RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 CCDC81Q6ZN84 652 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 CACUL1Q86Y37 369 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 PTRH1Q86Y79 214 aaKnown RBP8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 TMEM25Q86YD3 366 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 SMC5Q8IY18 1101 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 CCDC148Q8NFR7 591 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 SPPL2BQ8TCT7 592 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 WBP2Q969T9 261 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 CCDC43Q96MW1 224 aaKnown RBP8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 GABRG3Q99928 467 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 LSG1Q9H089 658 aaKnown RBP8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 ZNF768Q9H5H4 540 aaKnown RBP8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 TM9SF3Q9HD45 589 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 ASCL3Q9NQ33 180 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 USP36Q9P275 1121 aaKnown RBP8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 CFAP97Q9P2B7 532 aa8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 PLEKHB1Q9UF11 243 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 SETD2Q9BYW2 2564 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1-211ENST00000578875 TLN1Q9Y490 2541 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 A0A1B0GTQ1 180 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 LACTBL1A8MY62 500 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 CCNT1O60563 726 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 MCF2P10911 925 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 CYP11B2P19099 503 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 PROZP22891 400 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 COL8A1P27658 744 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 AFF3P51826 1226 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 GABREP78334 506 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 AKAP17AQ02040 695 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 SRSF6Q13247 344 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 KCNB1Q14721 858 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 EARS2Q5JPH6 523 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 DHX32Q7L7V1 743 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 TRMT11Q7Z4G4 463 aaKnown RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 FAM26EQ8N5C1 309 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 MCPH1Q8NEM0 835 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 ENGASEQ8NFI3 743 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 KCNV2Q8TDN2 545 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 MYRFLQ96LU7 910 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 DPH1Q9BZG8 443 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 HAPLN2Q9GZV7 340 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 TTC12Q9H892 705 aaPredicted RBP8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 WDR70Q9NW82 654 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 DEC1Q9P2X7 70 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 KCNJ14Q9UNX9 436 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 STARD13Q9Y3M8 1113 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 PCDHB5Q9Y5E4 795 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 CPQQ9Y646 472 aa8.54□□□□□ -1.04
PPP4R1-211ENST00000578875 A0A1W2PNU3 283 aaPredicted RBP8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 TTC26A0AVF1 554 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 PMS2P1A4D2B8 440 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 CYB561D2O14569 222 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 HCRTO43612 131 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 USP12O75317 370 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 MED24O75448 989 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 ITGB2P05107 769 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 CYP11A1P05108 521 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 ITGAVP06756 1048 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 XRCC6P12956 609 aaKnown RBP eCLIP8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 ACSL1P33121 698 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 EFNA5P52803 228 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 USP46P62068 366 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 FOXK1P85037 733 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 GAD2Q05329 585 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 ZSCAN23Q3MJ62 389 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 SDE2Q6IQ49 451 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 CATSPER3Q86XQ3 398 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 TMPRSS6Q8IU80 811 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 TERB1Q8NA31 727 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 SAP25Q8TEE9 199 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 TRMT2BQ96GJ1 504 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 ORAI3Q9BRQ5 295 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 C22orf23Q9BZE7 217 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 EPN3Q9H201 632 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 NCOA5Q9HCD5 579 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 GJB4Q9NTQ9 266 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 PCDHA12Q9UN75 941 aa8.53□□□□□ -1.04
PPP4R1-211ENST00000578875 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.04
PPP4R1-211ENST00000578875 LRBAP50851 2863 aa8.52□□□□□ -1.04
PPP4R1-211ENST00000578875 ANK1P16157 1881 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 CCDC169A6NNP5 214 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 WNT9AO14904 365 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 PAPSS1O43252 624 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ADH1CP00326 375 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 WNT1P04628 370 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 CDK4P11802 303 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ODC1P11926 461 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ACAT1P24752 427 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 FOSBP53539 338 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 RPL10AP62906 217 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 CCT2P78371 535 aaKnown RBP8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ST3GAL1Q11201 340 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 ANO4Q32M45 955 aa8.52□□□□□ -1.05
PPP4R1-211ENST00000578875 TTC22Q5TAA0 569 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms