RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 TXLNGYQ9BZA5 131 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 FOXP3Q9BZS1 431 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 CHRDQ9H2X0 955 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 PABPC3Q9H361 631 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 CNOT10Q9H9A5 744 aaKnown RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 IFT122Q9HBG6 1241 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 TMEM39AQ9NV64 488 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 SETD4Q9NVD3 440 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 PARVAQ9NVD7 372 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 WHRNQ9P202 907 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 IP6K2Q9UHH9 426 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 AKT3Q9Y243 479 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 TNFSF13BQ9Y275 285 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 ATG2AQ2TAZ0 1938 aa6.07□□□□□ -1.44
SDF2-206ENST00000587788 COL4A4P53420 1690 aaPredicted RBP6.07□□□□□ -1.44
SDF2-206ENST00000587788 TRIOBPQ9H2D6 2365 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 A0A1B0GUA9 196 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ZSCAN5CA6NGD5 496 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 TMEM110-MUSTN1A8MSY1 372 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 INO80B-WBP1J3KQ70 363 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 M0QZ92 97 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 EBAG9O00559 213 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 OGTO15294 1046 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 TLR3O15455 904 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 XYLBO75191 536 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 IL18RAPO95256 599 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ECEL1O95672 775 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 GAS8O95995 478 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 TIMP1P01033 207 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 CALB1P05937 261 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 PYGMP11217 842 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 CSF2RAP15509 400 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ITIH2P19823 946 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 NR1D1P20393 614 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ACO1P21399 889 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 EIF4BP23588 611 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 HOXC8P31273 242 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 BMP8BP34820 402 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ACOT2P49753 483 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 NLRP11P59045 1033 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 GNGT1P63211 74 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 DAB2P98082 770 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 MCL1Q07820 350 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 IFFO1Q0D2I5 559 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 BYSLQ13895 437 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 CAPSQ13938 189 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 SHHQ15465 462 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 LRRC38Q5VT99 294 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 DENND2CQ68D51 928 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 CCDC137Q6PK04 289 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 CRELD2Q6UXH1 353 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 TRMT10CQ7L0Y3 403 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 C16orf59Q7L2K0 433 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ZNF438Q7Z4V0 828 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 DNAAF5Q86Y56 855 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 RHOT1Q8IXI2 618 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 CCDC105Q8IYK2 499 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 KATNAL2Q8IYT4 538 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 LRRC71Q8N4P6 559 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 TTC39CQ8N584 583 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 PRELID2Q8N945 189 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ZSWIM2Q8NEG5 633 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 EXD1Q8NHP7 514 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ARL8AQ96BM9 186 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 CENPTQ96BT3 561 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ZBTB10Q96DT7 871 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 PGM2Q96G03 612 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 SCLYQ96I15 445 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 LBHD1Q9BQE6 289 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 ADPGKQ9BRR6 497 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 TARS2Q9BW92 718 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 FRMD8P1Q9BZ68 369 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 ROPN1BQ9BZX4 212 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 UBE2OQ9C0C9 1292 aaKnown RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 CCDC113Q9H0I3 377 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 HIPK3Q9H422 1215 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ROPN1Q9HAT0 212 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 PLEKHA5Q9HAU0 1116 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 PTPRHQ9HD43 1115 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 CHST12Q9NRB3 414 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 TOPORSQ9NS56 1045 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 ZDHHC18Q9NUE0 388 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 ADAM22Q9P0K1 906 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 PRKAG2Q9UGJ0 569 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 GTF2IRD1Q9UHL9 959 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 FOXD3Q9UJU5 478 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 ANAPC7Q9UJX3 599 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 CEP83Q9Y592 693 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 PCDHB4Q9Y5E5 795 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.06□□□□□ -1.44
SDF2-206ENST00000587788 NFS1Q9Y697 457 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 SQORQ9Y6N5 450 aa6.06□□□□□ -1.44
SDF2-206ENST00000587788 LAMA3Q16787 3333 aa6.05□□□□□ -1.44
SDF2-206ENST00000587788 ATXN2Q99700 1313 aaKnown RBP6.05□□□□□ -1.44
SDF2-206ENST00000587788 CNTNAP2Q9UHC6 1331 aa6.05□□□□□ -1.44
SDF2-206ENST00000587788 LAMA2P24043 3122 aaKnown RBP6.05□□□□□ -1.44
SDF2-206ENST00000587788 A0A087WZ62 844 aa6.05□□□□□ -1.44
SDF2-206ENST00000587788 MED7O43513 233 aa6.05□□□□□ -1.44
SDF2-206ENST00000587788 BNIP3LO60238 219 aa6.05□□□□□ -1.44
SDF2-206ENST00000587788 CPNE3O75131 537 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms