RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C HHF1P02309 103 aaKnown RBP4.17□□□□□ -1.74
MDH3YDL078C YLR156WP0CE96 114 aa4.17□□□□□ -1.74
MDH3YDL078C YLR159WP0CE97 114 aa4.17□□□□□ -1.74
MDH3YDL078C YLR161WP0CE98 114 aa4.17□□□□□ -1.74
MDH3YDL078C YGL088WP53151 121 aa4.17□□□□□ -1.74
MDH3YDL078C YGL034CP53186 121 aa4.17□□□□□ -1.74
MDH3YDL078C ERI1P62651 68 aaKnown RBP4.17□□□□□ -1.74
MDH3YDL078C YLR342W-AQ3E810 57 aa4.17□□□□□ -1.74
MDH3YDL078C YOL085CQ99345 113 aa4.17□□□□□ -1.74
MDH3YDL078C YMR141CP40211 102 aa4.16□□□□□ -1.74
MDH3YDL078C MPC3P53311 146 aa4.16□□□□□ -1.74
MDH3YDL078C YLR162WQ06235 118 aa4.16□□□□□ -1.74
MDH3YDL078C CRC1Q12289 327 aa4.16□□□□□ -1.74
MDH3YDL078C YDR182W-AQ3E796 67 aa4.16□□□□□ -1.74
MDH3YDL078C YOR008C-AQ3E7B9 74 aa4.16□□□□□ -1.74
MDH3YDL078C IRC21Q04772 201 aa4.15□□□□□ -1.75
MDH3YDL078C YGR121W-AQ3E816 71 aa4.15□□□□□ -1.75
MDH3YDL078C RPL36BO14455 100 aaKnown RBP4.14□□□□□ -1.75
MDH3YDL078C RPL36AP05745 100 aaPredicted RBP4.14□□□□□ -1.75
MDH3YDL078C RPR2P40571 144 aa4.14□□□□□ -1.75
MDH3YDL078C RPL26BP53221 127 aaKnown RBP4.14□□□□□ -1.75
MDH3YDL078C YPS5P53057 165 aa4.13□□□□□ -1.75
MDH3YDL078C YEL045CP32616 141 aa4.12□□□□□ -1.75
MDH3YDL078C SHU1P38751 150 aa4.12□□□□□ -1.75
MDH3YDL078C YGR240C-AQ3E786 66 aa4.12□□□□□ -1.75
MDH3YDL078C OST5Q92316 86 aa4.12□□□□□ -1.75
MDH3YDL078C ATP15P21306 62 aa4.11□□□□□ -1.75
MDH3YDL078C MRPS12P53732 153 aa4.11□□□□□ -1.75
MDH3YDL078C YNL190WP53872 204 aa4.11□□□□□ -1.75
MDH3YDL078C YBR200W-AQ3E755 54 aa4.11□□□□□ -1.75
MDH3YDL078C QCR8P08525 94 aa4.1□□□□□ -1.75
MDH3YDL078C YAL064WP39711 94 aa4.1□□□□□ -1.75
MDH3YDL078C YMR122CQ03879 124 aa4.1□□□□□ -1.75
MDH3YDL078C YER188C-AP0C0V2 99 aa4.09□□□□□ -1.75
MDH3YDL078C YJR107C-AP0CT86 78 aa4.09□□□□□ -1.75
MDH3YDL078C SPC1P46965 94 aa4.09□□□□□ -1.75
MDH3YDL078C KRE9P39005 276 aa4.08□□□□□ -1.76
MDH3YDL078C ARC15P40518 154 aaRIP-Chip data4.08□□□□□ -1.76not detected
MDH3YDL078C YER175W-AQ8TGU4 54 aa4.08□□□□□ -1.76
MDH3YDL078C DDR48P18899 430 aaKnown RBP4.07□□□□□ -1.76
MDH3YDL078C FYV5P25585 152 aa4.07□□□□□ -1.76
MDH3YDL078C EDC1P53080 175 aaPredicted RBP4.07□□□□□ -1.76
MDH3YDL078C RGM1Q00453 211 aa4.07□□□□□ -1.76
MDH3YDL078C YCR043CP25361 127 aa4.06□□□□□ -1.76
MDH3YDL078C NOP10Q6Q547 58 aaPredicted RBP4.06□□□□□ -1.76
MDH3YDL078C YLR236CA0A023PZG4 107 aa4.05□□□□□ -1.76
MDH3YDL078C YOR020W-AQ3E824 90 aa4.05□□□□□ -1.76
MDH3YDL078C ATP18P81450 59 aa4.04□□□□□ -1.76
MDH3YDL078C YPR153WQ06537 140 aa4.04□□□□□ -1.76
MDH3YDL078C YJR146WP47174 117 aa4.03□□□□□ -1.76
MDH3YDL078C PMP3P87284 55 aa4.03□□□□□ -1.76
MDH3YDL078C YOL166W-AQ8TGJ1 51 aa4.03□□□□□ -1.76
MDH3YDL078C RPS30AP0CX33 63 aaKnown RBP4.02□□□□□ -1.77
MDH3YDL078C RPS30BP0CX34 63 aaKnown RBP4.02□□□□□ -1.77
MDH3YDL078C YPR195CQ06594 109 aa4.02□□□□□ -1.77
MDH3YDL078C RTC6O14464 93 aa4.01□□□□□ -1.77
MDH3YDL078C YLL066W-BQ8TGJ7 56 aa4.01□□□□□ -1.77
MDH3YDL078C RPL33AP05744 107 aaKnown RBP4□□□□□ -1.77
MDH3YDL078C RPL33BP41056 107 aaKnown RBP4□□□□□ -1.77
MDH3YDL078C RPL38P49167 78 aaKnown RBP4□□□□□ -1.77
MDH3YDL078C GIS2P53849 153 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
MDH3YDL078C YMR122W-AQ3E842 84 aa4□□□□□ -1.77
MDH3YDL078C HUB1Q6Q546 73 aa4□□□□□ -1.77
MDH3YDL078C YPR010C-AA5Z2X5 72 aa3.99□□□□□ -1.77
MDH3YDL078C QCR10P37299 77 aa3.98□□□□□ -1.77
MDH3YDL078C YOR034C-AQ3E735 80 aa3.98□□□□□ -1.77
MDH3YDL078C YCR095W-AQ3E787 52 aa3.96□□□□□ -1.78
MDH3YDL078C YDR115WQ04598 105 aa3.95□□□□□ -1.78
MDH3YDL078C YOL014WQ08110 124 aa3.95□□□□□ -1.78
MDH3YDL078C YFR009W-AP0C5M9 85 aa3.94□□□□□ -1.78
MDH3YDL078C HOT13P36078 116 aa3.94□□□□□ -1.78
MDH3YDL078C LCL2Q08045 131 aa3.94□□□□□ -1.78
MDH3YDL078C YEL008WP40001 126 aa3.93□□□□□ -1.78
MDH3YDL078C LIP1Q03579 150 aa3.93□□□□□ -1.78
MDH3YDL078C YFR032C-BQ8TGU2 87 aa3.93□□□□□ -1.78
MDH3YDL078C YAR023CD6VPM8 179 aa3.92□□□□□ -1.78
MDH3YDL078C YIL102CP40488 101 aa3.92□□□□□ -1.78
MDH3YDL078C SOM1Q05676 74 aa3.92□□□□□ -1.78
MDH3YDL078C YDR034C-AP0C289 58 aa3.91□□□□□ -1.78
MDH3YDL078C COX14P39103 70 aa3.9□□□□□ -1.79
MDH3YDL078C YGL149WP53116 101 aa3.9□□□□□ -1.79
MDH3YDL078C MRX7P53869 86 aa3.9□□□□□ -1.79
MDH3YDL078C SNA2P56508 79 aa3.9□□□□□ -1.79
MDH3YDL078C YLL006W-AQ3E814 58 aa3.9□□□□□ -1.79
MDH3YDL078C COX23P38824 151 aa3.89□□□□□ -1.79
MDH3YDL078C EDC2P40023 145 aaPredicted RBP3.89□□□□□ -1.79
MDH3YDL078C BSC4P53841 131 aa3.89□□□□□ -1.79
MDH3YDL078C YDR010CQ12426 110 aa3.89□□□□□ -1.79
MDH3YDL078C YBR219CP38317 127 aa3.88□□□□□ -1.79
MDH3YDL078C RPC10P40422 70 aa3.88□□□□□ -1.79
MDH3YDL078C YIL156W-BQ2V2P4 73 aa3.88□□□□□ -1.79
MDH3YDL078C YNL042W-BQ3E7Z2 85 aa3.88□□□□□ -1.79
MDH3YDL078C SDH6Q3E785 79 aa3.87□□□□□ -1.79
MDH3YDL078C YLR157W-DP0CE99 70 aa3.86□□□□□ -1.79
MDH3YDL078C ATP17Q06405 101 aa3.86□□□□□ -1.79
MDH3YDL078C YBL008W-AQ3E821 79 aa3.86□□□□□ -1.79
MDH3YDL078C YJL197C-AP0C5P0 93 aa3.85□□□□□ -1.79
MDH3YDL078C YMR001C-AQ8TGS9 76 aa3.85□□□□□ -1.79
MDH3YDL078C RPL29P05747 59 aaPredicted RBP3.83□□□□□ -1.8
MDH3YDL078C FYV12Q08559 129 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 88.7 ms