RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TUBP50607 506 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 CYP4F8P98187 520 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 GPR158Q5T848 1215 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 MON1AQ86VX9 555 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 UBA3Q8TBC4 463 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 EPS8L1Q8TE68 723 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 SECISBP2LQ93073 1101 aaKnown RBP20.48■□□□□ 0.87
DDX55-207ENST00000540763 E2F7Q96AV8 911 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 MCRS1Q96EZ8 462 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 ASB16Q96NS5 453 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 XPO4Q9C0E2 1151 aaKnown RBP20.48■□□□□ 0.87
DDX55-207ENST00000540763 LHX5Q9H2C1 402 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 SLITRK6Q9H5Y7 841 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 ACP6Q9NPH0 428 aa20.48■□□□□ 0.87
DDX55-207ENST00000540763 A0A1W2PQJ5 194 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 ZNF840PA6NDX5 716 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 CALCAP01258 141 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 CCDC172P0C7W6 258 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 KRT9P35527 623 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 PSEN1P49768 467 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 IFRD2Q12894 506 aaPredicted RBP20.47■□□□□ 0.87
DDX55-207ENST00000540763 HTR4Q13639 388 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 ZSCAN18Q8TBC5 510 aaPredicted RBP20.47■□□□□ 0.87
DDX55-207ENST00000540763 BAP1Q92560 729 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 SMARCD2Q92925 531 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 LRRC4Q9HBW1 653 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 TLR8Q9NR97 1041 aaKnown RBP20.47■□□□□ 0.87
DDX55-207ENST00000540763 OBP2AQ9NY56 170 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 CEP83Q9Y592 693 aa20.47■□□□□ 0.87
DDX55-207ENST00000540763 MUC6Q6W4X9 2439 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 TULP2O00295 520 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 ECI2O75521 394 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 GFPT2O94808 682 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 OLFM2O95897 454 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 ACADSBP45954 432 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 STXBP5Q5T5C0 1151 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 PM20D1Q6GTS8 502 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 POTEHQ6S545 545 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 ZNF276Q8N554 614 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 DDX1Q92499 740 aaKnown RBP20.46■□□□□ 0.87
DDX55-207ENST00000540763 RBSNQ9H1K0 784 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 CNGB3Q9NQW8 809 aa20.46■□□□□ 0.87
DDX55-207ENST00000540763 LSM8O95777 96 aaKnown RBP20.45■□□□□ 0.86
DDX55-207ENST00000540763 OAS1P00973 400 aaKnown RBP20.45■□□□□ 0.86
DDX55-207ENST00000540763 ALADP13716 330 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 FERP16591 822 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 FCARP24071 287 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 CDH5P33151 784 aaPredicted RBP20.45■□□□□ 0.86
DDX55-207ENST00000540763 TKTL1P51854 596 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 ZNF268Q14587 947 aaPredicted RBP20.45■□□□□ 0.86
DDX55-207ENST00000540763 FAM78AQ5JUQ0 283 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 PMF1Q6P1K2 205 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 DENND1BQ6P3S1 775 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 GAS2L3Q86XJ1 694 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 RNF135Q8IUD6 432 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 CMTM8Q8IZV2 173 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 ARHGAP18Q8N392 663 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 ELSPBP1Q96BH3 223 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 ZSWIM3Q96MP5 696 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 SLC46A2Q9BY10 475 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 NUCKS1Q9H1E3 243 aaKnown RBP20.45■□□□□ 0.86
DDX55-207ENST00000540763 KIF9Q9HAQ2 790 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 KCNK12Q9HB15 430 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 ZFP14Q9HCL3 533 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 GMIPQ9P107 970 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 LIMD1Q9UGP4 676 aa20.45■□□□□ 0.86
DDX55-207ENST00000540763 NOCTQ9UK39 431 aaKnown RBP20.45■□□□□ 0.86
DDX55-207ENST00000540763 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.45■□□□□ 0.865e-8■■□□□ 12.9
DDX55-207ENST00000540763 TRAV19A0A0A6YYK7 116 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 PRR33A8MZF0 331 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 FBXO21O94952 628 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 ZBED1O96006 694 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 USP17L7P0C7H9 530 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
DDX55-207ENST00000540763 AVPR1AP37288 418 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 ADIGQ0VDE8 80 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 TRIM14Q14142 442 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 TXNDC8Q6A555 127 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 NOP9Q86U38 636 aaKnown RBP20.44■□□□□ 0.86
DDX55-207ENST00000540763 SIX6OS1Q8N1H7 587 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 MAB21L3Q8N8X9 362 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 IRGQQ8WZA9 623 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 FGF14Q92915 247 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 NOX5Q96PH1 765 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 SLC4A5Q9BY07 1137 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 CLIC5Q9NZA1 410 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 SORCS3Q9UPU3 1222 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 NUMBLQ9Y6R0 609 aa20.44■□□□□ 0.86
DDX55-207ENST00000540763 TCF3P15923 654 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 SNX16P57768 344 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 CDR2Q01850 454 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 PDCLQ13371 301 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 PTPN21Q16825 1174 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 KLHDC10Q6PID8 442 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 PARM1Q6UWI2 310 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 TRIM72Q6ZMU5 477 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 TMEM110Q86TL2 294 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 ARID3BQ8IVW6 561 aaPredicted RBP20.43■□□□□ 0.86
DDX55-207ENST00000540763 TMEM35BQ8NCS4 154 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 DEPDC1BQ8WUY9 529 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms