RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 LENG9Q96B70 501 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 HIST1H2AAQ96QV6 131 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 WDR24Q96S15 920 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 PAGR1Q9BTK6 254 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 FSCN3Q9NQT6 498 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 HELLSQ9NRZ9 838 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 COL15A1P39059 1388 aa6.04□□□□□ -1.44
SYNE2-210ENST00000553455 FCHO1O14526 889 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 NPHP1O15259 732 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 CCNT2O60583 730 aaKnown RBP6.03□□□□□ -1.44
SYNE2-210ENST00000553455 PPFIA4O75335 1185 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 PEX11BO96011 259 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 VIPP01282 170 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 ANXA6P08133 673 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 ITGA2BP08514 1039 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 KLRK1P26718 216 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 RBL1P28749 1068 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 EPHA3P29320 983 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 GATMP50440 423 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 TIRAPP58753 221 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 TAF5Q15542 800 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 TIGD6Q17RP2 521 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 TIGD2Q4W5G0 525 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 VWA1Q6PCB0 445 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 RASGRP3Q8IV61 690 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 METTL25Q8N6Q8 603 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 SUN3Q8TAQ9 357 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 ATRIPQ8WXE1 791 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 GLG1Q92896 1179 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 GRAMD1AQ96CP6 724 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 PTCD3Q96EY7 689 aaKnown RBP6.03□□□□□ -1.44
SYNE2-210ENST00000553455 PLEKHG4BQ96PX9 1271 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 VN1R3Q9BXE9 311 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 INO80BQ9C086 356 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-210ENST00000553455 EPS8L2Q9H6S3 715 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 ANKFY1Q9P2R3 1169 aa6.03□□□□□ -1.44
SYNE2-210ENST00000553455 SRP68Q9UHB9 627 aaKnown RBP6.03□□□□□ -1.44
SYNE2-210ENST00000553455 HERC5Q9UII4 1024 aaKnown RBP6.03□□□□□ -1.44
SYNE2-210ENST00000553455 ADGRA2Q96PE1 1338 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 VWC2LB2RUY7 222 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 J3KTA2 159 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 DNPH1O43598 174 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 SRGAP2BP0DMP2 458 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 EGR2P11161 476 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-210ENST00000553455 ALDH18A1P54886 795 aaKnown RBP6.02□□□□□ -1.45
SYNE2-210ENST00000553455 ARL4CP56559 192 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 DGCR2P98153 550 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 ITIH3Q06033 890 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 EIF2B5Q13144 721 aaKnown RBP6.02□□□□□ -1.45
SYNE2-210ENST00000553455 GRM4Q14833 912 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 RFX8Q6ZV50 586 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 SCAMP5Q8TAC9 235 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 SOCS4Q8WXH5 440 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 HAPLN3Q96S86 360 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 GPR20Q99678 358 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 PABPC3Q9H361 631 aaKnown RBP6.02□□□□□ -1.45
SYNE2-210ENST00000553455 PRDM8Q9NQV8 689 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 TBCCD1Q9NVR7 557 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 GTF2A1LQ9UNN4 478 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 DRG1Q9Y295 367 aaKnown RBP6.02□□□□□ -1.45
SYNE2-210ENST00000553455 SLC27A6Q9Y2P4 619 aa6.02□□□□□ -1.45
SYNE2-210ENST00000553455 WDR27A2RRH5 827 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 ACTL6BO94805 426 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 ITGAMP11215 1152 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 CLCN2P51788 898 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 NXPH1P58417 271 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 CLCA4Q14CN2 919 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 KLHL17Q6TDP4 642 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 CLEC9AQ6UXN8 241 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 SLC44A2Q8IWA5 706 aaPredicted RBP6.01□□□□□ -1.45
SYNE2-210ENST00000553455 ABHD5Q8WTS1 349 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 TRIM63Q969Q1 353 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 RILPL2Q969X0 211 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 FKBP10Q96AY3 582 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 RTKNQ9BST9 563 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 DDX23Q9BUQ8 820 aaKnown RBP6.01□□□□□ -1.45
SYNE2-210ENST00000553455 MLST8Q9BVC4 326 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 ZCWPW1Q9H0M4 648 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 NRDE2Q9H7Z3 1164 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 GLOD4Q9HC38 313 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 KCTD5Q9NXV2 234 aa6.01□□□□□ -1.45
SYNE2-210ENST00000553455 A1L4Q6 167 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 PIPSLA2A3N6 862 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 SLC16A3O15427 465 aaKnown RBP6□□□□□ -1.45
SYNE2-210ENST00000553455 ZSCAN9O15535 394 aaPredicted RBP6□□□□□ -1.45
SYNE2-210ENST00000553455 SNX2O60749 519 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 TAF5LO75529 589 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 FAM155BO75949 473 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 CST5P28325 142 aaPredicted RBP6□□□□□ -1.45
SYNE2-210ENST00000553455 LIPAP38571 399 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 POLE2P56282 527 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 POU5F1BQ06416 359 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 MTAPQ13126 283 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 ACOX1Q15067 660 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 CYP26C1Q6V0L0 522 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 MRGPREQ86SM8 312 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 MOGAT3Q86VF5 341 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 CAND1Q86VP6 1230 aaKnown RBP6□□□□□ -1.45
SYNE2-210ENST00000553455 ANKRD18AQ8IVF6 992 aa6□□□□□ -1.45
SYNE2-210ENST00000553455 C11orf44Q8N8P7 122 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms