
SMF2YHR050W UBC4P15731 148 aa3.94□□□□□ -1.78
SMF2YHR050W BET1P22804 142 aa3.94□□□□□ -1.78
SMF2YHR050W RSM18P40033 138 aa3.94□□□□□ -1.78
SMF2YHR050W RPL38P49167 78 aaKnown RBP3.94□□□□□ -1.78
SMF2YHR050W UTP20P35194 2493 aaKnown RBP3.94□□□□□ -1.78
SMF2YHR050W YRA2P36036 203 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SMF2YHR050W PEX22P39718 180 aa3.94□□□□□ -1.78
SMF2YHR050W TDA2P40045 126 aa3.94□□□□□ -1.78
SMF2YHR050W YNL162W-AQ3E7A8 72 aa3.94□□□□□ -1.78
SMF2YHR050W NOP10Q6Q547 58 aaPredicted RBP3.93□□□□□ -1.78
SMF2YHR050W SNA2P56508 79 aa3.92□□□□□ -1.78
SMF2YHR050W YOR314WQ12506 109 aa3.92□□□□□ -1.78
SMF2YHR050W KSH1Q8TGJ3 72 aa3.92□□□□□ -1.78
SMF2YHR050W IGD1P43598 195 aa3.91□□□□□ -1.78
SMF2YHR050W YDR182W-AQ3E796 67 aa3.91□□□□□ -1.78
SMF2YHR050W FYV5P25585 152 aa3.9□□□□□ -1.78
SMF2YHR050W ICS3P47034 131 aa3.9□□□□□ -1.78
SMF2YHR050W Q0032Q9ZZX7 96 aa3.9□□□□□ -1.78
SMF2YHR050W YGL041C-BQ3E750 60 aa3.9□□□□□ -1.79
SMF2YHR050W YBR230W-AQ3E762 66 aa3.89□□□□□ -1.79
SMF2YHR050W YJL127C-BQ3E828 52 aa3.89□□□□□ -1.79
SMF2YHR050W DYN1P36022 4092 aa3.89□□□□□ -1.79
SMF2YHR050W RPL36BO14455 100 aaKnown RBP3.88□□□□□ -1.79
SMF2YHR050W RPL36AP05745 100 aaPredicted RBP3.88□□□□□ -1.79
SMF2YHR050W COX23P38824 151 aa3.88□□□□□ -1.79
SMF2YHR050W YLR307C-AQ3E825 87 aa3.88□□□□□ -1.79
SMF2YHR050W YOL166W-AQ8TGJ1 51 aa3.88□□□□□ -1.79
SMF2YHR050W EDC2P40023 145 aaPredicted RBP3.87□□□□□ -1.79
SMF2YHR050W YOL014WQ08110 124 aa3.87□□□□□ -1.79
SMF2YHR050W TDA8Q6B2U8 126 aa3.87□□□□□ -1.79
SMF2YHR050W YNL042W-BQ3E7Z2 85 aa3.87□□□□□ -1.79
SMF2YHR050W YHR213W-BQ8TGK1 99 aa3.85□□□□□ -1.79
SMF2YHR050W YHL005CP38752 130 aa3.84□□□□□ -1.79
SMF2YHR050W YLR162WQ06235 118 aa3.84□□□□□ -1.79
SMF2YHR050W SPT4P32914 102 aaPredicted RBP3.83□□□□□ -1.8
SMF2YHR050W YGL193CP53097 103 aa3.83□□□□□ -1.8
SMF2YHR050W HOT13P36078 116 aa3.82□□□□□ -1.8
SMF2YHR050W YDR034C-AP0C289 58 aa3.81□□□□□ -1.8
SMF2YHR050W DDR2P89113 61 aa3.81□□□□□ -1.8
SMF2YHR050W YPR195CQ06594 109 aa3.81□□□□□ -1.8
SMF2YHR050W YJL133C-AQ3E7A3 74 aa3.81□□□□□ -1.8
SMF2YHR050W LIP1Q03579 150 aa3.8□□□□□ -1.8
SMF2YHR050W YGR121W-AQ3E816 71 aa3.8□□□□□ -1.8
SMF2YHR050W RPS30AP0CX33 63 aaKnown RBP3.79□□□□□ -1.8
SMF2YHR050W RPS30BP0CX34 63 aaKnown RBP3.79□□□□□ -1.8
SMF2YHR050W YEL045CP32616 141 aa3.79□□□□□ -1.8
SMF2YHR050W BSC4P53841 131 aa3.78□□□□□ -1.8
SMF2YHR050W ECM19Q06011 112 aa3.78□□□□□ -1.8
SMF2YHR050W YHR007C-AQ07074 71 aa3.78□□□□□ -1.8
SMF2YHR050W YOR268CQ08734 132 aa3.78□□□□□ -1.8
SMF2YHR050W YOL013W-AP0C272 63 aaPredicted RBP3.78□□□□□ -1.81
SMF2YHR050W GIS2P53849 153 aaKnown RBP RIP-Chip data3.78□□□□□ -1.81not detected
SMF2YHR050W YOR072WQ08486 104 aa3.78□□□□□ -1.81
SMF2YHR050W YKL065W-AQ2V2P2 73 aa3.78□□□□□ -1.81
SMF2YHR050W YOR381W-AQ3E804 55 aa3.78□□□□□ -1.81
SMF2YHR050W YIL102CP40488 101 aa3.75□□□□□ -1.81
SMF2YHR050W MIC10Q96VH5 97 aa3.75□□□□□ -1.81
SMF2YHR050W HHF1P02309 103 aaKnown RBP3.75□□□□□ -1.81
SMF2YHR050W YMR122CQ03879 124 aa3.75□□□□□ -1.81
SMF2YHR050W YER188C-AP0C0V2 99 aa3.71□□□□□ -1.81
SMF2YHR050W OST5Q92316 86 aa3.71□□□□□ -1.82
SMF2YHR050W YAR064WP39563 99 aa3.69□□□□□ -1.82
SMF2YHR050W SPG1P50088 95 aa3.69□□□□□ -1.82
SMF2YHR050W YGL034CP53186 121 aa3.69□□□□□ -1.82
SMF2YHR050W LCL1Q02786 101 aa3.69□□□□□ -1.82
SMF2YHR050W LCL2Q08045 131 aa3.69□□□□□ -1.82
SMF2YHR050W YOR376W-AQ3E805 51 aa3.69□□□□□ -1.82
SMF2YHR050W YJL197C-AP0C5P0 93 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms