RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 GBA2Q9HCG7 927 aaPredicted RBP5.8□□□□□ -1.48
LINC00397-202ENST00000606785 FSCN3Q9NQT6 498 aa5.8□□□□□ -1.48
LINC00397-202ENST00000606785 TBC1D22BQ9NU19 505 aa5.8□□□□□ -1.48
LINC00397-202ENST00000606785 NDUFAF4Q9P032 175 aa5.8□□□□□ -1.48
LINC00397-202ENST00000606785 PI4KBQ9UBF8 816 aa5.8□□□□□ -1.48
LINC00397-202ENST00000606785 NDRG4Q9ULP0 352 aaKnown RBP5.8□□□□□ -1.48
LINC00397-202ENST00000606785 E7EVH7 732 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 TOR1BO14657 336 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 PPP6R2O75170 966 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 TAF5LO75529 589 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 DDX58O95786 925 aaKnown RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 C1QTNF9P0C862 333 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 HGFP14210 728 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 PRKAR1BP31321 381 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 ZEB1P37275 1124 aaPredicted RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 MCM2P49736 904 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 ANXA11P50995 505 aaKnown RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 PGDP52209 483 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 MC2RQ01718 297 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 CCNIQ14094 377 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 RPS6KA2Q15349 733 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 SMAD1Q15797 465 aaKnown RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 NBPF8Q3BBV2 869 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 ARHGAP40Q5TG30 622 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 SFRP4Q6FHJ7 346 aaPredicted RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 RGS7BPQ6MZT1 257 aaPredicted RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 RINLQ6ZS11 566 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 SLC15A3Q8IY34 581 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 OR56A1Q8NGH5 318 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 CPT1BQ92523 772 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 HVCN1Q96D96 273 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 RRP36Q96EU6 259 aaKnown RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 HIST1H2AAQ96QV6 131 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 TTPALQ9BTX7 342 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 UNKLQ9H9P5 680 aaKnown RBP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 NOD2Q9HC29 1040 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 PREBQ9HCU5 417 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 IRAK4Q9NWZ3 460 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 NFU1Q9UMS0 254 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 CNTN6Q9UQ52 1028 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.79□□□□□ -1.48
LINC00397-202ENST00000606785 AATKQ6ZMQ8 1374 aa5.79□□□□□ -1.48
LINC00397-202ENST00000606785 SPATA31A3Q5VYP0 1347 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 A0A1B0GTW7 788 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 CCDC78A2IDD5 438 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 LEFTY2O00292 366 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 KRT38O76015 456 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 HLA-DOAP06340 250 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 CSF1RP07333 972 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 CNPP09543 421 aaKnown RBP5.78□□□□□ -1.48
LINC00397-202ENST00000606785 FGFR4P22455 802 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 RBL1P28749 1068 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 SERPINA4P29622 427 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 UQCRC1P31930 480 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 MSX2P35548 267 aaPredicted RBP5.78□□□□□ -1.48
LINC00397-202ENST00000606785 NDUFV1P49821 464 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 CDK7P50613 346 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 FOXL1Q12952 345 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 FHL3Q13643 280 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 CSHL1Q14406 222 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 GPATCH4Q5T3I0 446 aaKnown RBP5.78□□□□□ -1.48
LINC00397-202ENST00000606785 C1QL3Q5VWW1 255 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 SLFN13Q68D06 897 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 CLNKQ7Z7G1 428 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 D2HGDHQ8N465 521 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 TCP11L2Q8N4U5 519 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.78□□□□□ -1.48
LINC00397-202ENST00000606785 Q8NA96 180 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 TMEM171Q8WVE6 324 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 MIEF2Q96C03 454 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 WDR24Q96S15 920 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 GPR20Q99678 358 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 GPR63Q9BZJ6 419 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 CHODLQ9H9P2 273 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 USP22Q9UPT9 525 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 DERAQ9Y315 318 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 RRP7AQ9Y3A4 280 aaKnown RBP5.78□□□□□ -1.48
LINC00397-202ENST00000606785 RABGAP1Q9Y3P9 1069 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 USP15Q9Y4E8 981 aaPredicted RBP5.78□□□□□ -1.48
LINC00397-202ENST00000606785 SLC30A1Q9Y6M5 507 aa5.78□□□□□ -1.48
LINC00397-202ENST00000606785 DIRC3C9JPN6 131 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 ADM5C9JUS6 153 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 F5H0A9 414 aaPredicted RBP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 RPP40O75818 363 aaKnown RBP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 RAD17O75943 681 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 GPANK1O95872 356 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 TFRCP02786 760 aaKnown RBP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 NTSR1P30989 418 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 KCNC1P48547 511 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 GATMP50440 423 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 CTSWP56202 376 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 ADAM17P78536 824 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 HSD11B2P80365 405 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 TIAL1Q01085 375 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 ANKRD1Q15327 319 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 KCNA10Q16322 511 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 NT5DC1Q5TFE4 455 aa5.77□□□□□ -1.49
LINC00397-202ENST00000606785 NAIF1Q69YI7 327 aaPredicted RBP5.77□□□□□ -1.49
LINC00397-202ENST00000606785 FOXR2Q6PJQ5 311 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms