RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W RTC6O14464 93 aa5.59□□□□□ -1.52
NDE2YDL085W AQY2P0CD90 149 aa5.59□□□□□ -1.52
NDE2YDL085W RPL26AP05743 127 aaKnown RBP5.58□□□□□ -1.52
NDE2YDL085W PEX22P39718 180 aa5.58□□□□□ -1.52
NDE2YDL085W YFL019CP43576 117 aa5.58□□□□□ -1.52
NDE2YDL085W RPL26BP53221 127 aaKnown RBP5.58□□□□□ -1.52
NDE2YDL085W TSC3Q3E790 80 aa5.58□□□□□ -1.52
NDE2YDL085W NUM1Q00402 2748 aa5.58□□□□□ -1.52
NDE2YDL085W YBL039W-BP0C268 59 aa5.57□□□□□ -1.52
NDE2YDL085W YAL064WP39711 94 aa5.57□□□□□ -1.52
NDE2YDL085W RSM19P53733 91 aaPredicted RBP5.56□□□□□ -1.52
NDE2YDL085W YLR285C-AQ3E771 56 aa5.56□□□□□ -1.52
NDE2YDL085W YRA2P36036 203 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
NDE2YDL085W GAT4P40569 121 aa5.56□□□□□ -1.52
NDE2YDL085W YDR115WQ04598 105 aa5.56□□□□□ -1.52
NDE2YDL085W DIF1O13577 133 aa5.55□□□□□ -1.52
NDE2YDL085W BET1P22804 142 aa5.55□□□□□ -1.52
NDE2YDL085W UBC4P15731 148 aa5.53□□□□□ -1.52
NDE2YDL085W YBL081WP38180 368 aaKnown RBP5.53□□□□□ -1.52
NDE2YDL085W YNL162W-AQ3E7A8 72 aa5.53□□□□□ -1.52
NDE2YDL085W YLL066W-BQ8TGJ7 56 aa5.53□□□□□ -1.52
NDE2YDL085W YFR009W-AP0C5M9 85 aa5.52□□□□□ -1.53
NDE2YDL085W EDC1P53080 175 aaPredicted RBP5.52□□□□□ -1.53
NDE2YDL085W YLR156WP0CE96 114 aa5.52□□□□□ -1.53
NDE2YDL085W YLR159WP0CE97 114 aa5.52□□□□□ -1.53
NDE2YDL085W YLR161WP0CE98 114 aa5.52□□□□□ -1.53
NDE2YDL085W TDA2P40045 126 aa5.51□□□□□ -1.53
NDE2YDL085W YAR023CD6VPM8 179 aa5.5□□□□□ -1.53
NDE2YDL085W FYV5P25585 152 aa5.5□□□□□ -1.53
NDE2YDL085W YER187WP40102 141 aa5.5□□□□□ -1.53
NDE2YDL085W RPL38P49167 78 aaKnown RBP5.5□□□□□ -1.53
NDE2YDL085W RPL11AP0C0W9 174 aaKnown RBP5.49□□□□□ -1.53
NDE2YDL085W YGL041C-BQ3E750 60 aa5.49□□□□□ -1.53
NDE2YDL085W RPL11BQ3E757 174 aaPredicted RBP5.49□□□□□ -1.53
NDE2YDL085W YBR230W-AQ3E762 66 aa5.48□□□□□ -1.53
NDE2YDL085W AUA1P32450 94 aa5.48□□□□□ -1.53
NDE2YDL085W SNA2P56508 79 aa5.48□□□□□ -1.53
NDE2YDL085W YJL127C-BQ3E828 52 aa5.48□□□□□ -1.53
NDE2YDL085W IGD1P43598 195 aa5.47□□□□□ -1.53
NDE2YDL085W Q0032Q9ZZX7 96 aa5.47□□□□□ -1.53
NDE2YDL085W RSM18P40033 138 aa5.46□□□□□ -1.54
NDE2YDL085W RRT15Q3E811 62 aa5.46□□□□□ -1.54
NDE2YDL085W ICS3P47034 131 aa5.45□□□□□ -1.54
NDE2YDL085W ATP20Q12233 115 aa5.45□□□□□ -1.54
NDE2YDL085W YNL042W-BQ3E7Z2 85 aa5.45□□□□□ -1.54
NDE2YDL085W YLR307C-AQ3E825 87 aa5.45□□□□□ -1.54
NDE2YDL085W MIC10Q96VH5 97 aa5.45□□□□□ -1.54
NDE2YDL085W TDA8Q6B2U8 126 aa5.44□□□□□ -1.54
NDE2YDL085W SPT4P32914 102 aaPredicted RBP5.43□□□□□ -1.54
NDE2YDL085W COX23P38824 151 aa5.42□□□□□ -1.54
NDE2YDL085W AIM4P38305 123 aaPredicted RBP5.41□□□□□ -1.54
NDE2YDL085W YDR246W-AQ3E763 66 aa5.41□□□□□ -1.54
NDE2YDL085W EDC2P40023 145 aaPredicted RBP5.41□□□□□ -1.54
NDE2YDL085W YOR314WQ12506 109 aa5.41□□□□□ -1.54
NDE2YDL085W YHR213W-BQ8TGK1 99 aa5.4□□□□□ -1.55
NDE2YDL085W YOR268CQ08734 132 aa5.38□□□□□ -1.55
NDE2YDL085W YOL014WQ08110 124 aa5.37□□□□□ -1.55
NDE2YDL085W YJL133C-AQ3E7A3 74 aa5.37□□□□□ -1.55
NDE2YDL085W UTP20P35194 2493 aaKnown RBP5.36□□□□□ -1.55
NDE2YDL085W YGL193CP53097 103 aa5.35□□□□□ -1.55
NDE2YDL085W YOR376W-AQ3E805 51 aa5.35□□□□□ -1.55
NDE2YDL085W NOP10Q6Q547 58 aaPredicted RBP5.35□□□□□ -1.55
NDE2YDL085W RPL36BO14455 100 aaKnown RBP5.34□□□□□ -1.56
NDE2YDL085W MRP10O75012 95 aa5.33□□□□□ -1.56
NDE2YDL085W DDR2P89113 61 aa5.33□□□□□ -1.56
NDE2YDL085W YDR182W-AQ3E796 67 aa5.33□□□□□ -1.56
NDE2YDL085W YDR034C-AP0C289 58 aa5.32□□□□□ -1.56
NDE2YDL085W ECM19Q06011 112 aa5.32□□□□□ -1.56
NDE2YDL085W YOR072WQ08486 104 aa5.31□□□□□ -1.56
NDE2YDL085W RPL36AP05745 100 aaPredicted RBP5.3□□□□□ -1.56
NDE2YDL085W YGL034CP53186 121 aa5.3□□□□□ -1.56
NDE2YDL085W BSC4P53841 131 aa5.3□□□□□ -1.56
NDE2YDL085W YHR007C-AQ07074 71 aa5.3□□□□□ -1.56
NDE2YDL085W YOR381W-AQ3E804 55 aa5.29□□□□□ -1.56
NDE2YDL085W HHF1P02309 103 aaKnown RBP5.28□□□□□ -1.56
NDE2YDL085W HOT13P36078 116 aa5.27□□□□□ -1.57
NDE2YDL085W YLR162WQ06235 118 aa5.27□□□□□ -1.57
NDE2YDL085W YBR182C-AQ8TGU6 64 aa5.27□□□□□ -1.57
NDE2YDL085W YEL045CP32616 141 aa5.26□□□□□ -1.57
NDE2YDL085W YGR121W-AQ3E816 71 aa5.26□□□□□ -1.57
NDE2YDL085W YOL166W-AQ8TGJ1 51 aa5.26□□□□□ -1.57
NDE2YDL085W YIL102CP40488 101 aa5.25□□□□□ -1.57
NDE2YDL085W GIS2P53849 153 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
NDE2YDL085W YPR195CQ06594 109 aa5.25□□□□□ -1.57
NDE2YDL085W YML100W-AQ8TGT0 57 aa5.25□□□□□ -1.57
NDE2YDL085W LIP1Q03579 150 aa5.23□□□□□ -1.57
NDE2YDL085W YHL005CP38752 130 aa5.22□□□□□ -1.57
NDE2YDL085W DYN1P36022 4092 aa5.21□□□□□ -1.58
NDE2YDL085W SPG1P50088 95 aa5.2□□□□□ -1.58
NDE2YDL085W YKL065W-AQ2V2P2 73 aa5.2□□□□□ -1.58
NDE2YDL085W YER188C-AP0C0V2 99 aa5.18□□□□□ -1.58
NDE2YDL085W RPS30AP0CX33 63 aaKnown RBP5.18□□□□□ -1.58
NDE2YDL085W RPS30BP0CX34 63 aaKnown RBP5.18□□□□□ -1.58
NDE2YDL085W LCL1Q02786 101 aa5.18□□□□□ -1.58
NDE2YDL085W YMR122CQ03879 124 aa5.18□□□□□ -1.58
NDE2YDL085W OST5Q92316 86 aa5.18□□□□□ -1.58
NDE2YDL085W YOL013W-AP0C272 63 aaPredicted RBP5.17□□□□□ -1.58
NDE2YDL085W YJL197C-AP0C5P0 93 aa5.17□□□□□ -1.58
NDE2YDL085W YAR064WP39563 99 aa5.17□□□□□ -1.58
NDE2YDL085W YMR230W-AQ3E7B5 62 aa5.15□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms