RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FSTL4Q6MZW2 842 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 MAMSTRQ6ZN01 415 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 EHBP1Q8NDI1 1231 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 SEMA4DQ92854 862 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 FAM81BQ96LP2 452 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 MYRFLQ96LU7 910 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 TSPY26PQ9H489 355 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 ABCB6Q9NP58 842 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 NCDNQ9UBB6 729 aa16.63■□□□□ 0.25
USB1-208ENST00000563207 LIMA1Q9UHB6 759 aaKnown RBP16.63■□□□□ 0.25
USB1-208ENST00000563207 TBXAS1P24557 533 aaPredicted RBP16.62■□□□□ 0.25
USB1-208ENST00000563207 PXNP49023 591 aaPredicted RBP16.62■□□□□ 0.25
USB1-208ENST00000563207 CCR3P51677 355 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 RPL10AP62906 217 aaKnown RBP16.62■□□□□ 0.25
USB1-208ENST00000563207 CYP27A1Q02318 531 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 RUNX3Q13761 415 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 KRT31Q15323 416 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 CFAP221Q4G0U5 840 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 HSP90AA4PQ58FG1 418 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 MIIPQ5JXC2 388 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 GBP6Q6ZN66 633 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 SPEM1Q8N4L4 309 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 ARL14EPQ8N8R7 260 aaPredicted RBP16.62■□□□□ 0.25
USB1-208ENST00000563207 MRPS31Q92665 395 aaKnown RBP16.62■□□□□ 0.25
USB1-208ENST00000563207 PCED1BQ96HM7 432 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 NIF3L1Q9GZT8 377 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 SNX25Q9H3E2 840 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 PARD6AQ9NPB6 346 aa16.62■□□□□ 0.25
USB1-208ENST00000563207 HELZP42694 1942 aaKnown RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 TRIM21P19474 475 aaKnown RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 GNL1P36915 607 aaPredicted RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 CDH8P55286 799 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 YWHAEP62258 255 aaKnown RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 EXOC3L4Q17RC7 722 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 MDH1BQ5I0G3 518 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 UNC93AQ86WB7 457 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 EZH1Q92800 747 aaPredicted RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 TRMT2BQ96GJ1 504 aaKnown RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 NT5C1BQ96P26 610 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 HSD3B7Q9H2F3 369 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 LINC00597Q9H2U6 94 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 APOBEC3GQ9HC16 384 aaKnown RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 THG1LQ9NWX6 298 aaKnown RBP16.61■□□□□ 0.25
USB1-208ENST00000563207 GCNT4Q9P109 453 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 CDH9Q9ULB4 789 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 WNT6Q9Y6F9 365 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 MYO16Q9Y6X6 1858 aa16.61■□□□□ 0.25
USB1-208ENST00000563207 CLDN5O00501 218 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 SCAMP3O14828 347 aaKnown RBP16.6■□□□□ 0.25
USB1-208ENST00000563207 EGFP01133 1207 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 GRIK1P39086 918 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 ASPAP45381 313 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 RAP1GAPP47736 663 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 GALK1P51570 392 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 PLCB2Q00722 1185 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 INCA1Q0VD86 236 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 LRRC32Q14392 662 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 MAPRE1Q15691 268 aaKnown RBP16.6■□□□□ 0.25
USB1-208ENST00000563207 ZNF77Q15935 545 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 SPOPLQ6IQ16 392 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 PRR23BQ6ZRT6 265 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 OR6B3Q8NGW1 331 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 JAKMIP2Q96AA8 810 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 SDCBP2Q9H190 292 aa16.6■□□□□ 0.25
USB1-208ENST00000563207 EML5Q05BV3 1969 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 MED19A0JLT2 244 aaPredicted RBP16.59■□□□□ 0.25
USB1-208ENST00000563207 PES1O00541 588 aaKnown RBP16.59■□□□□ 0.25
USB1-208ENST00000563207 DDX6P26196 483 aaKnown RBP eCLIP16.59■□□□□ 0.25
USB1-208ENST00000563207 MAGEA11P43364 429 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
USB1-208ENST00000563207 GCNT1Q02742 428 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 SPEM2Q0P670 501 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 MTF1Q14872 753 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 RSPO4Q2I0M5 234 aaPredicted RBP16.59■□□□□ 0.25
USB1-208ENST00000563207 TMEM196Q5HYL7 178 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 DGKKQ5KSL6 1271 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 FKBP15Q5T1M5 1219 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 ENOSF1Q7L5Y1 443 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 TATDN2Q93075 761 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 MSANTD3Q96H12 275 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 FUBP3Q96I24 572 aaKnown RBP eCLIP16.59■□□□□ 0.25
USB1-208ENST00000563207 TNIP3Q96KP6 325 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 B3GNT5Q9BYG0 378 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 FAM126AQ9BYI3 521 aaPredicted RBP16.59■□□□□ 0.25
USB1-208ENST00000563207 ZNF518BQ9C0D4 1074 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 RNF38Q9H0F5 515 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 VPS16Q9H269 839 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 SMYD3Q9H7B4 428 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 TAB2Q9NYJ8 693 aa16.59■□□□□ 0.25
USB1-208ENST00000563207 A8MXQ7 604 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 F8VP50 259 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 CKMP06732 381 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 PTPN1P18031 435 aaKnown RBP16.58■□□□□ 0.24
USB1-208ENST00000563207 GJA4P35212 333 aa16.58■□□□□ 0.24
USB1-208ENST00000563207 CUL2Q13617 745 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms