RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YCR075W-AQ3E830 75 aa0.36□□□□□ -2.35
SWI4YER111C HFA1P32874 2273 aa0.36□□□□□ -2.35
SWI4YER111C YDR029WQ12111 104 aa0.35□□□□□ -2.35
SWI4YER111C YOR032W-AQ8TGS1 66 aa0.35□□□□□ -2.35
SWI4YER111C PAU6P0CE90 120 aa0.35□□□□□ -2.35
SWI4YER111C PAU18P0CE91 120 aa0.35□□□□□ -2.35
SWI4YER111C YBL071CP38185 102 aa0.35□□□□□ -2.35
SWI4YER111C RSM18P40033 138 aa0.35□□□□□ -2.35
SWI4YER111C TOM1Q03280 3268 aa0.35□□□□□ -2.35
SWI4YER111C YHR173CP38864 112 aa0.34□□□□□ -2.35
SWI4YER111C YMR175W-AQ3E766 64 aa0.34□□□□□ -2.35
SWI4YER111C Q0297Q9ZZV8 51 aa0.34□□□□□ -2.35
SWI4YER111C NHP10Q03435 203 aa0.34□□□□□ -2.36
SWI4YER111C YNR034W-AQ3E841 98 aa0.34□□□□□ -2.36
SWI4YER111C RPS29BP41058 56 aaKnown RBP0.33□□□□□ -2.36
SWI4YER111C YCL001W-BQ96VH2 84 aa0.33□□□□□ -2.36
SWI4YER111C BRR2P32639 2163 aaKnown RBP0.33□□□□□ -2.36
SWI4YER111C SUS1Q6WNK7 96 aa0.33□□□□□ -2.36
SWI4YER111C SNU13P39990 126 aaKnown RBP0.33□□□□□ -2.36
SWI4YER111C PDX3P38075 228 aaKnown RBP0.32□□□□□ -2.36
SWI4YER111C ECM12O13529 151 aa0.32□□□□□ -2.36
SWI4YER111C PAU1P0CE88 120 aa0.32□□□□□ -2.36
SWI4YER111C PAU14P0CE89 120 aa0.32□□□□□ -2.36
SWI4YER111C PAU8P0CE92 120 aa0.32□□□□□ -2.36
SWI4YER111C PAU11P0CE93 120 aa0.32□□□□□ -2.36
SWI4YER111C PAU13P38725 120 aa0.32□□□□□ -2.36
SWI4YER111C YNL190WP53872 204 aa0.32□□□□□ -2.36
SWI4YER111C PAU10Q03050 120 aa0.32□□□□□ -2.36
SWI4YER111C PAU20Q08322 120 aa0.32□□□□□ -2.36
SWI4YER111C PAU9Q3E770 120 aa0.32□□□□□ -2.36
SWI4YER111C SPC1P46965 94 aa0.31□□□□□ -2.36
SWI4YER111C PAU4P53427 120 aa0.31□□□□□ -2.36
SWI4YER111C BSC4P53841 131 aa0.3□□□□□ -2.36
SWI4YER111C YNL042W-BQ3E7Z2 85 aa0.3□□□□□ -2.36
SWI4YER111C SCP1Q08873 200 aa0.3□□□□□ -2.36
SWI4YER111C YOR343CQ12484 108 aa0.3□□□□□ -2.36
SWI4YER111C YOL164W-AQ3E7A5 60 aa0.3□□□□□ -2.36
SWI4YER111C VPS13Q07878 3144 aa0.3□□□□□ -2.36
SWI4YER111C RPA12P32529 125 aaKnown RBP0.29□□□□□ -2.36
SWI4YER111C MHF2Q3E829 80 aa0.29□□□□□ -2.36
SWI4YER111C NHP2P32495 156 aaPredicted RBP0.28□□□□□ -2.36
SWI4YER111C YKL068W-AQ3E826 78 aa0.28□□□□□ -2.36
SWI4YER111C COX7P10174 60 aa0.28□□□□□ -2.37
SWI4YER111C RPL38P49167 78 aaKnown RBP0.27□□□□□ -2.37
SWI4YER111C YGL194C-AQ2V2P6 80 aa0.27□□□□□ -2.37
SWI4YER111C YBR016WP38216 128 aa0.27□□□□□ -2.37
SWI4YER111C RPC10P40422 70 aa0.27□□□□□ -2.37
SWI4YER111C RPS29AP41057 56 aaKnown RBP0.27□□□□□ -2.37
SWI4YER111C YMR122W-AQ3E842 84 aa0.27□□□□□ -2.37
SWI4YER111C POL2P21951 2222 aaKnown RBP0.27□□□□□ -2.37
SWI4YER111C YNL198CP40166 100 aa0.26□□□□□ -2.37
SWI4YER111C YAL065CO13511 128 aa0.26□□□□□ -2.37
SWI4YER111C UTP20P35194 2493 aaKnown RBP0.26□□□□□ -2.37
SWI4YER111C URA2P07259 2214 aaKnown RBP0.26□□□□□ -2.37
SWI4YER111C POC4Q12245 148 aaPredicted RBP0.26□□□□□ -2.37
SWI4YER111C Q0032Q9ZZX7 96 aa0.26□□□□□ -2.37
SWI4YER111C YCR085WP25650 117 aa0.25□□□□□ -2.37
SWI4YER111C TOM6P33448 61 aa0.25□□□□□ -2.37
SWI4YER111C YKL065W-AQ2V2P2 73 aa0.25□□□□□ -2.37
SWI4YER111C YBR201C-AQ2V2Q3 67 aa0.25□□□□□ -2.37
SWI4YER111C YHR214C-DP0CX93 97 aa0.24□□□□□ -2.37
SWI4YER111C YOR314WQ12506 109 aa0.24□□□□□ -2.37
SWI4YER111C ATP18P81450 59 aa0.23□□□□□ -2.37
SWI4YER111C YOL097W-AQ3E7Y9 61 aa0.23□□□□□ -2.37
SWI4YER111C YGR035W-AQ45U48 73 aa0.23□□□□□ -2.37
SWI4YER111C EDC1P53080 175 aaPredicted RBP0.23□□□□□ -2.37
SWI4YER111C NOP10Q6Q547 58 aaPredicted RBP0.23□□□□□ -2.37
SWI4YER111C IRA2P19158 3079 aa0.22□□□□□ -2.37
SWI4YER111C CWP2P43497 92 aa0.22□□□□□ -2.37
SWI4YER111C PAU23Q07987 124 aa0.22□□□□□ -2.37
SWI4YER111C PAU17Q12370 124 aa0.22□□□□□ -2.37
SWI4YER111C FPR2P32472 135 aa0.22□□□□□ -2.37
SWI4YER111C YGR025WP53216 100 aa0.22□□□□□ -2.37
SWI4YER111C CSF1Q12150 2958 aa0.22□□□□□ -2.37
SWI4YER111C YIL156W-BQ2V2P4 73 aa0.21□□□□□ -2.38
SWI4YER111C YBR032WP38223 100 aa0.21□□□□□ -2.38
SWI4YER111C YDR381C-AQ3E6R5 114 aa0.21□□□□□ -2.38
SWI4YER111C SDH6Q3E785 79 aa0.21□□□□□ -2.38
SWI4YER111C YGR121W-AQ3E816 71 aa0.21□□□□□ -2.38
SWI4YER111C YJR107C-AP0CT86 78 aa0.2□□□□□ -2.38
SWI4YER111C ATX1P38636 73 aa0.2□□□□□ -2.38
SWI4YER111C SWM2P40342 146 aa0.2□□□□□ -2.38
SWI4YER111C YFR009W-AP0C5M9 85 aa0.2□□□□□ -2.38
SWI4YER111C BLM10P43583 2143 aa0.19□□□□□ -2.38
SWI4YER111C YOR105WQ08504 108 aa0.19□□□□□ -2.38
SWI4YER111C YPR145C-AQ2V2P0 78 aa0.19□□□□□ -2.38
SWI4YER111C YDR119W-AQ2V2P9 66 aa0.19□□□□□ -2.38
SWI4YER111C YDL022C-AP0C5L6 82 aa0.18□□□□□ -2.38
SWI4YER111C YPR108W-AQ3E7B3 70 aa0.18□□□□□ -2.38
SWI4YER111C QCR9P22289 66 aa0.18□□□□□ -2.38
SWI4YER111C YBL044WP38194 122 aa0.16□□□□□ -2.38
SWI4YER111C ATP17Q06405 101 aa0.16□□□□□ -2.38
SWI4YER111C TAO3P40468 2376 aa0.16□□□□□ -2.38
SWI4YER111C SGF11Q03067 99 aa0.16□□□□□ -2.38
SWI4YER111C YHR213W-AQ8TGT4 77 aa0.15□□□□□ -2.39
SWI4YER111C LSM2P38203 95 aaKnown RBP0.14□□□□□ -2.39
SWI4YER111C SPI1P40092 148 aa0.14□□□□□ -2.39
SWI4YER111C YIL134C-AQ45U18 67 aa0.14□□□□□ -2.39
SWI4YER111C TOR2P32600 2474 aaKnown RBP0.13□□□□□ -2.39
SWI4YER111C YOR011W-AQ3E807 68 aa0.12□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms