RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TRIM62Q9BVG3 475 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 TMEM106CQ9BVX2 250 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 ACBD3Q9H3P7 528 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 DMAP1Q9NPF5 467 aaPredicted RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 ADAM28Q9UKQ2 775 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 STAP1Q9ULZ2 295 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 PRG3Q9Y2Y8 225 aaPredicted RBP14.43□□□□□ -0.1
TPM1-215ENST00000558868 NR2E1Q9Y466 385 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 TSC2P49815 1807 aa14.43□□□□□ -0.1
TPM1-215ENST00000558868 SF3B1O75533 1304 aaKnown RBP eCLIP14.42□□□□□ -0.19e-6■■■■■ 68.9
TPM1-215ENST00000558868 hCG_1818297A0A087WSY0 165 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 CARNS1A5YM72 827 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 OR6C75A6NL08 312 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 TBKBP1A7MCY6 615 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 BHMG1C9JSJ3 638 aaPredicted RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 NRP1O14786 923 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 TTI1O43156 1089 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 ECEL1O95672 775 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 GAS8O95995 478 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 ITGB1P05556 798 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 KDELR1P24390 212 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 NOS2P35228 1153 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 MATKP42679 507 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 CDKN2BP42772 138 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 TKTL1P51854 596 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 DRG2P55039 364 aaKnown RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 YWHAZP63104 245 aaKnown RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 KLF1Q13351 362 aaPredicted RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 PDK2Q15119 407 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 RAB41Q5JT25 222 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 MFSD7Q6UXD7 560 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 STRADAQ7RTN6 431 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 NECAB2Q7Z6G3 386 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 VSIG1Q86XK7 387 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 JAMLQ86YT9 394 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 CRIPAKQ8N1N5 446 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 SCML4Q8N228 414 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 ARFGAP1Q8N6T3 406 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 TTC13Q8NBP0 860 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 DIS3LQ8TF46 1054 aaKnown RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 FAM172AQ8WUF8 416 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 IFT81Q8WYA0 676 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 IRGQQ8WZA9 623 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 SEC14L1Q92503 715 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 PIWIL1Q96J94 861 aaKnown RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 PKMYT1Q99640 499 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 ERP44Q9BS26 406 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 HEMGNQ9BXL5 484 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 DCLK3Q9C098 648 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 NGRNQ9NPE2 291 aaKnown RBP14.42□□□□□ -0.1
TPM1-215ENST00000558868 ZNF446Q9NWS9 450 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 RRN3Q9NYV6 651 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 DNAJB4Q9UDY4 337 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 PCSK1NQ9UHG2 260 aa14.42□□□□□ -0.1
TPM1-215ENST00000558868 TTC3P53804 2025 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 ABHD14A-ACY1A0A1B0GW23 586 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 TCRBV7S2A1N4TA0A589 114 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 PI4K2BG5E9Z4 385 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 H7C4K7 107 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 B4GALT3O60512 393 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 BEST1O76090 585 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 SEC31AO94979 1220 aaKnown RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 TCF4P15884 667 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 PTGIRP43119 386 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 TNNT3P45378 269 aaPredicted RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 MRPS25P82663 173 aaKnown RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 ATP11AP98196 1134 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 ADCY1Q08828 1119 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 SMARCB1Q12824 385 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 TAF5Q15542 800 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 TAZQ16635 292 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 TCTN1Q2MV58 587 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 C15orf59Q2T9L4 293 aaPredicted RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 SLC25A52Q3SY17 297 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 ATP13A4Q4VNC1 1196 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 ZNF280DQ6N043 979 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 TRNP1Q6NT89 227 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 OR10T2Q8NGX3 314 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 ATL2Q8NHH9 583 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 AENQ8WTP8 325 aaKnown RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 CASKIN2Q8WXE0 1202 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 RAPGEF5Q92565 580 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 CENPIQ92674 756 aaPredicted RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 CAVIN3Q969G5 261 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 FAM149B1Q96BN6 582 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 FUBP3Q96I24 572 aaKnown RBP eCLIP14.41□□□□□ -0.1
TPM1-215ENST00000558868 PAWRQ96IZ0 340 aaKnown RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 CFAP57Q96MR6 1250 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 MAK16Q9BXY0 300 aaKnown RBP14.41□□□□□ -0.1
TPM1-215ENST00000558868 FAM129AQ9BZQ8 928 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 ZCWPW1Q9H0M4 648 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 POPDC2Q9HBU9 364 aa14.41□□□□□ -0.1
TPM1-215ENST00000558868 ZNF487B1APH4 448 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 MDM4O15151 490 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 ZBED1O96006 694 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 TIMP1P01033 207 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 AMHP03971 560 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 BDNFP23560 247 aa14.4□□□□□ -0.1
TPM1-215ENST00000558868 IL1R2P27930 398 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms