RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C YDL241WQ07738 123 aa2.18□□□□□ -2.06
CDC40YDR364C RRT15Q3E811 62 aa2.18□□□□□ -2.06
CDC40YDR364C YLL006W-AQ3E814 58 aa2.18□□□□□ -2.06
CDC40YDR364C AQY2P0CD90 149 aa2.17□□□□□ -2.06
CDC40YDR364C ANB1P19211 157 aa2.17□□□□□ -2.06
CDC40YDR364C YHR130CP38834 111 aa2.17□□□□□ -2.06
CDC40YDR364C MVB12P42939 101 aa2.16□□□□□ -2.06
CDC40YDR364C SNA2P56508 79 aa2.16□□□□□ -2.06
CDC40YDR364C RGM1Q00453 211 aa2.16□□□□□ -2.06
CDC40YDR364C RAD6P06104 172 aa2.15□□□□□ -2.07
CDC40YDR364C YBL039W-BP0C268 59 aa2.15□□□□□ -2.07
CDC40YDR364C HYP2P23301 157 aaKnown RBP2.15□□□□□ -2.07
CDC40YDR364C HUR1P45820 110 aa2.15□□□□□ -2.07
CDC40YDR364C HPA2Q06592 156 aa2.15□□□□□ -2.07
CDC40YDR364C YDR029WQ12111 104 aa2.15□□□□□ -2.07
CDC40YDR364C Q0032Q9ZZX7 96 aa2.15□□□□□ -2.07
CDC40YDR364C RPL26AP05743 127 aaKnown RBP2.14□□□□□ -2.07
CDC40YDR364C RPL29P05747 59 aaPredicted RBP2.14□□□□□ -2.07
CDC40YDR364C KNH1P50112 268 aa2.14□□□□□ -2.07
CDC40YDR364C RPL26BP53221 127 aaKnown RBP2.14□□□□□ -2.07
CDC40YDR364C MPC3P53311 146 aa2.14□□□□□ -2.07
CDC40YDR364C YDL012CQ12489 107 aa2.14□□□□□ -2.07
CDC40YDR364C YOR034C-AQ3E735 80 aa2.14□□□□□ -2.07
CDC40YDR364C YGL041C-BQ3E750 60 aa2.14□□□□□ -2.07
CDC40YDR364C ECM12O13529 151 aa2.13□□□□□ -2.07
CDC40YDR364C YDR034C-AP0C289 58 aa2.13□□□□□ -2.07
CDC40YDR364C MRPL24P36525 258 aaPredicted RBP2.13□□□□□ -2.07
CDC40YDR364C COF1Q03048 143 aaKnown RBP2.13□□□□□ -2.07
CDC40YDR364C IRC21Q04772 201 aa2.13□□□□□ -2.07
CDC40YDR364C DSE2P38844 325 aa2.12□□□□□ -2.07
CDC40YDR364C AIM19P40502 157 aa2.12□□□□□ -2.07
CDC40YDR364C ATP20Q12233 115 aa2.12□□□□□ -2.07
CDC40YDR364C YLR236CA0A023PZG4 107 aa2.11□□□□□ -2.07
CDC40YDR364C UBC4P15731 148 aa2.11□□□□□ -2.07
CDC40YDR364C ICY1Q04329 127 aa2.11□□□□□ -2.07
CDC40YDR364C SLO1Q3E784 85 aa2.11□□□□□ -2.07
CDC40YDR364C RPA12P32529 125 aaKnown RBP2.1□□□□□ -2.07
CDC40YDR364C YGR039WP53225 103 aa2.1□□□□□ -2.07
CDC40YDR364C YNL042W-BQ3E7Z2 85 aa2.1□□□□□ -2.07
CDC40YDR364C YLR307C-AQ3E825 87 aa2.1□□□□□ -2.07
CDC40YDR364C YBR230W-AQ3E762 66 aa2.1□□□□□ -2.07
CDC40YDR364C YJL127C-BQ3E828 52 aa2.1□□□□□ -2.07
CDC40YDR364C ATX1P38636 73 aa2.09□□□□□ -2.08
CDC40YDR364C LCL2Q08045 131 aa2.09□□□□□ -2.08
CDC40YDR364C YER039C-AP0CD97 72 aa2.08□□□□□ -2.08
CDC40YDR364C YJR107C-AP0CT86 78 aa2.08□□□□□ -2.08
CDC40YDR364C FYV5P25585 152 aa2.08□□□□□ -2.08
CDC40YDR364C ATP18P81450 59 aa2.08□□□□□ -2.08
CDC40YDR364C DDR2P89113 61 aa2.08□□□□□ -2.08
CDC40YDR364C LIP1Q03579 150 aa2.08□□□□□ -2.08
CDC40YDR364C INO4P13902 151 aa2.07□□□□□ -2.08
CDC40YDR364C YCR085WP25650 117 aa2.07□□□□□ -2.08
CDC40YDR364C GAT4P40569 121 aa2.07□□□□□ -2.08
CDC40YDR364C SFT1P43682 97 aa2.07□□□□□ -2.08
CDC40YDR364C YJL144WP47009 104 aa2.07□□□□□ -2.08
CDC40YDR364C LCL1Q02786 101 aa2.07□□□□□ -2.08
CDC40YDR364C RUB1Q03919 77 aa2.07□□□□□ -2.08
CDC40YDR364C YNL277W-AQ3E7Z0 62 aa2.07□□□□□ -2.08
CDC40YDR364C EMC6Q12431 108 aa2.06□□□□□ -2.08
CDC40YDR364C YFR009W-AP0C5M9 85 aa2.05□□□□□ -2.08
CDC40YDR364C BSC4P53841 131 aa2.05□□□□□ -2.08
CDC40YDR364C YOR072WQ08486 104 aa2.05□□□□□ -2.08
CDC40YDR364C RPL36BO14455 100 aaKnown RBP2.04□□□□□ -2.08
CDC40YDR364C YHR007C-AQ07074 71 aa2.04□□□□□ -2.08
CDC40YDR364C YDR381C-AQ3E6R5 114 aa2.04□□□□□ -2.08
CDC40YDR364C TDA2P40045 126 aa2.03□□□□□ -2.08
CDC40YDR364C YOR381W-AQ3E804 55 aa2.03□□□□□ -2.08
CDC40YDR364C RPL38P49167 78 aaKnown RBP2.02□□□□□ -2.09
CDC40YDR364C SPG1P50088 95 aa2.02□□□□□ -2.09
CDC40YDR364C EDC1P53080 175 aaPredicted RBP2.02□□□□□ -2.09
CDC40YDR364C RSM19P53733 91 aaPredicted RBP2.02□□□□□ -2.09
CDC40YDR364C YIR021W-AQ3E739 70 aa2.02□□□□□ -2.09
CDC40YDR364C YHR213W-BQ8TGK1 99 aa2.02□□□□□ -2.09
CDC40YDR364C DDR48P18899 430 aaKnown RBP2.01□□□□□ -2.09
CDC40YDR364C ICS3P47034 131 aa2.01□□□□□ -2.09
CDC40YDR364C YJL133C-AQ3E7A3 74 aa2.01□□□□□ -2.09
CDC40YDR364C YGR121W-AQ3E816 71 aa2.01□□□□□ -2.09
CDC40YDR364C COX8P04039 78 aa2□□□□□ -2.09
CDC40YDR364C COX23P38824 151 aa2□□□□□ -2.09
CDC40YDR364C YFL065CP43539 102 aa2□□□□□ -2.09
CDC40YDR364C YPR203WQ08994 102 aa2□□□□□ -2.09
CDC40YDR364C YFL041W-AQ3E817 63 aa2□□□□□ -2.09
CDC40YDR364C YHL018WP38744 120 aaPredicted RBP1.99□□□□□ -2.09
CDC40YDR364C RSM18P40033 138 aa1.99□□□□□ -2.09
CDC40YDR364C YGL149WP53116 101 aa1.99□□□□□ -2.09
CDC40YDR364C YBR027CP38220 110 aa1.98□□□□□ -2.09
CDC40YDR364C YSY6P38374 65 aa1.98□□□□□ -2.09
CDC40YDR364C YHL042WP38729 150 aa1.98□□□□□ -2.09
CDC40YDR364C YLR285C-AQ3E771 56 aa1.98□□□□□ -2.09
CDC40YDR364C YLR162WQ06235 118 aa1.98□□□□□ -2.09
CDC40YDR364C MIC10Q96VH5 97 aa1.98□□□□□ -2.09
CDC40YDR364C YJL197C-AP0C5P0 93 aa1.97□□□□□ -2.09
CDC40YDR364C YLR157W-DP0CE99 70 aa1.97□□□□□ -2.09
CDC40YDR364C YOR304C-AO14468 76 aa1.95□□□□□ -2.1
CDC40YDR364C YCR050CP25630 102 aa1.95□□□□□ -2.1
CDC40YDR364C YHR086W-AQ3E746 53 aa1.95□□□□□ -2.1
CDC40YDR364C YOL097W-AQ3E7Y9 61 aa1.95□□□□□ -2.1
CDC40YDR364C YAR064WP39563 99 aa1.93□□□□□ -2.1
CDC40YDR364C YDR010CQ12426 110 aa1.93□□□□□ -2.1
CDC40YDR364C YDR119W-AQ2V2P9 66 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms