RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SLITRK1Q96PX8 696 aa15.53■□□□□ 0.08
FANCA-220ENST00000566409 HNRNPABQ99729 332 aaKnown RBP15.53■□□□□ 0.08
FANCA-220ENST00000566409 FAM126AQ9BYI3 521 aaPredicted RBP15.53■□□□□ 0.08
FANCA-220ENST00000566409 CYP3A43Q9HB55 503 aa15.53■□□□□ 0.08
FANCA-220ENST00000566409 SMPD4Q9NXE4 827 aa15.53■□□□□ 0.08
FANCA-220ENST00000566409 MAN1B1Q9UKM7 699 aa15.53■□□□□ 0.08
FANCA-220ENST00000566409 CPQQ9Y646 472 aa15.53■□□□□ 0.08
FANCA-220ENST00000566409 CACNA1AO00555 2505 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 HHLA1C9JL84 531 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 SCAMP3O14828 347 aaKnown RBP15.52■□□□□ 0.08
FANCA-220ENST00000566409 COCHO43405 550 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 EPB41P11171 864 aaKnown RBP15.52■□□□□ 0.08
FANCA-220ENST00000566409 CD58P19256 250 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 ADORA2BP29275 332 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 IFNAR2P48551 515 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 MXI1P50539 228 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 PDE6CP51160 858 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 MAP3K7CLP57077 242 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 FKBP3Q00688 224 aaKnown RBP15.52■□□□□ 0.08
FANCA-220ENST00000566409 CLEC20AQ6ZU45 233 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 GPRIN1Q7Z2K8 1008 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 FBXL13Q8NEE6 735 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 OVCA2Q8WZ82 227 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 TATDN2Q93075 761 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 ATP2A3Q93084 1043 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 ARID3AQ99856 593 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 P2RY13Q9BPV8 354 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 NT5C1AQ9BXI3 368 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 IMPG2Q9BZV3 1241 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 EPC1Q9H2F5 836 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 CCSER2Q9H7U1 834 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
FANCA-220ENST00000566409 RAB20Q9NX57 234 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 GMIPQ9P107 970 aa15.52■□□□□ 0.08
FANCA-220ENST00000566409 EML5Q05BV3 1969 aa15.52■□□□□ 0.07
FANCA-220ENST00000566409 GRSF1Q12849 480 aaKnown RBP eCLIP15.51■□□□□ 0.07
FANCA-220ENST00000566409 FILIP1Q7Z7B0 1213 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 ADGRG2Q8IZP9 1017 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 CPA6Q8N4T0 437 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 WBP2Q969T9 261 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 SLC35C1Q96A29 364 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 CYFIP2Q96F07 1278 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 DUSP9Q99956 384 aaKnown RBP15.51■□□□□ 0.07
FANCA-220ENST00000566409 COMMD8Q9NX08 183 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 CFAP97Q9P2B7 532 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 COQ4Q9Y3A0 265 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 SPAG17Q6Q759 2223 aa15.51■□□□□ 0.07
FANCA-220ENST00000566409 ANTXRLA6NF34 631 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 CHURC1-FNTBB4DL54 471 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 PPP1R3GB7ZBB8 358 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 SLC16A3O15427 465 aaKnown RBP15.5■□□□□ 0.07
FANCA-220ENST00000566409 FAM200BP0CF97 657 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 MBL2P11226 248 aaPredicted RBP15.5■□□□□ 0.07
FANCA-220ENST00000566409 OPRD1P41143 372 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 FNTBP49356 437 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 NRLP54845 237 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 LRRC63Q05C16 580 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 ZNF394Q53GI3 561 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 HECTD3Q5T447 861 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 PPP1R26Q5T8A7 1209 aaPredicted RBP15.5■□□□□ 0.07
FANCA-220ENST00000566409 SLC4A11Q8NBS3 891 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 PDZD8Q8NEN9 1154 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 RUBCNQ92622 972 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 TSG101Q99816 390 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 CISHQ9NSE2 258 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 OSER1Q9NX31 292 aa15.5■□□□□ 0.07
FANCA-220ENST00000566409 MYO18AQ92614 2054 aaKnown RBP15.5■□□□□ 0.07
FANCA-220ENST00000566409 HRO43593 1189 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 STX10O60499 249 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 RNF40O75150 1001 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 TBX18O95935 607 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 CYP17A1P05093 508 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 DRD1P21728 446 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 TUBP50607 506 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 RAD23BP54727 409 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 AMPD2Q01433 879 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 MESP2Q0VG99 397 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 SRSF5Q13243 272 aaKnown RBP15.49■□□□□ 0.07
FANCA-220ENST00000566409 MORC3Q14149 939 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 PPP2R5DQ14738 602 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 DCAF17Q5H9S7 520 aaPredicted RBP15.49■□□□□ 0.07
FANCA-220ENST00000566409 TCERG1LQ5VWI1 586 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 RHBDF2Q6PJF5 856 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 KIAA1958Q8N8K9 716 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 CCDC150Q8NCX0 1101 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 CD101Q93033 1021 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 JAKMIP2Q96AA8 810 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 DHTKD1Q96HY7 919 aaPredicted RBP15.49■□□□□ 0.07
FANCA-220ENST00000566409 FAXDC2Q96IV6 333 aa15.49■□□□□ 0.07
FANCA-220ENST00000566409 HOOK1Q9UJC3 728 aaKnown RBP15.49■□□□□ 0.07
FANCA-220ENST00000566409 CIZ1Q9ULV3 898 aaPredicted RBP15.49■□□□□ 0.07
FANCA-220ENST00000566409 SMG5Q9UPR3 1016 aaKnown RBP15.49■□□□□ 0.07
FANCA-220ENST00000566409 CYP26A1O43174 497 aa15.48■□□□□ 0.07
FANCA-220ENST00000566409 GREM1O60565 184 aa15.48■□□□□ 0.07
FANCA-220ENST00000566409 NFATC1O95644 943 aa15.48■□□□□ 0.07
FANCA-220ENST00000566409 HOXA6P31267 233 aa15.48■□□□□ 0.07
FANCA-220ENST00000566409 DHCR24Q15392 516 aa15.48■□□□□ 0.07
FANCA-220ENST00000566409 HEATR6Q6AI08 1181 aaKnown RBP15.48■□□□□ 0.07
FANCA-220ENST00000566409 TTI2Q6NXR4 508 aa15.48■□□□□ 0.07
FANCA-220ENST00000566409 KIAA2013Q8IYS2 634 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms